RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 FCGBPQ9Y6R7 5405 aaPredicted RBP11.45□□□□□ -0.58
COL27A1-208ENST00000494780 UBE2V1Q13404 147 aa11.44□□□□□ -0.58
COL27A1-208ENST00000494780 MTURNQ8N3F0 131 aa11.43□□□□□ -0.58
COL27A1-208ENST00000494780 A0A1B0GVX0 72 aa11.42□□□□□ -0.58
COL27A1-208ENST00000494780 K7ERJ3 54 aa11.41□□□□□ -0.58
COL27A1-208ENST00000494780 HSD52Q0P140 79 aa11.41□□□□□ -0.58
COL27A1-208ENST00000494780 ZCCHC13Q8WW36 166 aaKnown RBP11.37□□□□□ -0.59
COL27A1-208ENST00000494780 VPS25Q9BRG1 176 aa11.37□□□□□ -0.59
COL27A1-208ENST00000494780 RBM3P98179 157 aaKnown RBP11.35□□□□□ -0.59
COL27A1-208ENST00000494780 SPINK7P58062 85 aa11.33□□□□□ -0.6
COL27A1-208ENST00000494780 DSCR8Q96T75 97 aa11.33□□□□□ -0.6
COL27A1-208ENST00000494780 J3KT08 172 aa11.32□□□□□ -0.6
COL27A1-208ENST00000494780 C21orf62-AS1Q17RA5 79 aa11.31□□□□□ -0.6
COL27A1-208ENST00000494780 SCGB1C2P0DMR2 95 aa11.25□□□□□ -0.61
COL27A1-208ENST00000494780 Q8N9P0 234 aaPredicted RBP11.25□□□□□ -0.61
COL27A1-208ENST00000494780 C9JAW5 83 aa11.24□□□□□ -0.61
COL27A1-208ENST00000494780 PYY3Q5JQD4 70 aa11.24□□□□□ -0.61
COL27A1-208ENST00000494780 LINC00846Q9NV44 126 aa11.24□□□□□ -0.61
COL27A1-208ENST00000494780 NDUFB1O75438 58 aa11.23□□□□□ -0.61
COL27A1-208ENST00000494780 Q6ZQT0 140 aa11.23□□□□□ -0.61
COL27A1-208ENST00000494780 A8MWP4 228 aa11.21□□□□□ -0.61
COL27A1-208ENST00000494780 BAALC-AS2P0C853 105 aa11.2□□□□□ -0.62
COL27A1-208ENST00000494780 UQCR10Q9UDW1 63 aa11.19□□□□□ -0.62
COL27A1-208ENST00000494780 KRTAP19-6Q3LI70 58 aa11.18□□□□□ -0.62
COL27A1-208ENST00000494780 WFDC13Q8IUB5 93 aa11.18□□□□□ -0.62
COL27A1-208ENST00000494780 LYRM7Q5U5X0 104 aa11.16□□□□□ -0.62
COL27A1-208ENST00000494780 C8orf17Q9NRJ1 99 aa11.16□□□□□ -0.62
COL27A1-208ENST00000494780 SYNE2Q8WXH0 6885 aaKnown RBP11.16□□□□□ -0.62
COL27A1-208ENST00000494780 MACF1Q9UPN3 7388 aaKnown RBP11.16□□□□□ -0.62
COL27A1-208ENST00000494780 A0A1B0GW54 56 aa11.12□□□□□ -0.63
COL27A1-208ENST00000494780 IGKV3D-7A0A0C4DH55 119 aa11.09□□□□□ -0.63
COL27A1-208ENST00000494780 JMJD7-PLA2G4BH0Y9G9 81 aa11.09□□□□□ -0.63
COL27A1-208ENST00000494780 LOC110117498A0A087WWA1 95 aa11.07□□□□□ -0.64
COL27A1-208ENST00000494780 Q6ZVQ6 151 aa11.07□□□□□ -0.64
COL27A1-208ENST00000494780 PDE6GP18545 87 aa11.03□□□□□ -0.64
COL27A1-208ENST00000494780 ATXN8Q156A1 80 aa11.02□□□□□ -0.65
COL27A1-208ENST00000494780 PRR15Q8IV56 129 aa11.01□□□□□ -0.65
COL27A1-208ENST00000494780 H1FX-AS1Q4G0G2 97 aa10.98□□□□□ -0.65
COL27A1-208ENST00000494780 TMEM254Q8TBM7 123 aa10.97□□□□□ -0.65
COL27A1-208ENST00000494780 MRPL34Q9BQ48 92 aaKnown RBP10.97□□□□□ -0.65
COL27A1-208ENST00000494780 C14orf132Q9NPU4 83 aa10.96□□□□□ -0.65
COL27A1-208ENST00000494780 NREPQ16612 68 aa10.95□□□□□ -0.66
COL27A1-208ENST00000494780 MMP24-AS1A0A0U1RRL7 71 aa10.94□□□□□ -0.66
COL27A1-208ENST00000494780 NAA38Q9BRA0 125 aaKnown RBP10.92□□□□□ -0.66
COL27A1-208ENST00000494780 M0R143 59 aa10.89□□□□□ -0.67
COL27A1-208ENST00000494780 hDV103S1A0JD37 113 aa10.87□□□□□ -0.67
COL27A1-208ENST00000494780 NDUFS5O43920 106 aa10.86□□□□□ -0.67
COL27A1-208ENST00000494780 KRTAP6-3Q3LI67 103 aa10.86□□□□□ -0.67
COL27A1-208ENST00000494780 K7EQZ3 153 aa10.83□□□□□ -0.68
COL27A1-208ENST00000494780 TMA7Q9Y2S6 64 aaKnown RBP10.83□□□□□ -0.68
COL27A1-208ENST00000494780 IGKV2D-30A0A075B6S6 120 aa10.81□□□□□ -0.68
COL27A1-208ENST00000494780 IGKV2-30P06310 120 aa10.81□□□□□ -0.68
COL27A1-208ENST00000494780 C7orf65Q6ZTY9 151 aa10.79□□□□□ -0.68
COL27A1-208ENST00000494780 Q5W150 140 aa10.75□□□□□ -0.69
COL27A1-208ENST00000494780 BPY2O14599 106 aa10.71□□□□□ -0.69
COL27A1-208ENST00000494780 H3BT86 120 aa10.66□□□□□ -0.7
COL27A1-208ENST00000494780 C4orf26Q17RF5 130 aa10.65□□□□□ -0.7
COL27A1-208ENST00000494780 CASC2Q6XLA1 102 aa10.64□□□□□ -0.71
COL27A1-208ENST00000494780 HCG22E2RYF7 251 aa10.62□□□□□ -0.71
COL27A1-208ENST00000494780 Q8N9L7 120 aa10.59□□□□□ -0.71
COL27A1-208ENST00000494780 CXCL6P80162 114 aa10.58□□□□□ -0.72
COL27A1-208ENST00000494780 BATFQ16520 125 aa10.57□□□□□ -0.72
COL27A1-208ENST00000494780 C5orf47Q569G3 176 aa10.57□□□□□ -0.72
COL27A1-208ENST00000494780 FAM236AA0A1B0GUQ0 79 aa10.56□□□□□ -0.72
COL27A1-208ENST00000494780 FAM236BA0A1B0GV22 79 aa10.56□□□□□ -0.72
COL27A1-208ENST00000494780 A6NN06 94 aa10.54□□□□□ -0.72
COL27A1-208ENST00000494780 TSTD3H0UI37 97 aa10.54□□□□□ -0.72
COL27A1-208ENST00000494780 C9orf118A6NHY6 69 aa10.53□□□□□ -0.72
COL27A1-208ENST00000494780 SMIM6P0DI80 62 aa10.53□□□□□ -0.72
COL27A1-208ENST00000494780 NEBP20929 6669 aa10.53□□□□□ -0.72
COL27A1-208ENST00000494780 MT1BP07438 61 aa10.51□□□□□ -0.73
COL27A1-208ENST00000494780 A0A1W2PPM0 123 aa10.5□□□□□ -0.73
COL27A1-208ENST00000494780 Q5VV11 94 aa10.49□□□□□ -0.73
COL27A1-208ENST00000494780 KRTAP3-1Q9BYR8 98 aa10.49□□□□□ -0.73
COL27A1-208ENST00000494780 S4R3F8 94 aa10.49□□□□□ -0.73
COL27A1-208ENST00000494780 CSAG1Q6PB30 78 aa10.47□□□□□ -0.73
COL27A1-208ENST00000494780 KRTAP19-8Q3LI54 63 aa10.46□□□□□ -0.73
COL27A1-208ENST00000494780 SPRR2GQ9BYE4 73 aa10.46□□□□□ -0.73
COL27A1-208ENST00000494780 TAX1BP3O14907 124 aa10.45□□□□□ -0.74
COL27A1-208ENST00000494780 C1orf64Q8NEQ6 169 aa10.42□□□□□ -0.74
COL27A1-208ENST00000494780 LCA10Q71F78 164 aa10.4□□□□□ -0.74
COL27A1-208ENST00000494780 UBL5Q9BZL1 73 aa10.37□□□□□ -0.75
COL27A1-208ENST00000494780 KRTAP10-5P60370 271 aa10.35□□□□□ -0.75
COL27A1-208ENST00000494780 SMCPP49901 116 aaPredicted RBP10.33□□□□□ -0.76
COL27A1-208ENST00000494780 KLKP1Q107X0 134 aa10.32□□□□□ -0.76
COL27A1-208ENST00000494780 SPCS1Q9Y6A9 102 aa10.32□□□□□ -0.76
COL27A1-208ENST00000494780 MUC12Q9UKN1 5478 aa10.3□□□□□ -0.76
COL27A1-208ENST00000494780 TP53AIP1Q9HCN2 124 aa10.28□□□□□ -0.76
COL27A1-208ENST00000494780 KRTAP3-3Q9BYR6 98 aa10.23□□□□□ -0.77
COL27A1-208ENST00000494780 KRTAP5-9P26371 169 aa10.22□□□□□ -0.77
COL27A1-208ENST00000494780 KRTAP20-1Q3LI63 56 aa10.21□□□□□ -0.77
COL27A1-208ENST00000494780 PRO0461Q9UI25 63 aa10.19□□□□□ -0.78
COL27A1-208ENST00000494780 CRIPTQ9P021 101 aa10.18□□□□□ -0.78
COL27A1-208ENST00000494780 IMUPQ9GZP8 106 aa10.12□□□□□ -0.79
COL27A1-208ENST00000494780 CYP4F30PQ9H0H9 118 aa10.12□□□□□ -0.79
COL27A1-208ENST00000494780 A0A087WVE0 104 aa10.07□□□□□ -0.8
COL27A1-208ENST00000494780 K7EP34 96 aa10.07□□□□□ -0.8
COL27A1-208ENST00000494780 KMT2DO14686 5537 aa10.05□□□□□ -0.8
COL27A1-208ENST00000494780 COL5A1-AS1Q5SY13 56 aa10.04□□□□□ -0.8
COL27A1-208ENST00000494780 LOC105371267A0A1B0GV96 52 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms