RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 KRTAP9-3Q9BYQ3 159 aa7.76□□□□□ -1.17
NUP58-213ENST00000490231 TSTD3H0UI37 97 aa7.75□□□□□ -1.17
NUP58-213ENST00000490231 DEFB116Q30KQ4 102 aa7.75□□□□□ -1.17
NUP58-213ENST00000490231 FCGBPQ9Y6R7 5405 aaPredicted RBP7.74□□□□□ -1.17
NUP58-213ENST00000490231 IGHV6-1A0A0B4J1U7 121 aa7.74□□□□□ -1.17
NUP58-213ENST00000490231 TMEM256-PLSCR3K7ERE1 68 aa7.74□□□□□ -1.17
NUP58-213ENST00000490231 KRTAP10-10P60014 251 aa7.74□□□□□ -1.17
NUP58-213ENST00000490231 KRTAP19-1Q8IUB9 90 aa7.74□□□□□ -1.17
NUP58-213ENST00000490231 A0A1B0GV72 72 aa7.73□□□□□ -1.17
NUP58-213ENST00000490231 M0R143 59 aa7.73□□□□□ -1.17
NUP58-213ENST00000490231 TRACP01848 142 aa7.73□□□□□ -1.17
NUP58-213ENST00000490231 CCKP06307 115 aa7.73□□□□□ -1.17
NUP58-213ENST00000490231 C8orf87E5RJ46 101 aa7.7□□□□□ -1.18
NUP58-213ENST00000490231 MTURNQ8N3F0 131 aa7.7□□□□□ -1.18
NUP58-213ENST00000490231 PSMB2P49721 201 aa7.69□□□□□ -1.18
NUP58-213ENST00000490231 A0A1B0GVX0 72 aa7.68□□□□□ -1.18
NUP58-213ENST00000490231 COX6CP09669 75 aa7.68□□□□□ -1.18
NUP58-213ENST00000490231 UBE2V1Q13404 147 aa7.68□□□□□ -1.18
NUP58-213ENST00000490231 ZCCHC13Q8WW36 166 aaKnown RBP7.65□□□□□ -1.18
NUP58-213ENST00000490231 NAA38Q9BRA0 125 aaKnown RBP7.65□□□□□ -1.18
NUP58-213ENST00000490231 TAX1BP3O14907 124 aa7.63□□□□□ -1.19
NUP58-213ENST00000490231 SPINK7P58062 85 aa7.63□□□□□ -1.19
NUP58-213ENST00000490231 VPS25Q9BRG1 176 aa7.63□□□□□ -1.19
NUP58-213ENST00000490231 J3KT08 172 aa7.62□□□□□ -1.19
NUP58-213ENST00000490231 SCGB1C2P0DMR2 95 aa7.62□□□□□ -1.19
NUP58-213ENST00000490231 RBM3P98179 157 aaKnown RBP7.62□□□□□ -1.19
NUP58-213ENST00000490231 C21orf62-AS1Q17RA5 79 aa7.61□□□□□ -1.19
NUP58-213ENST00000490231 DSCR8Q96T75 97 aa7.61□□□□□ -1.19
NUP58-213ENST00000490231 BATFQ16520 125 aa7.6□□□□□ -1.19
NUP58-213ENST00000490231 LINC00846Q9NV44 126 aa7.59□□□□□ -1.19
NUP58-213ENST00000490231 C9orf118A6NHY6 69 aa7.58□□□□□ -1.2
NUP58-213ENST00000490231 Q8N9P0 234 aaPredicted RBP7.58□□□□□ -1.2
NUP58-213ENST00000490231 KRTAP19-6Q3LI70 58 aa7.56□□□□□ -1.2
NUP58-213ENST00000490231 A8MWP4 228 aa7.55□□□□□ -1.2
NUP58-213ENST00000490231 C9JAW5 83 aa7.55□□□□□ -1.2
NUP58-213ENST00000490231 NDUFB1O75438 58 aa7.55□□□□□ -1.2
NUP58-213ENST00000490231 BAALC-AS2P0C853 105 aa7.55□□□□□ -1.2
NUP58-213ENST00000490231 ATXN8Q156A1 80 aa7.55□□□□□ -1.2
NUP58-213ENST00000490231 Q6ZQT0 140 aa7.55□□□□□ -1.2
NUP58-213ENST00000490231 MACF1Q9UPN3 7388 aaKnown RBP7.55□□□□□ -1.2
NUP58-213ENST00000490231 A0A1W2PPM0 123 aa7.53□□□□□ -1.2
NUP58-213ENST00000490231 SYNE2Q8WXH0 6885 aaKnown RBP7.52□□□□□ -1.2
NUP58-213ENST00000490231 WFDC13Q8IUB5 93 aa7.52□□□□□ -1.21
NUP58-213ENST00000490231 C8orf17Q9NRJ1 99 aa7.5□□□□□ -1.21
NUP58-213ENST00000490231 A0A1B0GW54 56 aa7.49□□□□□ -1.21
NUP58-213ENST00000490231 LYRM7Q5U5X0 104 aa7.48□□□□□ -1.21
NUP58-213ENST00000490231 COL5A1-AS1Q5SY13 56 aa7.47□□□□□ -1.21
NUP58-213ENST00000490231 IGKV3D-7A0A0C4DH55 119 aa7.45□□□□□ -1.22
NUP58-213ENST00000490231 PCP4L1A6NKN8 68 aa7.45□□□□□ -1.22
NUP58-213ENST00000490231 JMJD7-PLA2G4BH0Y9G9 81 aa7.45□□□□□ -1.22
NUP58-213ENST00000490231 Q6ZVQ6 151 aa7.44□□□□□ -1.22
NUP58-213ENST00000490231 LOC110117498A0A087WWA1 95 aa7.43□□□□□ -1.22
NUP58-213ENST00000490231 PDE6GP18545 87 aa7.42□□□□□ -1.22
NUP58-213ENST00000490231 SPCS1Q9Y6A9 102 aa7.41□□□□□ -1.22
NUP58-213ENST00000490231 H3BT86 120 aa7.4□□□□□ -1.22
NUP58-213ENST00000490231 PRR15Q8IV56 129 aa7.4□□□□□ -1.22
NUP58-213ENST00000490231 PRO0461Q9UI25 63 aa7.4□□□□□ -1.22
NUP58-213ENST00000490231 H1FX-AS1Q4G0G2 97 aa7.39□□□□□ -1.23
NUP58-213ENST00000490231 TMEM254Q8TBM7 123 aa7.37□□□□□ -1.23
NUP58-213ENST00000490231 MRPL34Q9BQ48 92 aaKnown RBP7.37□□□□□ -1.23
NUP58-213ENST00000490231 MMP24-AS1A0A0U1RRL7 71 aa7.36□□□□□ -1.23
NUP58-213ENST00000490231 K7EP34 96 aa7.36□□□□□ -1.23
NUP58-213ENST00000490231 C14orf132Q9NPU4 83 aa7.36□□□□□ -1.23
NUP58-213ENST00000490231 NREPQ16612 68 aa7.35□□□□□ -1.23
NUP58-213ENST00000490231 KRTAP6-3Q3LI67 103 aa7.35□□□□□ -1.23
NUP58-213ENST00000490231 hDV103S1A0JD37 113 aa7.31□□□□□ -1.24
NUP58-213ENST00000490231 NDUFS5O43920 106 aa7.29□□□□□ -1.24
NUP58-213ENST00000490231 K7EQZ3 153 aa7.28□□□□□ -1.24
NUP58-213ENST00000490231 KRTAP4-8Q9BYQ9 185 aa7.28□□□□□ -1.24
NUP58-213ENST00000490231 C7orf65Q6ZTY9 151 aa7.26□□□□□ -1.25
NUP58-213ENST00000490231 IGKV2D-30A0A075B6S6 120 aa7.25□□□□□ -1.25
NUP58-213ENST00000490231 IGKV2-30P06310 120 aa7.25□□□□□ -1.25
NUP58-213ENST00000490231 GTF2H5Q6ZYL4 71 aa7.24□□□□□ -1.25
NUP58-213ENST00000490231 Q5W150 140 aa7.23□□□□□ -1.25
NUP58-213ENST00000490231 F8W1H4 67 aa7.22□□□□□ -1.25
NUP58-213ENST00000490231 BPY2O14599 106 aa7.19□□□□□ -1.26
NUP58-213ENST00000490231 C4orf26Q17RF5 130 aa7.16□□□□□ -1.26
NUP58-213ENST00000490231 ETDBQ3ZM63 59 aa7.16□□□□□ -1.26
NUP58-213ENST00000490231 CASC2Q6XLA1 102 aa7.14□□□□□ -1.27
NUP58-213ENST00000490231 HCG22E2RYF7 251 aa7.13□□□□□ -1.27
NUP58-213ENST00000490231 A0A1B0GV90 55 aa7.11□□□□□ -1.27
NUP58-213ENST00000490231 A6NN06 94 aa7.11□□□□□ -1.27
NUP58-213ENST00000490231 CXCL6P80162 114 aa7.11□□□□□ -1.27
NUP58-213ENST00000490231 C5orf47Q569G3 176 aa7.11□□□□□ -1.27
NUP58-213ENST00000490231 Q8N9L7 120 aa7.11□□□□□ -1.27
NUP58-213ENST00000490231 FAM236AA0A1B0GUQ0 79 aa7.1□□□□□ -1.27
NUP58-213ENST00000490231 FAM236BA0A1B0GV22 79 aa7.1□□□□□ -1.27
NUP58-213ENST00000490231 MT1BP07438 61 aa7.09□□□□□ -1.27
NUP58-213ENST00000490231 NEBP20929 6669 aa7.08□□□□□ -1.28
NUP58-213ENST00000490231 Q5VV11 94 aa7.07□□□□□ -1.28
NUP58-213ENST00000490231 KRTAP3-1Q9BYR8 98 aa7.07□□□□□ -1.28
NUP58-213ENST00000490231 SPRR2GQ9BYE4 73 aa7.06□□□□□ -1.28
NUP58-213ENST00000490231 KRTAP19-8Q3LI54 63 aa7.05□□□□□ -1.28
NUP58-213ENST00000490231 S4R3F8 94 aa7.05□□□□□ -1.28
NUP58-213ENST00000490231 CSAG1Q6PB30 78 aa7.04□□□□□ -1.28
NUP58-213ENST00000490231 UBL5Q9BZL1 73 aa7.02□□□□□ -1.29
NUP58-213ENST00000490231 LCA10Q71F78 164 aa7.01□□□□□ -1.29
NUP58-213ENST00000490231 C1orf64Q8NEQ6 169 aa7.01□□□□□ -1.29
NUP58-213ENST00000490231 MUC12Q9UKN1 5478 aa7□□□□□ -1.29
NUP58-213ENST00000490231 KRTAP10-5P60370 271 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms