RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 TRBV20-1A0A075B6N2 111 aa9.28□□□□□ -0.92
CHD1L-209ENST00000492728 PSMB2P49721 201 aa9.28□□□□□ -0.92
CHD1L-209ENST00000492728 A0A1B0GV90 55 aa9.26□□□□□ -0.93
CHD1L-209ENST00000492728 CCKP06307 115 aa9.26□□□□□ -0.93
CHD1L-209ENST00000492728 HRES1P13985 223 aa9.26□□□□□ -0.93
CHD1L-209ENST00000492728 C9orf118A6NHY6 69 aa9.25□□□□□ -0.93
CHD1L-209ENST00000492728 TMEM256-PLSCR3K7ERE1 68 aa9.25□□□□□ -0.93
CHD1L-209ENST00000492728 MPLKIPQ8TAP9 179 aa9.25□□□□□ -0.93
CHD1L-209ENST00000492728 KRTAP4-12Q9BQ66 201 aa9.25□□□□□ -0.93
CHD1L-209ENST00000492728 H3BQ85 93 aa9.23□□□□□ -0.93
CHD1L-209ENST00000492728 TRACP01848 142 aa9.23□□□□□ -0.93
CHD1L-209ENST00000492728 MT2AP02795 61 aa9.23□□□□□ -0.93
CHD1L-209ENST00000492728 IGHV6-1A0A0B4J1U7 121 aa9.22□□□□□ -0.93
CHD1L-209ENST00000492728 UBE2V1Q13404 147 aa9.22□□□□□ -0.93
CHD1L-209ENST00000492728 COX6CP09669 75 aa9.21□□□□□ -0.94
CHD1L-209ENST00000492728 FAM236DA0A1B0GTK5 79 aa9.18□□□□□ -0.94
CHD1L-209ENST00000492728 FAM236CP0DP71 79 aa9.18□□□□□ -0.94
CHD1L-209ENST00000492728 A0A1W2PPM0 123 aa9.17□□□□□ -0.94
CHD1L-209ENST00000492728 MT1FP04733 61 aa9.17□□□□□ -0.94
CHD1L-209ENST00000492728 VPS25Q9BRG1 176 aa9.17□□□□□ -0.94
CHD1L-209ENST00000492728 A0A1B0GVX0 72 aa9.15□□□□□ -0.94
CHD1L-209ENST00000492728 KRTAP9-9Q9BYP9 154 aa9.13□□□□□ -0.95
CHD1L-209ENST00000492728 KRTAP9-4Q9BYQ2 154 aa9.13□□□□□ -0.95
CHD1L-209ENST00000492728 RBM3P98179 157 aaKnown RBP9.12□□□□□ -0.95
CHD1L-209ENST00000492728 LYRM7Q5U5X0 104 aa9.12□□□□□ -0.95
CHD1L-209ENST00000492728 NAA38Q9BRA0 125 aaKnown RBP9.12□□□□□ -0.95
CHD1L-209ENST00000492728 RBM12B-AS1Q9P1G2 102 aa9.12□□□□□ -0.95
CHD1L-209ENST00000492728 C8orf87E5RJ46 101 aa9.11□□□□□ -0.95
CHD1L-209ENST00000492728 K7EP34 96 aa9.11□□□□□ -0.95
CHD1L-209ENST00000492728 SCGB1C2P0DMR2 95 aa9.1□□□□□ -0.95
CHD1L-209ENST00000492728 GTF2H5Q6ZYL4 71 aa9.1□□□□□ -0.95
CHD1L-209ENST00000492728 DSCR8Q96T75 97 aa9.09□□□□□ -0.95
CHD1L-209ENST00000492728 SPCS1Q9Y6A9 102 aa9.09□□□□□ -0.95
CHD1L-209ENST00000492728 BAALC-AS2P0C853 105 aa9.07□□□□□ -0.96
CHD1L-209ENST00000492728 ZCCHC13Q8WW36 166 aaKnown RBP9.07□□□□□ -0.96
CHD1L-209ENST00000492728 KRTAP9-3Q9BYQ3 159 aa9.07□□□□□ -0.96
CHD1L-209ENST00000492728 FCGBPQ9Y6R7 5405 aaPredicted RBP9.06□□□□□ -0.96
CHD1L-209ENST00000492728 Q6ZQT0 140 aa9.06□□□□□ -0.96
CHD1L-209ENST00000492728 KRTAP4-8A0A0G2JLE6 195 aa9.04□□□□□ -0.96
CHD1L-209ENST00000492728 C9JAW5 83 aa9.04□□□□□ -0.96
CHD1L-209ENST00000492728 J3KT08 172 aa9.02□□□□□ -0.97
CHD1L-209ENST00000492728 SPINK7P58062 85 aa9.02□□□□□ -0.97
CHD1L-209ENST00000492728 KRTAP10-10P60014 251 aa9.02□□□□□ -0.97
CHD1L-209ENST00000492728 KRTAP9-7A8MTY7 169 aa9.01□□□□□ -0.97
CHD1L-209ENST00000492728 KRTAP19-1Q8IUB9 90 aa9.01□□□□□ -0.97
CHD1L-209ENST00000492728 Q8N9P0 234 aaPredicted RBP9.01□□□□□ -0.97
CHD1L-209ENST00000492728 ATXN8Q156A1 80 aa8.98□□□□□ -0.97
CHD1L-209ENST00000492728 IGKV3D-7A0A0C4DH55 119 aa8.97□□□□□ -0.97
CHD1L-209ENST00000492728 C8orf17Q9NRJ1 99 aa8.97□□□□□ -0.97
CHD1L-209ENST00000492728 C21orf62-AS1Q17RA5 79 aa8.96□□□□□ -0.98
CHD1L-209ENST00000492728 LOC110117498A0A087WWA1 95 aa8.95□□□□□ -0.98
CHD1L-209ENST00000492728 A8MWP4 228 aa8.95□□□□□ -0.98
CHD1L-209ENST00000492728 F8W1H4 67 aa8.95□□□□□ -0.98
CHD1L-209ENST00000492728 PRO0461Q9UI25 63 aa8.95□□□□□ -0.98
CHD1L-209ENST00000492728 NDUFB1O75438 58 aa8.93□□□□□ -0.98
CHD1L-209ENST00000492728 JMJD7-PLA2G4BH0Y9G9 81 aa8.92□□□□□ -0.98
CHD1L-209ENST00000492728 WFDC13Q8IUB5 93 aa8.92□□□□□ -0.98
CHD1L-209ENST00000492728 MTURNQ8N3F0 131 aa8.92□□□□□ -0.98
CHD1L-209ENST00000492728 C14orf132Q9NPU4 83 aa8.92□□□□□ -0.98
CHD1L-209ENST00000492728 Q6ZVQ6 151 aa8.88□□□□□ -0.99
CHD1L-209ENST00000492728 A0A1B0GW54 56 aa8.87□□□□□ -0.99
CHD1L-209ENST00000492728 H3BT86 120 aa8.87□□□□□ -0.99
CHD1L-209ENST00000492728 PRR15Q8IV56 129 aa8.86□□□□□ -0.99
CHD1L-209ENST00000492728 MMP24-AS1A0A0U1RRL7 71 aa8.85□□□□□ -0.99
CHD1L-209ENST00000492728 PDE6GP18545 87 aa8.84□□□□□ -0.99
CHD1L-209ENST00000492728 MACF1Q9UPN3 7388 aaKnown RBP8.8□□□□□ -1
CHD1L-209ENST00000492728 ETDBQ3ZM63 59 aa8.8□□□□□ -1
CHD1L-209ENST00000492728 NREPQ16612 68 aa8.79□□□□□ -1
CHD1L-209ENST00000492728 TMEM254Q8TBM7 123 aa8.79□□□□□ -1
CHD1L-209ENST00000492728 MRPL34Q9BQ48 92 aaKnown RBP8.79□□□□□ -1
CHD1L-209ENST00000492728 K7EQZ3 153 aa8.78□□□□□ -1
CHD1L-209ENST00000492728 SYNE2Q8WXH0 6885 aaKnown RBP8.77□□□□□ -1.01
CHD1L-209ENST00000492728 KRTAP19-6Q3LI70 58 aa8.76□□□□□ -1.01
CHD1L-209ENST00000492728 KRTAP4-7Q9BYR0 210 aa8.74□□□□□ -1.01
CHD1L-209ENST00000492728 hDV103S1A0JD37 113 aa8.73□□□□□ -1.01
CHD1L-209ENST00000492728 K7ERU9 68 aa8.73□□□□□ -1.01
CHD1L-209ENST00000492728 J3QR89 54 aa8.7□□□□□ -1.02
CHD1L-209ENST00000492728 H1FX-AS1Q4G0G2 97 aa8.7□□□□□ -1.02
CHD1L-209ENST00000492728 Q5W150 140 aa8.7□□□□□ -1.02
CHD1L-209ENST00000492728 LCE1DQ5T752 114 aa8.69□□□□□ -1.02
CHD1L-209ENST00000492728 NDUFS5O43920 106 aa8.68□□□□□ -1.02
CHD1L-209ENST00000492728 IGKV2D-30A0A075B6S6 120 aa8.65□□□□□ -1.02
CHD1L-209ENST00000492728 IGKV2-30P06310 120 aa8.65□□□□□ -1.02
CHD1L-209ENST00000492728 Q8N9L7 120 aa8.65□□□□□ -1.02
CHD1L-209ENST00000492728 BPY2O14599 106 aa8.63□□□□□ -1.03
CHD1L-209ENST00000492728 C7orf65Q6ZTY9 151 aa8.61□□□□□ -1.03
CHD1L-209ENST00000492728 FAM240AA0A1B0GVK7 77 aa8.6□□□□□ -1.03
CHD1L-209ENST00000492728 LINC00846Q9NV44 126 aa8.58□□□□□ -1.04
CHD1L-209ENST00000492728 HCG22E2RYF7 251 aa8.56□□□□□ -1.04
CHD1L-209ENST00000492728 ACYP1P07311 99 aa8.56□□□□□ -1.04
CHD1L-209ENST00000492728 CASC2Q6XLA1 102 aa8.56□□□□□ -1.04
CHD1L-209ENST00000492728 C4orf26Q17RF5 130 aa8.54□□□□□ -1.04
CHD1L-209ENST00000492728 KRTAP4-9Q9BYQ8 210 aa8.48□□□□□ -1.05
CHD1L-209ENST00000492728 KRTAP3-1Q9BYR8 98 aa8.48□□□□□ -1.05
CHD1L-209ENST00000492728 CXCL6P80162 114 aa8.46□□□□□ -1.06
CHD1L-209ENST00000492728 C5orf47Q569G3 176 aa8.44□□□□□ -1.06
CHD1L-209ENST00000492728 KRTAP6-3Q3LI67 103 aa8.41□□□□□ -1.06
CHD1L-209ENST00000492728 LINC00643Q86TS7 51 aa8.39□□□□□ -1.07
CHD1L-209ENST00000492728 KRTAP4-2Q9BYR5 136 aa8.38□□□□□ -1.07
CHD1L-209ENST00000492728 MT1BP07438 61 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms