RNA–Protein interactions for RNA: ENST00000490904.6

MAP3K4-207, Transcript of mitogen-activated protein kinase kinase kinase 4, humanhuman

TSL 1 (best)

Gene MAP3K4, Length 5,451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP3K4-207ENST00000490904 NIPBLQ6KC79 2804 aaeCLIP7.7□□□□□ -1.18
MAP3K4-207ENST00000490904 RPS29P62273 56 aaKnown RBP7.69□□□□□ -1.18
MAP3K4-207ENST00000490904 COL6A3P12111 3177 aa7.67□□□□□ -1.18
MAP3K4-207ENST00000490904 KRTAP13-2Q52LG2 175 aa7.66□□□□□ -1.18
MAP3K4-207ENST00000490904 HIVEP1P15822 2718 aa7.64□□□□□ -1.19
MAP3K4-207ENST00000490904 M0QZ58 72 aa7.63□□□□□ -1.19
MAP3K4-207ENST00000490904 ZANQ9Y493 2812 aa7.62□□□□□ -1.19
MAP3K4-207ENST00000490904 KMT2BQ9UMN6 2715 aaPredicted RBP7.62□□□□□ -1.19
MAP3K4-207ENST00000490904 CFAP47Q6ZTR5 3102 aa7.61□□□□□ -1.19
MAP3K4-207ENST00000490904 CELSR2Q9HCU4 2923 aa7.61□□□□□ -1.19
MAP3K4-207ENST00000490904 KRTAP16-1A8MUX0 517 aa7.61□□□□□ -1.19
MAP3K4-207ENST00000490904 HRNRQ86YZ3 2850 aaPredicted RBP7.57□□□□□ -1.2
MAP3K4-207ENST00000490904 REV3LO60673 3130 aa7.55□□□□□ -1.2
MAP3K4-207ENST00000490904 SPEGQ15772 3267 aa7.53□□□□□ -1.2
MAP3K4-207ENST00000490904 SEC61BP60468 96 aaKnown RBP7.53□□□□□ -1.2
MAP3K4-207ENST00000490904 TNRC18O15417 2968 aaPredicted RBP7.53□□□□□ -1.2
MAP3K4-207ENST00000490904 A8MUU9 505 aa7.52□□□□□ -1.21
MAP3K4-207ENST00000490904 NDUFAF8A1L188 74 aa7.51□□□□□ -1.21
MAP3K4-207ENST00000490904 Q5VSD8 79 aa7.5□□□□□ -1.21
MAP3K4-207ENST00000490904 DCHS2Q6V1P9 2916 aa7.49□□□□□ -1.21
MAP3K4-207ENST00000490904 FBN2P35556 2912 aa7.45□□□□□ -1.22
MAP3K4-207ENST00000490904 C20orf166-AS1Q96NR2 134 aa7.44□□□□□ -1.22
MAP3K4-207ENST00000490904 NF1P21359 2839 aa7.43□□□□□ -1.22
MAP3K4-207ENST00000490904 EYSQ5T1H1 3165 aa7.41□□□□□ -1.22
MAP3K4-207ENST00000490904 DMXL1Q9Y485 3027 aa7.4□□□□□ -1.22
MAP3K4-207ENST00000490904 H0YAA0 97 aa7.39□□□□□ -1.23
MAP3K4-207ENST00000490904 LOC400499M0QZD8 3231 aa7.39□□□□□ -1.23
MAP3K4-207ENST00000490904 M0R2T5 61 aa7.38□□□□□ -1.23
MAP3K4-207ENST00000490904 SPTBN5Q9NRC6 3674 aaKnown RBP7.35□□□□□ -1.23
MAP3K4-207ENST00000490904 KRTAP1-4P0C5Y4 121 aa7.32□□□□□ -1.24
MAP3K4-207ENST00000490904 USP34Q70CQ2 3546 aa7.31□□□□□ -1.24
MAP3K4-207ENST00000490904 KRTAP13-3Q3SY46 172 aa7.3□□□□□ -1.24
MAP3K4-207ENST00000490904 PLAC4Q8WY50 150 aa7.29□□□□□ -1.24
MAP3K4-207ENST00000490904 MXRA5Q9NR99 2828 aa7.29□□□□□ -1.24
MAP3K4-207ENST00000490904 C10orf95Q9H7T3 257 aa7.24□□□□□ -1.25
MAP3K4-207ENST00000490904 TENM4Q6N022 2769 aa7.23□□□□□ -1.25
MAP3K4-207ENST00000490904 TENM3Q9P273 2699 aa7.19□□□□□ -1.26
MAP3K4-207ENST00000490904 CRYBG3Q68DQ2 2970 aa7.17□□□□□ -1.26
MAP3K4-207ENST00000490904 TGP01266 2768 aa7.17□□□□□ -1.26
MAP3K4-207ENST00000490904 P0C880 135 aa7.15□□□□□ -1.26
MAP3K4-207ENST00000490904 PP632Q6XCG6 107 aa7.14□□□□□ -1.27
MAP3K4-207ENST00000490904 MYO15AQ9UKN7 3530 aa7.13□□□□□ -1.27
MAP3K4-207ENST00000490904 TNP1P09430 55 aa7.12□□□□□ -1.27
MAP3K4-207ENST00000490904 CELSR1Q9NYQ6 3014 aa7.11□□□□□ -1.27
MAP3K4-207ENST00000490904 XP32Q5T750 250 aa7.08□□□□□ -1.28
MAP3K4-207ENST00000490904 DCHS1Q96JQ0 3298 aa7.01□□□□□ -1.29
MAP3K4-207ENST00000490904 PDZD2O15018 2839 aa7□□□□□ -1.29
MAP3K4-207ENST00000490904 TENM1Q9UKZ4 2725 aa7□□□□□ -1.29
MAP3K4-207ENST00000490904 WDFY3Q8IZQ1 3526 aa6.98□□□□□ -1.29
MAP3K4-207ENST00000490904 RELNP78509 3460 aa6.96□□□□□ -1.29
MAP3K4-207ENST00000490904 KRTAP10-8P60410 259 aa6.92□□□□□ -1.3
MAP3K4-207ENST00000490904 ZFHX4Q86UP3 3567 aa6.87□□□□□ -1.31
MAP3K4-207ENST00000490904 TPRXLQ17RH7 258 aa6.86□□□□□ -1.31
MAP3K4-207ENST00000490904 CSMD1Q96PZ7 3565 aa6.85□□□□□ -1.31
MAP3K4-207ENST00000490904 KRTAP12-2P59991 146 aa6.83□□□□□ -1.32
MAP3K4-207ENST00000490904 KRTAP3-1Q9BYR8 98 aa6.83□□□□□ -1.32
MAP3K4-207ENST00000490904 VWFP04275 2813 aa6.81□□□□□ -1.32
MAP3K4-207ENST00000490904 TENM2Q9NT68 2774 aa6.8□□□□□ -1.32
MAP3K4-207ENST00000490904 KRTAP21-3Q3LHN1 58 aa6.79□□□□□ -1.32
MAP3K4-207ENST00000490904 PKD1L1Q8TDX9 2849 aa6.78□□□□□ -1.32
MAP3K4-207ENST00000490904 KRTAP12-1P59990 96 aa6.76□□□□□ -1.33
MAP3K4-207ENST00000490904 ASPMQ8IZT6 3477 aa6.74□□□□□ -1.33
MAP3K4-207ENST00000490904 SMG1Q96Q15 3661 aaKnown RBP6.73□□□□□ -1.33
MAP3K4-207ENST00000490904 LAMA5O15230 3695 aa6.71□□□□□ -1.33
MAP3K4-207ENST00000490904 FBN1P35555 2871 aaKnown RBP6.67□□□□□ -1.34
MAP3K4-207ENST00000490904 KRTAP10-6P60371 365 aaPredicted RBP6.67□□□□□ -1.34
MAP3K4-207ENST00000490904 KRTAP13-4Q3LI77 160 aa6.65□□□□□ -1.34
MAP3K4-207ENST00000490904 A0A1B0GVY2 172 aa6.65□□□□□ -1.35
MAP3K4-207ENST00000490904 FBN3Q75N90 2809 aa6.62□□□□□ -1.35
MAP3K4-207ENST00000490904 SRRM2Q9UQ35 2752 aaKnown RBP6.59□□□□□ -1.36
MAP3K4-207ENST00000490904 SVEP1Q4LDE5 3571 aa6.55□□□□□ -1.36
MAP3K4-207ENST00000490904 OTOGQ6ZRI0 2925 aa6.54□□□□□ -1.36
MAP3K4-207ENST00000490904 MEGF8Q7Z7M0 2845 aa6.52□□□□□ -1.37
MAP3K4-207ENST00000490904 DMDP11532 3685 aa6.52□□□□□ -1.37
MAP3K4-207ENST00000490904 KRTAP15-1Q3LI76 137 aa6.52□□□□□ -1.37
MAP3K4-207ENST00000490904 KRTAP10-10P60014 251 aa6.47□□□□□ -1.37
MAP3K4-207ENST00000490904 KRTAP3-2Q9BYR7 98 aa6.45□□□□□ -1.38
MAP3K4-207ENST00000490904 MUC3AQ02505 3323 aa6.43□□□□□ -1.38
MAP3K4-207ENST00000490904 CUBNO60494 3623 aa6.43□□□□□ -1.38
MAP3K4-207ENST00000490904 ANK3Q12955 4377 aaKnown RBP6.43□□□□□ -1.38
MAP3K4-207ENST00000490904 KRTAP3-3Q9BYR6 98 aa6.41□□□□□ -1.38
MAP3K4-207ENST00000490904 PRO2289Q9P1D8 64 aa6.41□□□□□ -1.38
MAP3K4-207ENST00000490904 NBPF19A0A087WUL8 3843 aa6.39□□□□□ -1.39
MAP3K4-207ENST00000490904 COL7A1Q02388 2944 aa6.32□□□□□ -1.4
MAP3K4-207ENST00000490904 SPENQ96T58 3664 aaKnown RBP6.31□□□□□ -1.4
MAP3K4-207ENST00000490904 TRRAPQ9Y4A5 3859 aa6.29□□□□□ -1.4
MAP3K4-207ENST00000490904 CSMD2Q7Z408 3487 aa6.24□□□□□ -1.41
MAP3K4-207ENST00000490904 ZFHX3Q15911 3703 aa6.23□□□□□ -1.41
MAP3K4-207ENST00000490904 BSNQ9UPA5 3926 aa6.18□□□□□ -1.42
MAP3K4-207ENST00000490904 INE1O15225 51 aa6.15□□□□□ -1.42
MAP3K4-207ENST00000490904 KRTAP10-4P60372 401 aaPredicted RBP6.14□□□□□ -1.43
MAP3K4-207ENST00000490904 MT1HL1P0DM35 61 aa6.13□□□□□ -1.43
MAP3K4-207ENST00000490904 HUWE1Q7Z6Z7 4374 aaKnown RBP6.08□□□□□ -1.44
MAP3K4-207ENST00000490904 KRTAP23-1A1A580 65 aa6.05□□□□□ -1.44
MAP3K4-207ENST00000490904 VPS13CQ709C8 3753 aa6.05□□□□□ -1.44
MAP3K4-207ENST00000490904 LORP23490 312 aaPredicted RBP5.88□□□□□ -1.47
MAP3K4-207ENST00000490904 KRTAP10-12P60413 245 aa5.87□□□□□ -1.47
MAP3K4-207ENST00000490904 CSMD3Q7Z407 3707 aa5.82□□□□□ -1.48
MAP3K4-207ENST00000490904 KRTAP12-3P60328 96 aa5.81□□□□□ -1.48
MAP3K4-207ENST00000490904 LCE3AQ5TA76 89 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms