RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 MUC2Q02817 5179 aa9.68□□□□□ -0.86
PDLIM7-208ENST00000493815 MUC17Q685J3 4493 aa9.66□□□□□ -0.86
PDLIM7-208ENST00000493815 IGHV6-1A0A0B4J1U7 121 aa9.66□□□□□ -0.86
PDLIM7-208ENST00000493815 NOTCH2NLQ7Z3S9 236 aa9.66□□□□□ -0.86
PDLIM7-208ENST00000493815 J3KT08 172 aa9.64□□□□□ -0.87
PDLIM7-208ENST00000493815 A0A1B0GVX0 72 aa9.62□□□□□ -0.87
PDLIM7-208ENST00000493815 LINC00313P59037 77 aa9.62□□□□□ -0.87
PDLIM7-208ENST00000493815 SEC61BP60468 96 aaKnown RBP9.62□□□□□ -0.87
PDLIM7-208ENST00000493815 LINC00846Q9NV44 126 aa9.62□□□□□ -0.87
PDLIM7-208ENST00000493815 Q6ZVQ6 151 aa9.61□□□□□ -0.87
PDLIM7-208ENST00000493815 RPL37P61927 97 aaKnown RBP9.61□□□□□ -0.87
PDLIM7-208ENST00000493815 PCOTHQ58A44 107 aa9.6□□□□□ -0.87
PDLIM7-208ENST00000493815 A8MWP4 228 aa9.59□□□□□ -0.87
PDLIM7-208ENST00000493815 IGKV3D-7A0A0C4DH55 119 aa9.58□□□□□ -0.88
PDLIM7-208ENST00000493815 NDUFB1O75438 58 aa9.58□□□□□ -0.88
PDLIM7-208ENST00000493815 KRTAP16-1A8MUX0 517 aa9.56□□□□□ -0.88
PDLIM7-208ENST00000493815 BPY2O14599 106 aa9.56□□□□□ -0.88
PDLIM7-208ENST00000493815 KRTAP4-1Q9BYQ7 146 aa9.55□□□□□ -0.88
PDLIM7-208ENST00000493815 Q75L30 129 aa9.55□□□□□ -0.88
PDLIM7-208ENST00000493815 UBL5Q9BZL1 73 aa9.55□□□□□ -0.88
PDLIM7-208ENST00000493815 C8orf87E5RJ46 101 aa9.53□□□□□ -0.88
PDLIM7-208ENST00000493815 PRR15Q8IV56 129 aa9.53□□□□□ -0.88
PDLIM7-208ENST00000493815 C20orf166-AS1Q96NR2 134 aa9.53□□□□□ -0.88
PDLIM7-208ENST00000493815 K7EQZ3 153 aa9.52□□□□□ -0.89
PDLIM7-208ENST00000493815 A8MUU9 505 aa9.51□□□□□ -0.89
PDLIM7-208ENST00000493815 Q8N9L7 120 aa9.51□□□□□ -0.89
PDLIM7-208ENST00000493815 C8orf17Q9NRJ1 99 aa9.51□□□□□ -0.89
PDLIM7-208ENST00000493815 ATP11AUNQ6ZP68 121 aa9.48□□□□□ -0.89
PDLIM7-208ENST00000493815 MMP24-AS1A0A0U1RRL7 71 aa9.45□□□□□ -0.9
PDLIM7-208ENST00000493815 ACYP1P07311 99 aa9.43□□□□□ -0.9
PDLIM7-208ENST00000493815 FAM240AA0A1B0GVK7 77 aa9.42□□□□□ -0.9
PDLIM7-208ENST00000493815 J3QR89 54 aa9.42□□□□□ -0.9
PDLIM7-208ENST00000493815 hDV103S1A0JD37 113 aa9.39□□□□□ -0.91
PDLIM7-208ENST00000493815 Q8N9P0 234 aaPredicted RBP9.38□□□□□ -0.91
PDLIM7-208ENST00000493815 WFDC13Q8IUB5 93 aa9.37□□□□□ -0.91
PDLIM7-208ENST00000493815 CXCL6P80162 114 aa9.36□□□□□ -0.91
PDLIM7-208ENST00000493815 TMEM254Q8TBM7 123 aa9.36□□□□□ -0.91
PDLIM7-208ENST00000493815 MRPL34Q9BQ48 92 aaKnown RBP9.36□□□□□ -0.91
PDLIM7-208ENST00000493815 CASC2Q6XLA1 102 aa9.33□□□□□ -0.92
PDLIM7-208ENST00000493815 FAT4Q6V0I7 4981 aa9.32□□□□□ -0.92
PDLIM7-208ENST00000493815 NDUFS5O43920 106 aa9.31□□□□□ -0.92
PDLIM7-208ENST00000493815 ZCCHC13Q8WW36 166 aaKnown RBP9.3□□□□□ -0.92
PDLIM7-208ENST00000493815 HCG22E2RYF7 251 aa9.29□□□□□ -0.92
PDLIM7-208ENST00000493815 A0A0U1RQV1 116 aa9.29□□□□□ -0.92
PDLIM7-208ENST00000493815 LINC00643Q86TS7 51 aa9.26□□□□□ -0.93
PDLIM7-208ENST00000493815 ATP5EP2Q5VTU8 51 aa9.25□□□□□ -0.93
PDLIM7-208ENST00000493815 KRTAP19-2Q3LHN2 52 aa9.23□□□□□ -0.93
PDLIM7-208ENST00000493815 HIST1H4AP62805 103 aaKnown RBP9.23□□□□□ -0.93
PDLIM7-208ENST00000493815 C5orf47Q569G3 176 aa9.21□□□□□ -0.93
PDLIM7-208ENST00000493815 LCE2CQ5TA81 110 aa9.19□□□□□ -0.94
PDLIM7-208ENST00000493815 Q5W150 140 aa9.19□□□□□ -0.94
PDLIM7-208ENST00000493815 A0A087WVE0 104 aa9.16□□□□□ -0.94
PDLIM7-208ENST00000493815 SPINK7P58062 85 aa9.16□□□□□ -0.94
PDLIM7-208ENST00000493815 COX6B2Q6YFQ2 88 aa9.13□□□□□ -0.95
PDLIM7-208ENST00000493815 HRES1P13985 223 aa9.12□□□□□ -0.95
PDLIM7-208ENST00000493815 LCE2AQ5TA79 106 aaPredicted RBP9.1□□□□□ -0.95
PDLIM7-208ENST00000493815 SMIM20Q8N5G0 67 aa9.1□□□□□ -0.95
PDLIM7-208ENST00000493815 ANAPC13Q9BS18 74 aa9.1□□□□□ -0.95
PDLIM7-208ENST00000493815 IGKV2D-30A0A075B6S6 120 aa9.07□□□□□ -0.96
PDLIM7-208ENST00000493815 IGKV2-30P06310 120 aa9.07□□□□□ -0.96
PDLIM7-208ENST00000493815 TP53AIP1Q9HCN2 124 aa9.06□□□□□ -0.96
PDLIM7-208ENST00000493815 MT1HP80294 61 aa9.05□□□□□ -0.96
PDLIM7-208ENST00000493815 MPLKIPQ8TAP9 179 aa9.05□□□□□ -0.96
PDLIM7-208ENST00000493815 MT-ATP8P03928 68 aa9.02□□□□□ -0.97
PDLIM7-208ENST00000493815 RBM12B-AS1Q9P1G2 102 aa9.02□□□□□ -0.97
PDLIM7-208ENST00000493815 FAM236DA0A1B0GTK5 79 aa9.01□□□□□ -0.97
PDLIM7-208ENST00000493815 FAM236CP0DP71 79 aa9.01□□□□□ -0.97
PDLIM7-208ENST00000493815 C7orf65Q6ZTY9 151 aa9□□□□□ -0.97
PDLIM7-208ENST00000493815 FLGP20930 4061 aaPredicted RBP8.99□□□□□ -0.97
PDLIM7-208ENST00000493815 TRAV22A0A0B4J277 110 aa8.94□□□□□ -0.98
PDLIM7-208ENST00000493815 RPS28P62857 69 aaKnown RBP8.94□□□□□ -0.98
PDLIM7-208ENST00000493815 UQCRQO14949 82 aa8.93□□□□□ -0.98
PDLIM7-208ENST00000493815 M0R2T5 61 aa8.92□□□□□ -0.98
PDLIM7-208ENST00000493815 IMUPQ9GZP8 106 aa8.91□□□□□ -0.98
PDLIM7-208ENST00000493815 OCR1Q9BZK8 76 aa8.9□□□□□ -0.98
PDLIM7-208ENST00000493815 H0Y9P7 68 aa8.88□□□□□ -0.99
PDLIM7-208ENST00000493815 C4orf26Q17RF5 130 aa8.88□□□□□ -0.99
PDLIM7-208ENST00000493815 CCDC179H3BU77 68 aa8.87□□□□□ -0.99
PDLIM7-208ENST00000493815 CYP4F30PQ9H0H9 118 aa8.85□□□□□ -0.99
PDLIM7-208ENST00000493815 FAM236AA0A1B0GUQ0 79 aa8.82□□□□□ -1
PDLIM7-208ENST00000493815 FAM236BA0A1B0GV22 79 aa8.82□□□□□ -1
PDLIM7-208ENST00000493815 LOC101927531A0A1B0GV80 90 aa8.82□□□□□ -1
PDLIM7-208ENST00000493815 ATOX1O00244 68 aa8.81□□□□□ -1
PDLIM7-208ENST00000493815 KRTAP10-6P60371 365 aaPredicted RBP8.8□□□□□ -1
PDLIM7-208ENST00000493815 C1orf64Q8NEQ6 169 aa8.79□□□□□ -1
PDLIM7-208ENST00000493815 LINC00208Q96KT6 92 aa8.79□□□□□ -1
PDLIM7-208ENST00000493815 LORP23490 312 aaPredicted RBP8.77□□□□□ -1.01
PDLIM7-208ENST00000493815 H1FX-AS1Q4G0G2 97 aa8.77□□□□□ -1.01
PDLIM7-208ENST00000493815 MP68P56378 58 aa8.76□□□□□ -1.01
PDLIM7-208ENST00000493815 KRTAP3-1Q9BYR8 98 aa8.75□□□□□ -1.01
PDLIM7-208ENST00000493815 KLKP1Q107X0 134 aa8.7□□□□□ -1.02
PDLIM7-208ENST00000493815 TRAV7A0A075B6U4 112 aa8.67□□□□□ -1.02
PDLIM7-208ENST00000493815 PRO0628Q9UI54 55 aa8.65□□□□□ -1.02
PDLIM7-208ENST00000493815 H3BPC8 53 aa8.65□□□□□ -1.03
PDLIM7-208ENST00000493815 TMEM258P61165 79 aa8.63□□□□□ -1.03
PDLIM7-208ENST00000493815 KRTAP9-8Q9BYQ0 159 aa8.62□□□□□ -1.03
PDLIM7-208ENST00000493815 SEC61GP60059 68 aa8.6□□□□□ -1.03
PDLIM7-208ENST00000493815 COX7CP15954 63 aa8.58□□□□□ -1.04
PDLIM7-208ENST00000493815 S4R3F8 94 aa8.58□□□□□ -1.04
PDLIM7-208ENST00000493815 LCA10Q71F78 164 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms