RNA–Protein interactions for RNA: ENST00000489585.5

LYST-211, Transcript of lysosomal trafficking regulator, humanhuman

TSL 1 (best)

Gene LYST, Length 7,069 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYST-211ENST00000489585 PKHD1L1Q86WI1 4243 aa2.4□□□□□ -2.03
LYST-211ENST00000489585 ZNF462Q96JM2 2506 aa2.39□□□□□ -2.03
LYST-211ENST00000489585 WNK1Q9H4A3 2382 aa2.39□□□□□ -2.03
LYST-211ENST00000489585 KRTAP10-8P60410 259 aa2.38□□□□□ -2.03
LYST-211ENST00000489585 ITPR1Q14643 2758 aa2.38□□□□□ -2.03
LYST-211ENST00000489585 PKHD1P08F94 4074 aa2.38□□□□□ -2.03
LYST-211ENST00000489585 NBASA2RRP1 2371 aa2.38□□□□□ -2.03
LYST-211ENST00000489585 TENM4Q6N022 2769 aa2.37□□□□□ -2.03
LYST-211ENST00000489585 FAT2Q9NYQ8 4349 aa2.37□□□□□ -2.03
LYST-211ENST00000489585 TNXBP22105 4242 aa2.37□□□□□ -2.03
LYST-211ENST00000489585 DNAH5Q8TE73 4624 aa2.36□□□□□ -2.03
LYST-211ENST00000489585 KRTAP10-1P60331 282 aa2.36□□□□□ -2.03
LYST-211ENST00000489585 OTOGLQ3ZCN5 2332 aa2.36□□□□□ -2.03
LYST-211ENST00000489585 PLECQ15149 4684 aaKnown RBP2.36□□□□□ -2.03
LYST-211ENST00000489585 ANKHD1Q8IWZ3 2542 aaKnown RBP2.35□□□□□ -2.03
LYST-211ENST00000489585 SRRM2Q9UQ35 2752 aaKnown RBP2.35□□□□□ -2.03
LYST-211ENST00000489585 MEGF8Q7Z7M0 2845 aa2.34□□□□□ -2.03
LYST-211ENST00000489585 C2CD3Q4AC94 2353 aa2.34□□□□□ -2.03
LYST-211ENST00000489585 PKD1P98161 4303 aa2.34□□□□□ -2.03
LYST-211ENST00000489585 HSPG2P98160 4391 aa2.34□□□□□ -2.03
LYST-211ENST00000489585 APCP25054 2843 aa2.34□□□□□ -2.04
LYST-211ENST00000489585 ACACAQ13085 2346 aa2.34□□□□□ -2.04
LYST-211ENST00000489585 Q6ZRN7 208 aaPredicted RBP2.33□□□□□ -2.04
LYST-211ENST00000489585 PRO2289Q9P1D8 64 aa2.33□□□□□ -2.04
LYST-211ENST00000489585 ZNF292O60281 2723 aa2.33□□□□□ -2.04
LYST-211ENST00000489585 INE1O15225 51 aa2.33□□□□□ -2.04
LYST-211ENST00000489585 VPS13BQ7Z7G8 4022 aa2.32□□□□□ -2.04
LYST-211ENST00000489585 NAV2Q8IVL1 2488 aa2.32□□□□□ -2.04
LYST-211ENST00000489585 FAM208BQ5VWN6 2430 aa2.32□□□□□ -2.04
LYST-211ENST00000489585 BDP1A6H8Y1 2624 aa2.32□□□□□ -2.04
LYST-211ENST00000489585 UTP20O75691 2785 aaKnown RBP2.32□□□□□ -2.04
LYST-211ENST00000489585 H0YAA0 97 aa2.31□□□□□ -2.04
LYST-211ENST00000489585 CSPG4Q6UVK1 2322 aa2.31□□□□□ -2.04
LYST-211ENST00000489585 KRTAP10-2P60368 255 aa2.31□□□□□ -2.04
LYST-211ENST00000489585 KRTAP1-5Q9BYS1 174 aa2.31□□□□□ -2.04
LYST-211ENST00000489585 KRTAP13-1Q8IUC0 172 aa2.3□□□□□ -2.04
LYST-211ENST00000489585 DOPEY1Q5JWR5 2465 aa2.29□□□□□ -2.04
LYST-211ENST00000489585 HIVEP3Q5T1R4 2406 aa2.29□□□□□ -2.04
LYST-211ENST00000489585 TTC28Q96AY4 2481 aa2.29□□□□□ -2.04
LYST-211ENST00000489585 SPG11Q96JI7 2443 aa2.28□□□□□ -2.04
LYST-211ENST00000489585 TEX15Q9BXT5 2789 aa2.28□□□□□ -2.04
LYST-211ENST00000489585 HIVEP1P15822 2718 aa2.27□□□□□ -2.05
LYST-211ENST00000489585 TPRXLQ17RH7 258 aa2.27□□□□□ -2.05
LYST-211ENST00000489585 LRP1Q07954 4544 aaKnown RBP2.27□□□□□ -2.05
LYST-211ENST00000489585 LRP1BQ9NZR2 4599 aa2.26□□□□□ -2.05
LYST-211ENST00000489585 KRTAP12-2P59991 146 aa2.26□□□□□ -2.05
LYST-211ENST00000489585 KRTAP13-2Q52LG2 175 aa2.26□□□□□ -2.05
LYST-211ENST00000489585 KRTAP3-2Q9BYR7 98 aa2.26□□□□□ -2.05
LYST-211ENST00000489585 UNC79Q9P2D8 2635 aa2.26□□□□□ -2.05
LYST-211ENST00000489585 ZANQ9Y493 2812 aa2.25□□□□□ -2.05
LYST-211ENST00000489585 KRTAP1-1Q07627 177 aa2.25□□□□□ -2.05
LYST-211ENST00000489585 APOBP04114 4563 aaKnown RBP2.24□□□□□ -2.05
LYST-211ENST00000489585 NOTCH2Q04721 2471 aa2.24□□□□□ -2.05
LYST-211ENST00000489585 STARD9Q9P2P6 4700 aa2.24□□□□□ -2.05
LYST-211ENST00000489585 F8P00451 2351 aa2.24□□□□□ -2.05
LYST-211ENST00000489585 PKD1L1Q8TDX9 2849 aa2.24□□□□□ -2.05
LYST-211ENST00000489585 ACACBO00763 2458 aa2.23□□□□□ -2.05
LYST-211ENST00000489585 KRTAP1-3Q8IUG1 177 aa2.23□□□□□ -2.05
LYST-211ENST00000489585 FLNCQ14315 2725 aa2.23□□□□□ -2.05
LYST-211ENST00000489585 DYNC1H1Q14204 4646 aaKnown RBP2.22□□□□□ -2.05
LYST-211ENST00000489585 UBR5O95071 2799 aaPredicted RBP2.22□□□□□ -2.05
LYST-211ENST00000489585 KRTAP13-4Q3LI77 160 aa2.22□□□□□ -2.05
LYST-211ENST00000489585 A0A1B0GVY2 172 aa2.21□□□□□ -2.06
LYST-211ENST00000489585 CACNA1AO00555 2505 aa2.21□□□□□ -2.06
LYST-211ENST00000489585 ZFHX2Q9C0A1 2572 aaPredicted RBP2.21□□□□□ -2.06
LYST-211ENST00000489585 SONP18583 2426 aaKnown RBP2.21□□□□□ -2.06
LYST-211ENST00000489585 FAT3Q8TDW7 4589 aa2.21□□□□□ -2.06
LYST-211ENST00000489585 ANKRD11Q6UB99 2663 aaPredicted RBP2.2□□□□□ -2.06
LYST-211ENST00000489585 KRTAP10-10P60014 251 aa2.2□□□□□ -2.06
LYST-211ENST00000489585 KRTAP3-1Q9BYR8 98 aa2.19□□□□□ -2.06
LYST-211ENST00000489585 RIF1Q5UIP0 2472 aaKnown RBP2.19□□□□□ -2.06
LYST-211ENST00000489585 FAT1Q14517 4588 aa2.19□□□□□ -2.06
LYST-211ENST00000489585 XP32Q5T750 250 aa2.19□□□□□ -2.06
LYST-211ENST00000489585 MYO9AB2RTY4 2548 aa2.18□□□□□ -2.06
LYST-211ENST00000489585 KRTAP23-1A1A580 65 aa2.18□□□□□ -2.06
LYST-211ENST00000489585 CEP295Q9C0D2 2601 aa2.18□□□□□ -2.06
LYST-211ENST00000489585 NCOR2Q9Y618 2525 aa2.18□□□□□ -2.06
LYST-211ENST00000489585 NBEAL2Q6ZNJ1 2754 aa2.18□□□□□ -2.06
LYST-211ENST00000489585 KRTAP10-7P60409 375 aaPredicted RBP2.16□□□□□ -2.06
LYST-211ENST00000489585 FLGP20930 4061 aaPredicted RBP2.16□□□□□ -2.06
LYST-211ENST00000489585 PIEZO1Q92508 2521 aa2.15□□□□□ -2.07
LYST-211ENST00000489585 HYDINQ4G0P3 5121 aa2.15□□□□□ -2.07
LYST-211ENST00000489585 CCDC168Q8NDH2 2452 aa2.14□□□□□ -2.07
LYST-211ENST00000489585 CENPEQ02224 2701 aa2.14□□□□□ -2.07
LYST-211ENST00000489585 KRTAP10-6P60371 365 aaPredicted RBP2.14□□□□□ -2.07
LYST-211ENST00000489585 MYO18BQ8IUG5 2567 aa2.13□□□□□ -2.07
LYST-211ENST00000489585 FN1P02751 2386 aaKnown RBP2.13□□□□□ -2.07
LYST-211ENST00000489585 PTPN13Q12923 2485 aa2.12□□□□□ -2.07
LYST-211ENST00000489585 SPRR5A0A1B0GTR4 108 aa2.12□□□□□ -2.07
LYST-211ENST00000489585 PKD1L2Q7Z442 2459 aa2.12□□□□□ -2.07
LYST-211ENST00000489585 ANKRD17O75179 2603 aaKnown RBP2.12□□□□□ -2.07
LYST-211ENST00000489585 HECTD1Q9ULT8 2610 aa2.12□□□□□ -2.07
LYST-211ENST00000489585 SPTBN4Q9H254 2564 aa2.12□□□□□ -2.07
LYST-211ENST00000489585 ACANP16112 2415 aa2.11□□□□□ -2.07
LYST-211ENST00000489585 FLG2Q5D862 2391 aaPredicted RBP2.11□□□□□ -2.07
LYST-211ENST00000489585 KRTAP3-3Q9BYR6 98 aa2.11□□□□□ -2.07
LYST-211ENST00000489585 ITPR3Q14573 2671 aa2.1□□□□□ -2.07
LYST-211ENST00000489585 TENM1Q9UKZ4 2725 aa2.1□□□□□ -2.07
LYST-211ENST00000489585 MUC6Q6W4X9 2439 aa2.1□□□□□ -2.07
LYST-211ENST00000489585 CHD8Q9HCK8 2581 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms