RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 ANAPC13Q9BS18 74 aa3.57□□□□□ -1.84
VAMP3-203ENST00000487194 SMIM20Q8N5G0 67 aa3.56□□□□□ -1.84
VAMP3-203ENST00000487194 TNXBP22105 4242 aa3.56□□□□□ -1.84
VAMP3-203ENST00000487194 KRTAP9-6A0A140TA67 174 aa3.55□□□□□ -1.84
VAMP3-203ENST00000487194 HCG22E2RYF7 251 aa3.55□□□□□ -1.84
VAMP3-203ENST00000487194 LRP1Q07954 4544 aaKnown RBP3.54□□□□□ -1.84
VAMP3-203ENST00000487194 A0A1B0GVX0 72 aa3.54□□□□□ -1.84
VAMP3-203ENST00000487194 C1orf195Q5TG92 126 aa3.54□□□□□ -1.84
VAMP3-203ENST00000487194 TRAV7A0A075B6U4 112 aa3.52□□□□□ -1.85
VAMP3-203ENST00000487194 IGHV6-1A0A0B4J1U7 121 aa3.52□□□□□ -1.85
VAMP3-203ENST00000487194 C8orf87E5RJ46 101 aa3.52□□□□□ -1.85
VAMP3-203ENST00000487194 KRTAP10-8P60410 259 aa3.52□□□□□ -1.85
VAMP3-203ENST00000487194 CASC2Q6XLA1 102 aa3.52□□□□□ -1.85
VAMP3-203ENST00000487194 SERP2Q8N6R1 65 aa3.52□□□□□ -1.85
VAMP3-203ENST00000487194 C8orf17Q9NRJ1 99 aa3.52□□□□□ -1.85
VAMP3-203ENST00000487194 MMP24-AS1A0A0U1RRL7 71 aa3.51□□□□□ -1.85
VAMP3-203ENST00000487194 hDV103S1A0JD37 113 aa3.51□□□□□ -1.85
VAMP3-203ENST00000487194 KRTAP29-1A8MX34 341 aaPredicted RBP3.51□□□□□ -1.85
VAMP3-203ENST00000487194 UQCRQO14949 82 aa3.51□□□□□ -1.85
VAMP3-203ENST00000487194 COX7CP15954 63 aa3.51□□□□□ -1.85
VAMP3-203ENST00000487194 WFDC13Q8IUB5 93 aa3.51□□□□□ -1.85
VAMP3-203ENST00000487194 TMEM254Q8TBM7 123 aa3.5□□□□□ -1.85
VAMP3-203ENST00000487194 OXTP01178 125 aa3.49□□□□□ -1.85
VAMP3-203ENST00000487194 LINC00313P59037 77 aa3.49□□□□□ -1.85
VAMP3-203ENST00000487194 KRTAP4-5Q9BYR2 181 aa3.49□□□□□ -1.85
VAMP3-203ENST00000487194 OCR1Q9BZK8 76 aa3.49□□□□□ -1.85
VAMP3-203ENST00000487194 MRPL34Q9BQ48 92 aaKnown RBP3.48□□□□□ -1.85
VAMP3-203ENST00000487194 MYCBP2O75592 4640 aa3.48□□□□□ -1.85
VAMP3-203ENST00000487194 FLG2Q5D862 2391 aaPredicted RBP3.48□□□□□ -1.85
VAMP3-203ENST00000487194 CCDC179H3BU77 68 aa3.47□□□□□ -1.85
VAMP3-203ENST00000487194 TP53AIP1Q9HCN2 124 aa3.47□□□□□ -1.85
VAMP3-203ENST00000487194 C5orf47Q569G3 176 aa3.46□□□□□ -1.86
VAMP3-203ENST00000487194 NOTCH2NLQ7Z3S9 236 aa3.46□□□□□ -1.86
VAMP3-203ENST00000487194 KRTAP9-2Q9BYQ4 174 aa3.46□□□□□ -1.86
VAMP3-203ENST00000487194 NDUFS5O43920 106 aa3.45□□□□□ -1.86
VAMP3-203ENST00000487194 MT1HL1P0DM35 61 aa3.45□□□□□ -1.86
VAMP3-203ENST00000487194 MP68P56378 58 aa3.45□□□□□ -1.86
VAMP3-203ENST00000487194 FP248Q71RG6 208 aaPredicted RBP3.45□□□□□ -1.86
VAMP3-203ENST00000487194 C20orf197Q8N268 126 aa3.45□□□□□ -1.86
VAMP3-203ENST00000487194 H3BPC8 53 aa3.43□□□□□ -1.86
VAMP3-203ENST00000487194 NDUFC1O43677 76 aa3.43□□□□□ -1.86
VAMP3-203ENST00000487194 KLKP1Q107X0 134 aa3.43□□□□□ -1.86
VAMP3-203ENST00000487194 Q8N9P0 234 aaPredicted RBP3.43□□□□□ -1.86
VAMP3-203ENST00000487194 TRAV22A0A0B4J277 110 aa3.42□□□□□ -1.86
VAMP3-203ENST00000487194 KRTAP16-1A8MUX0 517 aa3.42□□□□□ -1.86
VAMP3-203ENST00000487194 H0Y9P7 68 aa3.42□□□□□ -1.86
VAMP3-203ENST00000487194 RETNLBQ9BQ08 111 aa3.42□□□□□ -1.86
VAMP3-203ENST00000487194 A0A0U1RQV1 116 aa3.41□□□□□ -1.86
VAMP3-203ENST00000487194 SNURFQ9Y675 71 aa3.4□□□□□ -1.87
VAMP3-203ENST00000487194 IGLV7-46A0A075B6I9 117 aa3.39□□□□□ -1.87
VAMP3-203ENST00000487194 C9orf92A6NGG3 77 aa3.39□□□□□ -1.87
VAMP3-203ENST00000487194 J3QL48 77 aa3.39□□□□□ -1.87
VAMP3-203ENST00000487194 C1orf64Q8NEQ6 169 aa3.39□□□□□ -1.87
VAMP3-203ENST00000487194 ZCCHC13Q8WW36 166 aaKnown RBP3.39□□□□□ -1.87
VAMP3-203ENST00000487194 LINC00208Q96KT6 92 aa3.39□□□□□ -1.87
VAMP3-203ENST00000487194 LOC101927531A0A1B0GV80 90 aa3.38□□□□□ -1.87
VAMP3-203ENST00000487194 A8MUU9 505 aa3.38□□□□□ -1.87
VAMP3-203ENST00000487194 TMEM258P61165 79 aa3.38□□□□□ -1.87
VAMP3-203ENST00000487194 C20orf166-AS1Q96NR2 134 aa3.38□□□□□ -1.87
VAMP3-203ENST00000487194 H7BZZ5 65 aa3.37□□□□□ -1.87
VAMP3-203ENST00000487194 KRTAP13-3Q3SY46 172 aa3.37□□□□□ -1.87
VAMP3-203ENST00000487194 CYSTM1Q9H1C7 97 aa3.37□□□□□ -1.87
VAMP3-203ENST00000487194 PRR4Q16378 134 aa3.36□□□□□ -1.87
VAMP3-203ENST00000487194 Q5W150 140 aa3.36□□□□□ -1.87
VAMP3-203ENST00000487194 Q75L30 129 aa3.36□□□□□ -1.87
VAMP3-203ENST00000487194 ATP5EP56381 51 aaPredicted RBP3.35□□□□□ -1.87
VAMP3-203ENST00000487194 MUC2Q02817 5179 aa3.34□□□□□ -1.87
VAMP3-203ENST00000487194 FAM236DA0A1B0GTK5 79 aa3.34□□□□□ -1.87
VAMP3-203ENST00000487194 FAM236CP0DP71 79 aa3.34□□□□□ -1.87
VAMP3-203ENST00000487194 IGKV2-30P06310 120 aa3.33□□□□□ -1.88
VAMP3-203ENST00000487194 TPRXLQ17RH7 258 aa3.33□□□□□ -1.88
VAMP3-203ENST00000487194 SPANXA2-OT1Q8N9U9 137 aa3.33□□□□□ -1.88
VAMP3-203ENST00000487194 CYP4F30PQ9H0H9 118 aa3.33□□□□□ -1.88
VAMP3-203ENST00000487194 HMCN2Q8NDA2 5059 aa3.33□□□□□ -1.88
VAMP3-203ENST00000487194 RNF213Q63HN8 5207 aa3.32□□□□□ -1.88
VAMP3-203ENST00000487194 RPL37P61927 97 aaKnown RBP3.32□□□□□ -1.88
VAMP3-203ENST00000487194 XP32Q5T750 250 aa3.32□□□□□ -1.88
VAMP3-203ENST00000487194 ATP11AUNQ6ZP68 121 aa3.32□□□□□ -1.88
VAMP3-203ENST00000487194 PCOTHQ58A44 107 aa3.31□□□□□ -1.88
VAMP3-203ENST00000487194 C7orf65Q6ZTY9 151 aa3.31□□□□□ -1.88
VAMP3-203ENST00000487194 IGKV2D-30A0A075B6S6 120 aa3.3□□□□□ -1.88
VAMP3-203ENST00000487194 LRP2P98164 4655 aa3.28□□□□□ -1.88
VAMP3-203ENST00000487194 LPAP08519 4548 aa3.28□□□□□ -1.88
VAMP3-203ENST00000487194 MUC17Q685J3 4493 aa3.28□□□□□ -1.88
VAMP3-203ENST00000487194 HRES1P13985 223 aa3.27□□□□□ -1.89
VAMP3-203ENST00000487194 RPS28P62857 69 aaKnown RBP3.27□□□□□ -1.89
VAMP3-203ENST00000487194 SERP1Q9Y6X1 66 aa3.27□□□□□ -1.89
VAMP3-203ENST00000487194 FAT4Q6V0I7 4981 aa3.26□□□□□ -1.89
VAMP3-203ENST00000487194 SPINK7P58062 85 aa3.26□□□□□ -1.89
VAMP3-203ENST00000487194 SEC61BP60468 96 aaKnown RBP3.24□□□□□ -1.89
VAMP3-203ENST00000487194 A8MUN3 132 aa3.23□□□□□ -1.89
VAMP3-203ENST00000487194 ACYP2P14621 99 aa3.23□□□□□ -1.89
VAMP3-203ENST00000487194 DMAC1Q96GE9 116 aa3.23□□□□□ -1.89
VAMP3-203ENST00000487194 C4orf26Q17RF5 130 aa3.2□□□□□ -1.9
VAMP3-203ENST00000487194 COA5Q86WW8 74 aa3.2□□□□□ -1.9
VAMP3-203ENST00000487194 SMIM26A0A096LP01 95 aa3.19□□□□□ -1.9
VAMP3-203ENST00000487194 COX6B2Q6YFQ2 88 aa3.19□□□□□ -1.9
VAMP3-203ENST00000487194 CRCT1Q9UGL9 99 aa3.19□□□□□ -1.9
VAMP3-203ENST00000487194 CHKB-CPT1BH3BT56 60 aa3.18□□□□□ -1.9
VAMP3-203ENST00000487194 RBM12B-AS1Q9P1G2 102 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms