RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 LINC00472Q9H8W2 130 aa6.43□□□□□ -1.38
SRRM1-216ENST00000489130 TMA7Q9Y2S6 64 aaKnown RBP6.43□□□□□ -1.38
SRRM1-216ENST00000489130 TRBV20-1A0A075B6N2 111 aa6.4□□□□□ -1.38
SRRM1-216ENST00000489130 DEFB116Q30KQ4 102 aa6.4□□□□□ -1.38
SRRM1-216ENST00000489130 NOTCH2NLQ7Z3S9 236 aa6.4□□□□□ -1.38
SRRM1-216ENST00000489130 SCGB1C2P0DMR2 95 aa6.39□□□□□ -1.39
SRRM1-216ENST00000489130 RBM3P98179 157 aaKnown RBP6.39□□□□□ -1.39
SRRM1-216ENST00000489130 KRTAP4-2Q9BYR5 136 aa6.39□□□□□ -1.39
SRRM1-216ENST00000489130 DSCR8Q96T75 97 aa6.37□□□□□ -1.39
SRRM1-216ENST00000489130 IGHV6-1A0A0B4J1U7 121 aa6.36□□□□□ -1.39
SRRM1-216ENST00000489130 VPS25Q9BRG1 176 aa6.36□□□□□ -1.39
SRRM1-216ENST00000489130 A0A1B0GVX0 72 aa6.34□□□□□ -1.39
SRRM1-216ENST00000489130 C8orf87E5RJ46 101 aa6.34□□□□□ -1.39
SRRM1-216ENST00000489130 BAALC-AS2P0C853 105 aa6.34□□□□□ -1.39
SRRM1-216ENST00000489130 C9JAW5 83 aa6.33□□□□□ -1.4
SRRM1-216ENST00000489130 C21orf62-AS1Q17RA5 79 aa6.33□□□□□ -1.4
SRRM1-216ENST00000489130 MPLKIPQ8TAP9 179 aa6.32□□□□□ -1.4
SRRM1-216ENST00000489130 KRTAP9-8Q9BYQ0 159 aa6.32□□□□□ -1.4
SRRM1-216ENST00000489130 J3KT08 172 aa6.31□□□□□ -1.4
SRRM1-216ENST00000489130 M0R143 59 aa6.31□□□□□ -1.4
SRRM1-216ENST00000489130 HRES1P13985 223 aa6.31□□□□□ -1.4
SRRM1-216ENST00000489130 Q6ZQT0 140 aa6.31□□□□□ -1.4
SRRM1-216ENST00000489130 ATXN8Q156A1 80 aa6.3□□□□□ -1.4
SRRM1-216ENST00000489130 FAM236DA0A1B0GTK5 79 aa6.29□□□□□ -1.4
SRRM1-216ENST00000489130 FAM236CP0DP71 79 aa6.29□□□□□ -1.4
SRRM1-216ENST00000489130 RBM12B-AS1Q9P1G2 102 aa6.28□□□□□ -1.4
SRRM1-216ENST00000489130 LOC110117498A0A087WWA1 95 aa6.27□□□□□ -1.41
SRRM1-216ENST00000489130 A0A1B0GW54 56 aa6.27□□□□□ -1.41
SRRM1-216ENST00000489130 JMJD7-PLA2G4BH0Y9G9 81 aa6.27□□□□□ -1.41
SRRM1-216ENST00000489130 LCE4AQ5TA78 99 aa6.27□□□□□ -1.41
SRRM1-216ENST00000489130 NAA38Q9BRA0 125 aaKnown RBP6.27□□□□□ -1.41
SRRM1-216ENST00000489130 PDE6GP18545 87 aa6.25□□□□□ -1.41
SRRM1-216ENST00000489130 ZCCHC13Q8WW36 166 aaKnown RBP6.25□□□□□ -1.41
SRRM1-216ENST00000489130 NDUFB1O75438 58 aa6.24□□□□□ -1.41
SRRM1-216ENST00000489130 SMIM6P0DI80 62 aa6.24□□□□□ -1.41
SRRM1-216ENST00000489130 A8MWP4 228 aa6.23□□□□□ -1.41
SRRM1-216ENST00000489130 Q8N9P0 234 aaPredicted RBP6.23□□□□□ -1.41
SRRM1-216ENST00000489130 MT2AP02795 61 aa6.22□□□□□ -1.41
SRRM1-216ENST00000489130 LYRM7Q5U5X0 104 aa6.21□□□□□ -1.42
SRRM1-216ENST00000489130 C14orf132Q9NPU4 83 aa6.21□□□□□ -1.42
SRRM1-216ENST00000489130 C8orf17Q9NRJ1 99 aa6.21□□□□□ -1.42
SRRM1-216ENST00000489130 SPINK7P58062 85 aa6.2□□□□□ -1.42
SRRM1-216ENST00000489130 IGKV3D-7A0A0C4DH55 119 aa6.19□□□□□ -1.42
SRRM1-216ENST00000489130 MTURNQ8N3F0 131 aa6.19□□□□□ -1.42
SRRM1-216ENST00000489130 KRTAP4-11Q9BYQ6 195 aa6.18□□□□□ -1.42
SRRM1-216ENST00000489130 TSTD3H0UI37 97 aa6.17□□□□□ -1.42
SRRM1-216ENST00000489130 MT1FP04733 61 aa6.17□□□□□ -1.42
SRRM1-216ENST00000489130 PRR15Q8IV56 129 aa6.17□□□□□ -1.42
SRRM1-216ENST00000489130 Q6ZVQ6 151 aa6.16□□□□□ -1.42
SRRM1-216ENST00000489130 NREPQ16612 68 aa6.15□□□□□ -1.42
SRRM1-216ENST00000489130 BATFQ16520 125 aa6.14□□□□□ -1.43
SRRM1-216ENST00000489130 MMP24-AS1A0A0U1RRL7 71 aa6.12□□□□□ -1.43
SRRM1-216ENST00000489130 H3BT86 120 aa6.12□□□□□ -1.43
SRRM1-216ENST00000489130 KRTAP10-10P60014 251 aa6.12□□□□□ -1.43
SRRM1-216ENST00000489130 WFDC13Q8IUB5 93 aa6.12□□□□□ -1.43
SRRM1-216ENST00000489130 KRTAP9-3Q9BYQ3 159 aa6.12□□□□□ -1.43
SRRM1-216ENST00000489130 C9orf118A6NHY6 69 aa6.11□□□□□ -1.43
SRRM1-216ENST00000489130 TMEM254Q8TBM7 123 aa6.11□□□□□ -1.43
SRRM1-216ENST00000489130 MRPL34Q9BQ48 92 aaKnown RBP6.11□□□□□ -1.43
SRRM1-216ENST00000489130 USH2AO75445 5202 aa6.11□□□□□ -1.43
SRRM1-216ENST00000489130 A0A1W2PPM0 123 aa6.09□□□□□ -1.43
SRRM1-216ENST00000489130 K7EQZ3 153 aa6.09□□□□□ -1.43
SRRM1-216ENST00000489130 TAX1BP3O14907 124 aa6.09□□□□□ -1.43
SRRM1-216ENST00000489130 hDV103S1A0JD37 113 aa6.07□□□□□ -1.44
SRRM1-216ENST00000489130 KRTAP9-7A8MTY7 169 aa6.06□□□□□ -1.44
SRRM1-216ENST00000489130 SSPOA2VEC9 5147 aa6.06□□□□□ -1.44
SRRM1-216ENST00000489130 LOC105371267A0A1B0GV96 52 aa6.05□□□□□ -1.44
SRRM1-216ENST00000489130 BPY2O14599 106 aa6.04□□□□□ -1.44
SRRM1-216ENST00000489130 NDUFS5O43920 106 aa6.03□□□□□ -1.44
SRRM1-216ENST00000489130 H1FX-AS1Q4G0G2 97 aa5.99□□□□□ -1.45
SRRM1-216ENST00000489130 SPCS1Q9Y6A9 102 aa5.99□□□□□ -1.45
SRRM1-216ENST00000489130 Q5W150 140 aa5.98□□□□□ -1.45
SRRM1-216ENST00000489130 Q8N9L7 120 aa5.98□□□□□ -1.45
SRRM1-216ENST00000489130 IGKV2D-30A0A075B6S6 120 aa5.97□□□□□ -1.45
SRRM1-216ENST00000489130 IGKV2-30P06310 120 aa5.97□□□□□ -1.45
SRRM1-216ENST00000489130 C7orf65Q6ZTY9 151 aa5.97□□□□□ -1.45
SRRM1-216ENST00000489130 CASC2Q6XLA1 102 aa5.96□□□□□ -1.46
SRRM1-216ENST00000489130 FCGBPQ9Y6R7 5405 aaPredicted RBP5.95□□□□□ -1.46
SRRM1-216ENST00000489130 HCG22E2RYF7 251 aa5.94□□□□□ -1.46
SRRM1-216ENST00000489130 LCE5AQ5TCM9 118 aa5.94□□□□□ -1.46
SRRM1-216ENST00000489130 LINC00846Q9NV44 126 aa5.92□□□□□ -1.46
SRRM1-216ENST00000489130 PRO0461Q9UI25 63 aa5.92□□□□□ -1.46
SRRM1-216ENST00000489130 CXCL6P80162 114 aa5.91□□□□□ -1.46
SRRM1-216ENST00000489130 KRTAP19-6Q3LI70 58 aa5.91□□□□□ -1.46
SRRM1-216ENST00000489130 COL5A1-AS1Q5SY13 56 aa5.91□□□□□ -1.46
SRRM1-216ENST00000489130 UBL5Q9BZL1 73 aa5.91□□□□□ -1.46
SRRM1-216ENST00000489130 K7EP34 96 aa5.89□□□□□ -1.47
SRRM1-216ENST00000489130 C4orf26Q17RF5 130 aa5.88□□□□□ -1.47
SRRM1-216ENST00000489130 MACF1Q9UPN3 7388 aaKnown RBP5.83□□□□□ -1.48
SRRM1-216ENST00000489130 KRTAP5-3Q6L8H2 238 aa5.81□□□□□ -1.48
SRRM1-216ENST00000489130 KRTAP3-1Q9BYR8 98 aa5.81□□□□□ -1.48
SRRM1-216ENST00000489130 GTF2H5Q6ZYL4 71 aa5.8□□□□□ -1.48
SRRM1-216ENST00000489130 TP53AIP1Q9HCN2 124 aa5.79□□□□□ -1.48
SRRM1-216ENST00000489130 F8W1H4 67 aa5.78□□□□□ -1.48
SRRM1-216ENST00000489130 C5orf47Q569G3 176 aa5.77□□□□□ -1.49
SRRM1-216ENST00000489130 C1orf64Q8NEQ6 169 aa5.76□□□□□ -1.49
SRRM1-216ENST00000489130 S4R3F8 94 aa5.76□□□□□ -1.49
SRRM1-216ENST00000489130 ETDBQ3ZM63 59 aa5.75□□□□□ -1.49
SRRM1-216ENST00000489130 SYNE2Q8WXH0 6885 aaKnown RBP5.74□□□□□ -1.49
SRRM1-216ENST00000489130 LCA10Q71F78 164 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms