RNA–Protein interactions for RNA: ENST00000492259.6

RTEL1-TNFRSF6B-203, Transcript of RTEL1-TNFRSF6B readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 5

Gene RTEL1-TNFRSF6B, Length 4,824 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTEL1-TNFRSF6B-203ENST00000492259 MUC3AQ02505 3323 aa9.15□□□□□ -0.95
RTEL1-TNFRSF6B-203ENST00000492259 LCE6AA0A183 80 aa9.14□□□□□ -0.95
RTEL1-TNFRSF6B-203ENST00000492259 ZANQ9Y493 2812 aa9.13□□□□□ -0.95
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP1-5Q9BYS1 174 aa9.13□□□□□ -0.95
RTEL1-TNFRSF6B-203ENST00000492259 CELSR2Q9HCU4 2923 aa9.13□□□□□ -0.95
RTEL1-TNFRSF6B-203ENST00000492259 DMXL1Q9Y485 3027 aa9.12□□□□□ -0.95
RTEL1-TNFRSF6B-203ENST00000492259 DCHS1Q96JQ0 3298 aa9.1□□□□□ -0.95
RTEL1-TNFRSF6B-203ENST00000492259 ITPR2Q14571 2701 aa9.04□□□□□ -0.96
RTEL1-TNFRSF6B-203ENST00000492259 HIVEP1P15822 2718 aa9.02□□□□□ -0.96
RTEL1-TNFRSF6B-203ENST00000492259 M0QZ58 72 aa9.02□□□□□ -0.97
RTEL1-TNFRSF6B-203ENST00000492259 A0A087X002 238 aa9.02□□□□□ -0.97
RTEL1-TNFRSF6B-203ENST00000492259 PANO1I0J062 215 aa9.01□□□□□ -0.97
RTEL1-TNFRSF6B-203ENST00000492259 DMDP11532 3685 aa9□□□□□ -0.97
RTEL1-TNFRSF6B-203ENST00000492259 NF1P21359 2839 aa8.98□□□□□ -0.97
RTEL1-TNFRSF6B-203ENST00000492259 NOTCH2NLQ7Z3S9 236 aa8.95□□□□□ -0.98
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP7-1Q8IUC3 87 aa8.94□□□□□ -0.98
RTEL1-TNFRSF6B-203ENST00000492259 FBN2P35556 2912 aa8.93□□□□□ -0.98
RTEL1-TNFRSF6B-203ENST00000492259 PLAC4Q8WY50 150 aa8.93□□□□□ -0.98
RTEL1-TNFRSF6B-203ENST00000492259 DCHS2Q6V1P9 2916 aa8.92□□□□□ -0.98
RTEL1-TNFRSF6B-203ENST00000492259 TNRC18O15417 2968 aaPredicted RBP8.91□□□□□ -0.98
RTEL1-TNFRSF6B-203ENST00000492259 ZFHX4Q86UP3 3567 aa8.9□□□□□ -0.99
RTEL1-TNFRSF6B-203ENST00000492259 CRYBG3Q68DQ2 2970 aa8.89□□□□□ -0.99
RTEL1-TNFRSF6B-203ENST00000492259 A8MUU9 505 aa8.88□□□□□ -0.99
RTEL1-TNFRSF6B-203ENST00000492259 APCP25054 2843 aa8.88□□□□□ -0.99
RTEL1-TNFRSF6B-203ENST00000492259 M0R2T5 61 aa8.86□□□□□ -0.99
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP11-1Q8IUC1 163 aa8.86□□□□□ -0.99
RTEL1-TNFRSF6B-203ENST00000492259 NIPBLQ6KC79 2804 aaeCLIP8.84□□□□□ -0.99
RTEL1-TNFRSF6B-203ENST00000492259 RELNP78509 3460 aa8.81□□□□□ -1
RTEL1-TNFRSF6B-203ENST00000492259 C20orf166-AS1Q96NR2 134 aa8.8□□□□□ -1
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP10-1P60331 282 aa8.8□□□□□ -1
RTEL1-TNFRSF6B-203ENST00000492259 KMT2BQ9UMN6 2715 aaPredicted RBP8.79□□□□□ -1
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP10-2P60368 255 aa8.78□□□□□ -1
RTEL1-TNFRSF6B-203ENST00000492259 HRNRQ86YZ3 2850 aaPredicted RBP8.78□□□□□ -1
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP13-1Q8IUC0 172 aa8.75□□□□□ -1.01
RTEL1-TNFRSF6B-203ENST00000492259 LAMA5O15230 3695 aa8.75□□□□□ -1.01
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP21-3Q3LHN1 58 aa8.74□□□□□ -1.01
RTEL1-TNFRSF6B-203ENST00000492259 SEC61BP60468 96 aaKnown RBP8.73□□□□□ -1.01
RTEL1-TNFRSF6B-203ENST00000492259 Q5VSD8 79 aa8.71□□□□□ -1.02
RTEL1-TNFRSF6B-203ENST00000492259 Q6ZRN7 208 aaPredicted RBP8.7□□□□□ -1.02
RTEL1-TNFRSF6B-203ENST00000492259 CELSR1Q9NYQ6 3014 aa8.63□□□□□ -1.03
RTEL1-TNFRSF6B-203ENST00000492259 SMG1Q96Q15 3661 aaKnown RBP8.61□□□□□ -1.03
RTEL1-TNFRSF6B-203ENST00000492259 TENM4Q6N022 2769 aa8.59□□□□□ -1.03
RTEL1-TNFRSF6B-203ENST00000492259 SPENQ96T58 3664 aaKnown RBP8.59□□□□□ -1.04
RTEL1-TNFRSF6B-203ENST00000492259 MXRA5Q9NR99 2828 aa8.58□□□□□ -1.04
RTEL1-TNFRSF6B-203ENST00000492259 CUBNO60494 3623 aa8.57□□□□□ -1.04
RTEL1-TNFRSF6B-203ENST00000492259 C10orf95Q9H7T3 257 aa8.57□□□□□ -1.04
RTEL1-TNFRSF6B-203ENST00000492259 RPS29P62273 56 aaKnown RBP8.53□□□□□ -1.04
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP13-2Q52LG2 175 aa8.52□□□□□ -1.04
RTEL1-TNFRSF6B-203ENST00000492259 CSMD1Q96PZ7 3565 aa8.52□□□□□ -1.04
RTEL1-TNFRSF6B-203ENST00000492259 SVEP1Q4LDE5 3571 aa8.5□□□□□ -1.05
RTEL1-TNFRSF6B-203ENST00000492259 TNP1P09430 55 aa8.47□□□□□ -1.05
RTEL1-TNFRSF6B-203ENST00000492259 P0C880 135 aa8.47□□□□□ -1.05
RTEL1-TNFRSF6B-203ENST00000492259 PP632Q6XCG6 107 aa8.44□□□□□ -1.06
RTEL1-TNFRSF6B-203ENST00000492259 H0YAA0 97 aa8.42□□□□□ -1.06
RTEL1-TNFRSF6B-203ENST00000492259 TENM3Q9P273 2699 aa8.41□□□□□ -1.06
RTEL1-TNFRSF6B-203ENST00000492259 PKD1L1Q8TDX9 2849 aa8.34□□□□□ -1.07
RTEL1-TNFRSF6B-203ENST00000492259 FBN1P35555 2871 aaKnown RBP8.29□□□□□ -1.08
RTEL1-TNFRSF6B-203ENST00000492259 PDZD2O15018 2839 aa8.25□□□□□ -1.09
RTEL1-TNFRSF6B-203ENST00000492259 TENM1Q9UKZ4 2725 aa8.25□□□□□ -1.09
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP10-8P60410 259 aa8.24□□□□□ -1.09
RTEL1-TNFRSF6B-203ENST00000492259 VWFP04275 2813 aa8.2□□□□□ -1.1
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP1-4P0C5Y4 121 aa8.18□□□□□ -1.1
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP13-3Q3SY46 172 aa8.12□□□□□ -1.11
RTEL1-TNFRSF6B-203ENST00000492259 TGP01266 2768 aa8.1□□□□□ -1.11
RTEL1-TNFRSF6B-203ENST00000492259 SRRM2Q9UQ35 2752 aaKnown RBP8.08□□□□□ -1.12
RTEL1-TNFRSF6B-203ENST00000492259 CSMD2Q7Z408 3487 aa8.02□□□□□ -1.13
RTEL1-TNFRSF6B-203ENST00000492259 TENM2Q9NT68 2774 aa8.01□□□□□ -1.13
RTEL1-TNFRSF6B-203ENST00000492259 ZFHX3Q15911 3703 aa8□□□□□ -1.13
RTEL1-TNFRSF6B-203ENST00000492259 OTOGQ6ZRI0 2925 aa7.99□□□□□ -1.13
RTEL1-TNFRSF6B-203ENST00000492259 NBPF19A0A087WUL8 3843 aa7.88□□□□□ -1.15
RTEL1-TNFRSF6B-203ENST00000492259 XP32Q5T750 250 aa7.87□□□□□ -1.15
RTEL1-TNFRSF6B-203ENST00000492259 TPRXLQ17RH7 258 aa7.84□□□□□ -1.15
RTEL1-TNFRSF6B-203ENST00000492259 VPS13CQ709C8 3753 aa7.78□□□□□ -1.16
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP12-2P59991 146 aa7.77□□□□□ -1.17
RTEL1-TNFRSF6B-203ENST00000492259 A0A1B0GVY2 172 aa7.76□□□□□ -1.17
RTEL1-TNFRSF6B-203ENST00000492259 FBN3Q75N90 2809 aa7.69□□□□□ -1.18
RTEL1-TNFRSF6B-203ENST00000492259 BSNQ9UPA5 3926 aa7.66□□□□□ -1.18
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP12-1P59990 96 aa7.65□□□□□ -1.18
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP13-4Q3LI77 160 aa7.65□□□□□ -1.19
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP3-1Q9BYR8 98 aa7.6□□□□□ -1.19
RTEL1-TNFRSF6B-203ENST00000492259 COL7A1Q02388 2944 aa7.59□□□□□ -1.19
RTEL1-TNFRSF6B-203ENST00000492259 TRRAPQ9Y4A5 3859 aa7.56□□□□□ -1.2
RTEL1-TNFRSF6B-203ENST00000492259 PRO2289Q9P1D8 64 aa7.54□□□□□ -1.2
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP10-10P60014 251 aa7.51□□□□□ -1.21
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP15-1Q3LI76 137 aa7.5□□□□□ -1.21
RTEL1-TNFRSF6B-203ENST00000492259 MEGF8Q7Z7M0 2845 aa7.47□□□□□ -1.21
RTEL1-TNFRSF6B-203ENST00000492259 ANK3Q12955 4377 aaKnown RBP7.45□□□□□ -1.22
RTEL1-TNFRSF6B-203ENST00000492259 INE1O15225 51 aa7.44□□□□□ -1.22
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP10-6P60371 365 aaPredicted RBP7.41□□□□□ -1.22
RTEL1-TNFRSF6B-203ENST00000492259 CSMD3Q7Z407 3707 aa7.23□□□□□ -1.25
RTEL1-TNFRSF6B-203ENST00000492259 AKAP9Q99996 3911 aa7.2□□□□□ -1.26
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP3-2Q9BYR7 98 aa7.18□□□□□ -1.26
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP3-3Q9BYR6 98 aa7.15□□□□□ -1.27
RTEL1-TNFRSF6B-203ENST00000492259 ZNF469Q96JG9 3925 aaPredicted RBP7.13□□□□□ -1.27
RTEL1-TNFRSF6B-203ENST00000492259 MT1HL1P0DM35 61 aa7.06□□□□□ -1.28
RTEL1-TNFRSF6B-203ENST00000492259 HUWE1Q7Z6Z7 4374 aaKnown RBP7□□□□□ -1.29
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP10-4P60372 401 aaPredicted RBP6.98□□□□□ -1.29
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP4-5Q9BYR2 181 aa6.79□□□□□ -1.32
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP23-1A1A580 65 aa6.78□□□□□ -1.32
RTEL1-TNFRSF6B-203ENST00000492259 ALMS1Q8TCU4 4167 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms