RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 MT1HL1P0DM35 61 aa9.57□□□□□ -0.88
CBX4-204ENST00000495122 KLKP1Q107X0 134 aa9.57□□□□□ -0.88
CBX4-204ENST00000495122 ANAPC11Q9NYG5 84 aa9.57□□□□□ -0.88
CBX4-204ENST00000495122 TNXBP22105 4242 aa9.57□□□□□ -0.88
CBX4-204ENST00000495122 SPINK6Q6UWN8 80 aa9.56□□□□□ -0.88
CBX4-204ENST00000495122 Q96NJ1 140 aa9.56□□□□□ -0.88
CBX4-204ENST00000495122 Q5XG85 94 aa9.55□□□□□ -0.88
CBX4-204ENST00000495122 NDUFC1O43677 76 aa9.54□□□□□ -0.88
CBX4-204ENST00000495122 TMEM258P61165 79 aa9.54□□□□□ -0.88
CBX4-204ENST00000495122 DEFB116Q30KQ4 102 aa9.53□□□□□ -0.88
CBX4-204ENST00000495122 C20orf197Q8N268 126 aa9.53□□□□□ -0.88
CBX4-204ENST00000495122 KRTAP1-4P0C5Y4 121 aa9.51□□□□□ -0.89
CBX4-204ENST00000495122 HRCT1Q6UXD1 115 aa9.51□□□□□ -0.89
CBX4-204ENST00000495122 CASC2Q6XLA1 102 aa9.5□□□□□ -0.89
CBX4-204ENST00000495122 TMEM254Q8TBM7 123 aa9.49□□□□□ -0.89
CBX4-204ENST00000495122 KRTAP13-2Q52LG2 175 aa9.48□□□□□ -0.89
CBX4-204ENST00000495122 C5orf47Q569G3 176 aa9.48□□□□□ -0.89
CBX4-204ENST00000495122 A0A087X002 238 aa9.47□□□□□ -0.89
CBX4-204ENST00000495122 A0A1B0GVX0 72 aa9.47□□□□□ -0.89
CBX4-204ENST00000495122 LIMD2Q9BT23 127 aa9.47□□□□□ -0.89
CBX4-204ENST00000495122 MMP24-AS1A0A0U1RRL7 71 aa9.46□□□□□ -0.9
CBX4-204ENST00000495122 WFDC13Q8IUB5 93 aa9.45□□□□□ -0.9
CBX4-204ENST00000495122 A0A0U1RQV1 116 aa9.44□□□□□ -0.9
CBX4-204ENST00000495122 hDV103S1A0JD37 113 aa9.43□□□□□ -0.9
CBX4-204ENST00000495122 H3BPC8 53 aa9.43□□□□□ -0.9
CBX4-204ENST00000495122 C8orf17Q9NRJ1 99 aa9.43□□□□□ -0.9
CBX4-204ENST00000495122 RPS29P62273 56 aaKnown RBP9.42□□□□□ -0.9
CBX4-204ENST00000495122 C8orf87E5RJ46 101 aa9.41□□□□□ -0.9
CBX4-204ENST00000495122 ATP5EP56381 51 aaPredicted RBP9.41□□□□□ -0.9
CBX4-204ENST00000495122 CYSTM1Q9H1C7 97 aa9.41□□□□□ -0.9
CBX4-204ENST00000495122 TP53AIP1Q9HCN2 124 aa9.41□□□□□ -0.9
CBX4-204ENST00000495122 H7BZZ5 65 aa9.4□□□□□ -0.9
CBX4-204ENST00000495122 SPINK1P00995 79 aa9.4□□□□□ -0.9
CBX4-204ENST00000495122 TYMSOSQ8TAI1 123 aa9.4□□□□□ -0.9
CBX4-204ENST00000495122 MP68P56378 58 aa9.39□□□□□ -0.91
CBX4-204ENST00000495122 C4orf48Q5BLP8 95 aa9.39□□□□□ -0.91
CBX4-204ENST00000495122 SPAG11AQ6PDA7 123 aa9.39□□□□□ -0.91
CBX4-204ENST00000495122 SNURFQ9Y675 71 aa9.38□□□□□ -0.91
CBX4-204ENST00000495122 IGHV6-1A0A0B4J1U7 121 aa9.37□□□□□ -0.91
CBX4-204ENST00000495122 KRTAP10-8P60410 259 aa9.35□□□□□ -0.91
CBX4-204ENST00000495122 ZCCHC13Q8WW36 166 aaKnown RBP9.35□□□□□ -0.91
CBX4-204ENST00000495122 FAM236DA0A1B0GTK5 79 aa9.34□□□□□ -0.91
CBX4-204ENST00000495122 FAM236CP0DP71 79 aa9.34□□□□□ -0.91
CBX4-204ENST00000495122 RPS28P62857 69 aaKnown RBP9.34□□□□□ -0.91
CBX4-204ENST00000495122 MRPL34Q9BQ48 92 aaKnown RBP9.34□□□□□ -0.91
CBX4-204ENST00000495122 LRP2P98164 4655 aa9.34□□□□□ -0.91
CBX4-204ENST00000495122 C1orf195Q5TG92 126 aa9.32□□□□□ -0.92
CBX4-204ENST00000495122 LINC00304Q8N9R0 145 aa9.3□□□□□ -0.92
CBX4-204ENST00000495122 RNF213Q63HN8 5207 aa9.29□□□□□ -0.92
CBX4-204ENST00000495122 TRAV22A0A0B4J277 110 aa9.29□□□□□ -0.92
CBX4-204ENST00000495122 H0Y9P7 68 aa9.29□□□□□ -0.92
CBX4-204ENST00000495122 PRR26Q8N8Z3 221 aa9.26□□□□□ -0.93
CBX4-204ENST00000495122 LINC00313P59037 77 aa9.25□□□□□ -0.93
CBX4-204ENST00000495122 SERP1Q9Y6X1 66 aa9.23□□□□□ -0.93
CBX4-204ENST00000495122 LINC00208Q96KT6 92 aa9.22□□□□□ -0.93
CBX4-204ENST00000495122 NDUFS5O43920 106 aa9.2□□□□□ -0.94
CBX4-204ENST00000495122 NOTCH2NLQ7Z3S9 236 aa9.2□□□□□ -0.94
CBX4-204ENST00000495122 C1orf64Q8NEQ6 169 aa9.19□□□□□ -0.94
CBX4-204ENST00000495122 Q8N9P0 234 aaPredicted RBP9.18□□□□□ -0.94
CBX4-204ENST00000495122 SPANXA2-OT1Q8N9U9 137 aa9.18□□□□□ -0.94
CBX4-204ENST00000495122 LPAP08519 4548 aa9.15□□□□□ -0.94
CBX4-204ENST00000495122 CYP4F30PQ9H0H9 118 aa9.15□□□□□ -0.94
CBX4-204ENST00000495122 LOC101927531A0A1B0GV80 90 aa9.14□□□□□ -0.95
CBX4-204ENST00000495122 KRTAP16-1A8MUX0 517 aa9.12□□□□□ -0.95
CBX4-204ENST00000495122 KRTAP13-3Q3SY46 172 aa9.1□□□□□ -0.95
CBX4-204ENST00000495122 IGLV7-46A0A075B6I9 117 aa9.04□□□□□ -0.96
CBX4-204ENST00000495122 SMIM26A0A096LP01 95 aa9.02□□□□□ -0.97
CBX4-204ENST00000495122 Q5W150 140 aa9.02□□□□□ -0.97
CBX4-204ENST00000495122 FP248Q71RG6 208 aaPredicted RBP8.97□□□□□ -0.97
CBX4-204ENST00000495122 IGKV2-30P06310 120 aa8.96□□□□□ -0.98
CBX4-204ENST00000495122 PRR4Q16378 134 aa8.95□□□□□ -0.98
CBX4-204ENST00000495122 PCOTHQ58A44 107 aa8.94□□□□□ -0.98
CBX4-204ENST00000495122 C20orf166-AS1Q96NR2 134 aa8.94□□□□□ -0.98
CBX4-204ENST00000495122 A8MUU9 505 aa8.92□□□□□ -0.98
CBX4-204ENST00000495122 MUC2Q02817 5179 aa8.85□□□□□ -0.99
CBX4-204ENST00000495122 C7orf65Q6ZTY9 151 aa8.84□□□□□ -0.99
CBX4-204ENST00000495122 Q75L30 129 aa8.84□□□□□ -0.99
CBX4-204ENST00000495122 HRES1P13985 223 aa8.82□□□□□ -1
CBX4-204ENST00000495122 RETNLBQ9BQ08 111 aa8.82□□□□□ -1
CBX4-204ENST00000495122 V9GYY9 64 aa8.82□□□□□ -1
CBX4-204ENST00000495122 C9orf92A6NGG3 77 aa8.81□□□□□ -1
CBX4-204ENST00000495122 COA5Q86WW8 74 aa8.81□□□□□ -1
CBX4-204ENST00000495122 DMAC1Q96GE9 116 aa8.8□□□□□ -1
CBX4-204ENST00000495122 ACYP2P14621 99 aa8.79□□□□□ -1
CBX4-204ENST00000495122 Q1T7F1 81 aa8.79□□□□□ -1
CBX4-204ENST00000495122 IGKV2D-30A0A075B6S6 120 aa8.78□□□□□ -1
CBX4-204ENST00000495122 MUC17Q685J3 4493 aa8.76□□□□□ -1.01
CBX4-204ENST00000495122 A8MUN3 132 aa8.73□□□□□ -1.01
CBX4-204ENST00000495122 TPRXLQ17RH7 258 aa8.73□□□□□ -1.01
CBX4-204ENST00000495122 C4orf26Q17RF5 130 aa8.69□□□□□ -1.02
CBX4-204ENST00000495122 MPLKIPQ8TAP9 179 aa8.68□□□□□ -1.02
CBX4-204ENST00000495122 RPL37P61927 97 aaKnown RBP8.67□□□□□ -1.02
CBX4-204ENST00000495122 ATP11AUNQ6ZP68 121 aa8.66□□□□□ -1.02
CBX4-204ENST00000495122 KRTAP9-2Q9BYQ4 174 aa8.65□□□□□ -1.02
CBX4-204ENST00000495122 FAT4Q6V0I7 4981 aa8.64□□□□□ -1.03
CBX4-204ENST00000495122 CHKB-CPT1BH3BT56 60 aa8.63□□□□□ -1.03
CBX4-204ENST00000495122 XP32Q5T750 250 aa8.62□□□□□ -1.03
CBX4-204ENST00000495122 SPINK7P58062 85 aa8.61□□□□□ -1.03
CBX4-204ENST00000495122 LCE2AQ5TA79 106 aaPredicted RBP8.61□□□□□ -1.03
CBX4-204ENST00000495122 LINC01558Q9Y6Z2 57 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms