RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 C9orf163Q8N9P6 203 aa1.99□□□□□ -2.09
TRIM4-205ENST00000496896 CENPEQ02224 2701 aa1.99□□□□□ -2.09
TRIM4-205ENST00000496896 GCN1Q92616 2671 aaKnown RBP1.99□□□□□ -2.09
TRIM4-205ENST00000496896 MTORP42345 2549 aa1.98□□□□□ -2.09
TRIM4-205ENST00000496896 ZNF469Q96JG9 3925 aaPredicted RBP1.98□□□□□ -2.09
TRIM4-205ENST00000496896 CSMD2Q7Z408 3487 aa1.98□□□□□ -2.09
TRIM4-205ENST00000496896 A0A087WSZ3 146 aa1.98□□□□□ -2.09
TRIM4-205ENST00000496896 ASB16-AS1Q495Z4 193 aa1.98□□□□□ -2.09
TRIM4-205ENST00000496896 ATP11AUNQ6ZP68 121 aa1.98□□□□□ -2.09
TRIM4-205ENST00000496896 ST20-AS1Q8NBB2 130 aa1.98□□□□□ -2.09
TRIM4-205ENST00000496896 LINC00472Q9H8W2 130 aa1.98□□□□□ -2.09
TRIM4-205ENST00000496896 ZNF706Q9Y5V0 76 aaPredicted RBP1.98□□□□□ -2.09
TRIM4-205ENST00000496896 SETD2Q9BYW2 2564 aaPredicted RBP1.98□□□□□ -2.09
TRIM4-205ENST00000496896 PDZD2O15018 2839 aa1.97□□□□□ -2.09
TRIM4-205ENST00000496896 NDUFS5O43920 106 aa1.97□□□□□ -2.09
TRIM4-205ENST00000496896 CD164Q04900 197 aa1.97□□□□□ -2.09
TRIM4-205ENST00000496896 NF1P21359 2839 aa1.97□□□□□ -2.09
TRIM4-205ENST00000496896 A0A096LNI7 61 aa1.96□□□□□ -2.1
TRIM4-205ENST00000496896 MMP24-AS1A0A0U1RRL7 71 aa1.96□□□□□ -2.1
TRIM4-205ENST00000496896 A0A1B0GVX0 72 aa1.96□□□□□ -2.1
TRIM4-205ENST00000496896 SEC61GP60059 68 aa1.96□□□□□ -2.1
TRIM4-205ENST00000496896 Q5VV11 94 aa1.96□□□□□ -2.1
TRIM4-205ENST00000496896 WFDC13Q8IUB5 93 aa1.96□□□□□ -2.1
TRIM4-205ENST00000496896 SMR3AQ99954 134 aa1.96□□□□□ -2.1
TRIM4-205ENST00000496896 RETNQ9HD89 108 aa1.96□□□□□ -2.1
TRIM4-205ENST00000496896 ANK3Q12955 4377 aaKnown RBP1.96□□□□□ -2.1
TRIM4-205ENST00000496896 UNC79Q9P2D8 2635 aa1.96□□□□□ -2.1
TRIM4-205ENST00000496896 ACANP16112 2415 aa1.96□□□□□ -2.1
TRIM4-205ENST00000496896 KRTAP12-4P60329 112 aa1.95□□□□□ -2.1
TRIM4-205ENST00000496896 PRLHP81277 87 aa1.95□□□□□ -2.1
TRIM4-205ENST00000496896 PHF5AQ7RTV0 110 aaKnown RBP1.95□□□□□ -2.1
TRIM4-205ENST00000496896 KTN1-AS1Q86SY8 53 aa1.95□□□□□ -2.1
TRIM4-205ENST00000496896 COA5Q86WW8 74 aa1.95□□□□□ -2.1
TRIM4-205ENST00000496896 CDC42SE1Q9NRR8 79 aa1.95□□□□□ -2.1
TRIM4-205ENST00000496896 LINC01558Q9Y6Z2 57 aa1.95□□□□□ -2.1
TRIM4-205ENST00000496896 NSD1Q96L73 2696 aaPredicted RBP1.94□□□□□ -2.1
TRIM4-205ENST00000496896 NIPBLQ6KC79 2804 aaeCLIP1.94□□□□□ -2.1
TRIM4-205ENST00000496896 A0A1W2PNN7 141 aa1.94□□□□□ -2.1
TRIM4-205ENST00000496896 A8MUN3 132 aa1.94□□□□□ -2.1
TRIM4-205ENST00000496896 C8orf87E5RJ46 101 aa1.94□□□□□ -2.1
TRIM4-205ENST00000496896 CHKB-CPT1BH3BT56 60 aa1.94□□□□□ -2.1
TRIM4-205ENST00000496896 PSPHP1O15172 72 aa1.94□□□□□ -2.1
TRIM4-205ENST00000496896 PRR15LQ9BU68 103 aa1.94□□□□□ -2.1
TRIM4-205ENST00000496896 C8orf17Q9NRJ1 99 aa1.94□□□□□ -2.1
TRIM4-205ENST00000496896 PLAC8Q9NZF1 115 aa1.94□□□□□ -2.1
TRIM4-205ENST00000496896 NBEAL2Q6ZNJ1 2754 aa1.93□□□□□ -2.1
TRIM4-205ENST00000496896 TEP1Q99973 2627 aaKnown RBP1.93□□□□□ -2.1
TRIM4-205ENST00000496896 IGKV2-24A0A0C4DH68 120 aa1.93□□□□□ -2.1
TRIM4-205ENST00000496896 A6NED7 52 aa1.93□□□□□ -2.1
TRIM4-205ENST00000496896 NUPR2A6NF83 97 aa1.93□□□□□ -2.1
TRIM4-205ENST00000496896 UBE2DNLQ8IWF7 75 aa1.93□□□□□ -2.1
TRIM4-205ENST00000496896 MRPL34Q9BQ48 92 aaKnown RBP1.93□□□□□ -2.1
TRIM4-205ENST00000496896 CRCT1Q9UGL9 99 aa1.93□□□□□ -2.1
TRIM4-205ENST00000496896 HIVEP1P15822 2718 aa1.93□□□□□ -2.1
TRIM4-205ENST00000496896 CUBNO60494 3623 aa1.92□□□□□ -2.1
TRIM4-205ENST00000496896 ACYP2P14621 99 aa1.92□□□□□ -2.1
TRIM4-205ENST00000496896 SPACA4Q8TDM5 124 aa1.92□□□□□ -2.1
TRIM4-205ENST00000496896 Q96NJ1 140 aa1.92□□□□□ -2.1
TRIM4-205ENST00000496896 ITPR2Q14571 2701 aa1.91□□□□□ -2.1
TRIM4-205ENST00000496896 NBDYA0A0U1RRE5 68 aa1.91□□□□□ -2.1
TRIM4-205ENST00000496896 C7orf65Q6ZTY9 151 aa1.91□□□□□ -2.1
TRIM4-205ENST00000496896 SSBP3-AS1Q7Z2R9 100 aa1.91□□□□□ -2.1
TRIM4-205ENST00000496896 APLNQ9ULZ1 77 aa1.91□□□□□ -2.1
TRIM4-205ENST00000496896 ATRQ13535 2644 aa1.91□□□□□ -2.1
TRIM4-205ENST00000496896 FASNP49327 2511 aaKnown RBP1.91□□□□□ -2.1
TRIM4-205ENST00000496896 FBN1P35555 2871 aaKnown RBP1.91□□□□□ -2.1
TRIM4-205ENST00000496896 HMCN1Q96RW7 5635 aa1.9□□□□□ -2.1
TRIM4-205ENST00000496896 VWFP04275 2813 aa1.9□□□□□ -2.11
TRIM4-205ENST00000496896 A6NN06 94 aa1.9□□□□□ -2.11
TRIM4-205ENST00000496896 K7EIL1 84 aa1.9□□□□□ -2.11
TRIM4-205ENST00000496896 LINC00304Q8N9R0 145 aa1.9□□□□□ -2.11
TRIM4-205ENST00000496896 HELZ2Q9BYK8 2649 aaKnown RBP1.89□□□□□ -2.11
TRIM4-205ENST00000496896 TENM4Q6N022 2769 aa1.89□□□□□ -2.11
TRIM4-205ENST00000496896 IGHV6-1A0A0B4J1U7 121 aa1.89□□□□□ -2.11
TRIM4-205ENST00000496896 HRES1P13985 223 aa1.89□□□□□ -2.11
TRIM4-205ENST00000496896 Q6ZRN7 208 aaPredicted RBP1.89□□□□□ -2.11
TRIM4-205ENST00000496896 LCA10Q71F78 164 aa1.89□□□□□ -2.11
TRIM4-205ENST00000496896 DMAC1Q96GE9 116 aa1.89□□□□□ -2.11
TRIM4-205ENST00000496896 DNAH3Q8TD57 4116 aa1.89□□□□□ -2.11
TRIM4-205ENST00000496896 DNAH1Q9P2D7 4330 aa1.88□□□□□ -2.11
TRIM4-205ENST00000496896 KRTAP12-3P60328 96 aa1.88□□□□□ -2.11
TRIM4-205ENST00000496896 SPAG11AQ6PDA7 123 aa1.88□□□□□ -2.11
TRIM4-205ENST00000496896 SPTSSBQ8NFR3 76 aa1.88□□□□□ -2.11
TRIM4-205ENST00000496896 TENM1Q9UKZ4 2725 aa1.88□□□□□ -2.11
TRIM4-205ENST00000496896 OTOGQ6ZRI0 2925 aa1.87□□□□□ -2.11
TRIM4-205ENST00000496896 A0A087WTM6 91 aa1.87□□□□□ -2.11
TRIM4-205ENST00000496896 A0A0G2JQZ4 141 aa1.87□□□□□ -2.11
TRIM4-205ENST00000496896 A8MUU9 505 aa1.87□□□□□ -2.11
TRIM4-205ENST00000496896 PCOTHQ58A44 107 aa1.87□□□□□ -2.11
TRIM4-205ENST00000496896 KRTAP4-1Q9BYQ7 146 aa1.87□□□□□ -2.11
TRIM4-205ENST00000496896 PSORS1C2Q9UIG4 136 aa1.87□□□□□ -2.11
TRIM4-205ENST00000496896 TENM3Q9P273 2699 aa1.86□□□□□ -2.11
TRIM4-205ENST00000496896 TRRAPQ9Y4A5 3859 aa1.86□□□□□ -2.11
TRIM4-205ENST00000496896 UQCR11O14957 56 aa1.86□□□□□ -2.11
TRIM4-205ENST00000496896 IGLV7-43P04211 117 aa1.86□□□□□ -2.11
TRIM4-205ENST00000496896 LINC00313P59037 77 aa1.86□□□□□ -2.11
TRIM4-205ENST00000496896 SPATA8Q6RVD6 105 aa1.86□□□□□ -2.11
TRIM4-205ENST00000496896 RBM12B-AS1Q9P1G2 102 aa1.86□□□□□ -2.11
TRIM4-205ENST00000496896 ANK2Q01484 3957 aa1.85□□□□□ -2.11
TRIM4-205ENST00000496896 MAST4O15021 2626 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms