RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 LRP1BQ9NZR2 4599 aa3.52□□□□□ -1.85
USP41-204ENST00000486536 APOBP04114 4563 aaKnown RBP3.51□□□□□ -1.85
USP41-204ENST00000486536 A0A1B0GV72 72 aa3.51□□□□□ -1.85
USP41-204ENST00000486536 A0A1B0GVX0 72 aa3.51□□□□□ -1.85
USP41-204ENST00000486536 FAM229BQ4G0N7 80 aa3.51□□□□□ -1.85
USP41-204ENST00000486536 KRTAP10-4P60372 401 aaPredicted RBP3.5□□□□□ -1.85
USP41-204ENST00000486536 Q6Q795 121 aa3.5□□□□□ -1.85
USP41-204ENST00000486536 IGFL1Q6UW32 110 aa3.49□□□□□ -1.85
USP41-204ENST00000486536 SSBP3-AS1Q7Z2R9 100 aa3.49□□□□□ -1.85
USP41-204ENST00000486536 UBR4Q5T4S7 5183 aa3.49□□□□□ -1.85
USP41-204ENST00000486536 A0A1W2PNM2 257 aa3.48□□□□□ -1.85
USP41-204ENST00000486536 KRTAP1-4P0C5Y4 121 aa3.48□□□□□ -1.85
USP41-204ENST00000486536 CRYGAP11844 174 aa3.48□□□□□ -1.85
USP41-204ENST00000486536 C9orf153Q5TBE3 101 aa3.48□□□□□ -1.85
USP41-204ENST00000486536 VPS25Q9BRG1 176 aa3.48□□□□□ -1.85
USP41-204ENST00000486536 CD164Q04900 197 aa3.47□□□□□ -1.85
USP41-204ENST00000486536 MOBPQ13875 183 aa3.47□□□□□ -1.85
USP41-204ENST00000486536 Q5VSD8 79 aa3.47□□□□□ -1.85
USP41-204ENST00000486536 UBL5Q9BZL1 73 aa3.47□□□□□ -1.85
USP41-204ENST00000486536 LINC00846Q9NV44 126 aa3.47□□□□□ -1.85
USP41-204ENST00000486536 ANAPC11Q9NYG5 84 aa3.47□□□□□ -1.85
USP41-204ENST00000486536 TRBV7-7A0A0K0K1E9 115 aa3.46□□□□□ -1.86
USP41-204ENST00000486536 PSPHP1O15172 72 aa3.46□□□□□ -1.86
USP41-204ENST00000486536 LINC00643Q86TS7 51 aa3.46□□□□□ -1.86
USP41-204ENST00000486536 A0A0U1RQV1 116 aa3.45□□□□□ -1.86
USP41-204ENST00000486536 NREPQ16612 68 aa3.45□□□□□ -1.86
USP41-204ENST00000486536 KRTAP13-2Q52LG2 175 aa3.45□□□□□ -1.86
USP41-204ENST00000486536 MYCBP2O75592 4640 aa3.45□□□□□ -1.86
USP41-204ENST00000486536 A0A087WSZ3 146 aa3.44□□□□□ -1.86
USP41-204ENST00000486536 ATP5EP2Q5VTU8 51 aa3.44□□□□□ -1.86
USP41-204ENST00000486536 SS18L2Q9UHA2 77 aa3.44□□□□□ -1.86
USP41-204ENST00000486536 FAT1Q14517 4588 aa3.44□□□□□ -1.86
USP41-204ENST00000486536 DMBT1Q9UGM3 2413 aaPredicted RBP3.44□□□□□ -1.86
USP41-204ENST00000486536 A0A0G2JQZ4 141 aa3.43□□□□□ -1.86
USP41-204ENST00000486536 DEFB116Q30KQ4 102 aa3.43□□□□□ -1.86
USP41-204ENST00000486536 C5orf47Q569G3 176 aa3.43□□□□□ -1.86
USP41-204ENST00000486536 SIGMAR1Q99720 223 aa3.43□□□□□ -1.86
USP41-204ENST00000486536 NDUFS5O43920 106 aa3.42□□□□□ -1.86
USP41-204ENST00000486536 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
USP41-204ENST00000486536 RPS29P62273 56 aaKnown RBP3.42□□□□□ -1.86
USP41-204ENST00000486536 Q5XG85 94 aa3.42□□□□□ -1.86
USP41-204ENST00000486536 SPAG11AQ6PDA7 123 aa3.42□□□□□ -1.86
USP41-204ENST00000486536 IMUPQ9GZP8 106 aa3.42□□□□□ -1.86
USP41-204ENST00000486536 BPY2O14599 106 aa3.41□□□□□ -1.86
USP41-204ENST00000486536 SPINK1P00995 79 aa3.41□□□□□ -1.86
USP41-204ENST00000486536 ASB16-AS1Q495Z4 193 aa3.41□□□□□ -1.86
USP41-204ENST00000486536 LIMD2Q9BT23 127 aa3.41□□□□□ -1.86
USP41-204ENST00000486536 J3KT08 172 aa3.4□□□□□ -1.87
USP41-204ENST00000486536 MT-ATP8P03928 68 aa3.4□□□□□ -1.87
USP41-204ENST00000486536 HRCT1Q6UXD1 115 aa3.4□□□□□ -1.87
USP41-204ENST00000486536 LINC00304Q8N9R0 145 aa3.4□□□□□ -1.87
USP41-204ENST00000486536 LINC00472Q9H8W2 130 aa3.4□□□□□ -1.87
USP41-204ENST00000486536 C8orf17Q9NRJ1 99 aa3.4□□□□□ -1.87
USP41-204ENST00000486536 HMCN2Q8NDA2 5059 aa3.39□□□□□ -1.87
USP41-204ENST00000486536 IGKV3D-7A0A0C4DH55 119 aa3.39□□□□□ -1.87
USP41-204ENST00000486536 VPS13BQ7Z7G8 4022 aa3.39□□□□□ -1.87
USP41-204ENST00000486536 IGHV6-1A0A0B4J1U7 121 aa3.38□□□□□ -1.87
USP41-204ENST00000486536 KRTAP10-8P60410 259 aa3.38□□□□□ -1.87
USP41-204ENST00000486536 PRO0628Q9UI54 55 aa3.38□□□□□ -1.87
USP41-204ENST00000486536 A8MU10 97 aa3.37□□□□□ -1.87
USP41-204ENST00000486536 SCGB1A1P11684 91 aa3.37□□□□□ -1.87
USP41-204ENST00000486536 Q96NJ1 140 aa3.37□□□□□ -1.87
USP41-204ENST00000486536 A8MWP4 228 aa3.36□□□□□ -1.87
USP41-204ENST00000486536 NDUFB1O75438 58 aa3.36□□□□□ -1.87
USP41-204ENST00000486536 IGKV4-1P06312 121 aa3.36□□□□□ -1.87
USP41-204ENST00000486536 HIST1H4AP62805 103 aaKnown RBP3.36□□□□□ -1.87
USP41-204ENST00000486536 C1orf195Q5TG92 126 aa3.35□□□□□ -1.87
USP41-204ENST00000486536 PRR15Q8IV56 129 aa3.35□□□□□ -1.87
USP41-204ENST00000486536 SRRM2Q9UQ35 2752 aaKnown RBP3.34□□□□□ -1.87
USP41-204ENST00000486536 K7EQZ3 153 aa3.34□□□□□ -1.87
USP41-204ENST00000486536 A0A087WVE0 104 aa3.33□□□□□ -1.88
USP41-204ENST00000486536 MT1HL1P0DM35 61 aa3.33□□□□□ -1.88
USP41-204ENST00000486536 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
USP41-204ENST00000486536 FLG2Q5D862 2391 aaPredicted RBP3.33□□□□□ -1.88
USP41-204ENST00000486536 C8orf87E5RJ46 101 aa3.32□□□□□ -1.88
USP41-204ENST00000486536 Q5W150 140 aa3.32□□□□□ -1.88
USP41-204ENST00000486536 Q8N9L7 120 aa3.32□□□□□ -1.88
USP41-204ENST00000486536 PKHD1L1Q86WI1 4243 aa3.31□□□□□ -1.88
USP41-204ENST00000486536 FAM236AA0A1B0GUQ0 79 aa3.31□□□□□ -1.88
USP41-204ENST00000486536 FAM236BA0A1B0GV22 79 aa3.31□□□□□ -1.88
USP41-204ENST00000486536 HCG22E2RYF7 251 aa3.31□□□□□ -1.88
USP41-204ENST00000486536 ATOX1O00244 68 aa3.3□□□□□ -1.88
USP41-204ENST00000486536 SMIM20Q8N5G0 67 aa3.3□□□□□ -1.88
USP41-204ENST00000486536 MMP24-AS1A0A0U1RRL7 71 aa3.29□□□□□ -1.88
USP41-204ENST00000486536 hDV103S1A0JD37 113 aa3.29□□□□□ -1.88
USP41-204ENST00000486536 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
USP41-204ENST00000486536 CASC2Q6XLA1 102 aa3.29□□□□□ -1.88
USP41-204ENST00000486536 FP248Q71RG6 208 aaPredicted RBP3.29□□□□□ -1.88
USP41-204ENST00000486536 LRP1Q07954 4544 aaKnown RBP3.29□□□□□ -1.88
USP41-204ENST00000486536 LINC00313P59037 77 aa3.28□□□□□ -1.88
USP41-204ENST00000486536 TMEM254Q8TBM7 123 aa3.28□□□□□ -1.88
USP41-204ENST00000486536 FAT3Q8TDW7 4589 aa3.27□□□□□ -1.89
USP41-204ENST00000486536 RNF213Q63HN8 5207 aa3.27□□□□□ -1.89
USP41-204ENST00000486536 WFDC13Q8IUB5 93 aa3.27□□□□□ -1.89
USP41-204ENST00000486536 MRPL34Q9BQ48 92 aaKnown RBP3.27□□□□□ -1.89
USP41-204ENST00000486536 RBM12B-AS1Q9P1G2 102 aa3.27□□□□□ -1.89
USP41-204ENST00000486536 ANAPC13Q9BS18 74 aa3.26□□□□□ -1.89
USP41-204ENST00000486536 TP53AIP1Q9HCN2 124 aa3.26□□□□□ -1.89
USP41-204ENST00000486536 TRAV7A0A075B6U4 112 aa3.25□□□□□ -1.89
USP41-204ENST00000486536 SERP2Q8N6R1 65 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms