RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 ATRQ13535 2644 aa4.92□□□□□ -1.62
GABRE-209ENST00000486255 FLG2Q5D862 2391 aaPredicted RBP4.92□□□□□ -1.62
GABRE-209ENST00000486255 KALRNO60229 2985 aa4.92□□□□□ -1.62
GABRE-209ENST00000486255 RPS29P62273 56 aaKnown RBP4.92□□□□□ -1.62
GABRE-209ENST00000486255 KMT2BQ9UMN6 2715 aaPredicted RBP4.92□□□□□ -1.62
GABRE-209ENST00000486255 MUC3AQ02505 3323 aa4.91□□□□□ -1.62
GABRE-209ENST00000486255 COL12A1Q99715 3063 aa4.91□□□□□ -1.62
GABRE-209ENST00000486255 ZFHX4Q86UP3 3567 aa4.9□□□□□ -1.63
GABRE-209ENST00000486255 BAHCC1Q9P281 2608 aa4.89□□□□□ -1.63
GABRE-209ENST00000486255 MAST4O15021 2626 aa4.89□□□□□ -1.63
GABRE-209ENST00000486255 ZZEF1O43149 2961 aa4.88□□□□□ -1.63
GABRE-209ENST00000486255 NBEAQ8NFP9 2946 aa4.88□□□□□ -1.63
GABRE-209ENST00000486255 PP632Q6XCG6 107 aa4.87□□□□□ -1.63
GABRE-209ENST00000486255 SETXQ7Z333 2677 aaKnown RBP4.87□□□□□ -1.63
GABRE-209ENST00000486255 FBN2P35556 2912 aa4.86□□□□□ -1.63
GABRE-209ENST00000486255 TEP1Q99973 2627 aaKnown RBP4.84□□□□□ -1.63
GABRE-209ENST00000486255 Q6ZRN7 208 aaPredicted RBP4.84□□□□□ -1.64
GABRE-209ENST00000486255 LAMA5O15230 3695 aa4.83□□□□□ -1.64
GABRE-209ENST00000486255 ANK3Q12955 4377 aaKnown RBP4.83□□□□□ -1.64
GABRE-209ENST00000486255 GCN1Q92616 2671 aaKnown RBP4.82□□□□□ -1.64
GABRE-209ENST00000486255 CFAP47Q6ZTR5 3102 aa4.82□□□□□ -1.64
GABRE-209ENST00000486255 DCHS1Q96JQ0 3298 aa4.82□□□□□ -1.64
GABRE-209ENST00000486255 PDZD2O15018 2839 aa4.82□□□□□ -1.64
GABRE-209ENST00000486255 STAB1Q9NY15 2570 aa4.82□□□□□ -1.64
GABRE-209ENST00000486255 ASPMQ8IZT6 3477 aa4.81□□□□□ -1.64
GABRE-209ENST00000486255 P0C880 135 aa4.8□□□□□ -1.64
GABRE-209ENST00000486255 HIVEP1P15822 2718 aa4.8□□□□□ -1.64
GABRE-209ENST00000486255 NSD1Q96L73 2696 aaPredicted RBP4.79□□□□□ -1.64
GABRE-209ENST00000486255 KRTAP13-2Q52LG2 175 aa4.79□□□□□ -1.64
GABRE-209ENST00000486255 KRTAP7-1Q8IUC3 87 aa4.79□□□□□ -1.64
GABRE-209ENST00000486255 ITPR2Q14571 2701 aa4.78□□□□□ -1.64
GABRE-209ENST00000486255 RELNP78509 3460 aa4.77□□□□□ -1.65
GABRE-209ENST00000486255 TACC2O95359 2948 aa4.76□□□□□ -1.65
GABRE-209ENST00000486255 KRTAP13-1Q8IUC0 172 aa4.76□□□□□ -1.65
GABRE-209ENST00000486255 H0YAA0 97 aa4.76□□□□□ -1.65
GABRE-209ENST00000486255 CELSR2Q9HCU4 2923 aa4.75□□□□□ -1.65
GABRE-209ENST00000486255 TENM4Q6N022 2769 aa4.75□□□□□ -1.65
GABRE-209ENST00000486255 SPENQ96T58 3664 aaKnown RBP4.74□□□□□ -1.65
GABRE-209ENST00000486255 DCHS2Q6V1P9 2916 aa4.74□□□□□ -1.65
GABRE-209ENST00000486255 KRTAP10-8P60410 259 aa4.74□□□□□ -1.65
GABRE-209ENST00000486255 MAP1AP78559 2803 aaPredicted RBP4.73□□□□□ -1.65
GABRE-209ENST00000486255 ZANQ9Y493 2812 aa4.73□□□□□ -1.65
GABRE-209ENST00000486255 DMBT1Q9UGM3 2413 aaPredicted RBP4.72□□□□□ -1.65
GABRE-209ENST00000486255 SMG1Q96Q15 3661 aaKnown RBP4.71□□□□□ -1.66
GABRE-209ENST00000486255 NBEAL1Q6ZS30 2694 aa4.71□□□□□ -1.66
GABRE-209ENST00000486255 CRYBG3Q68DQ2 2970 aa4.68□□□□□ -1.66
GABRE-209ENST00000486255 COL6A5A8TX70 2615 aa4.68□□□□□ -1.66
GABRE-209ENST00000486255 MXRA5Q9NR99 2828 aa4.66□□□□□ -1.66
GABRE-209ENST00000486255 STAB2Q8WWQ8 2551 aa4.64□□□□□ -1.67
GABRE-209ENST00000486255 NBEAL2Q6ZNJ1 2754 aa4.63□□□□□ -1.67
GABRE-209ENST00000486255 OTOGQ6ZRI0 2925 aa4.63□□□□□ -1.67
GABRE-209ENST00000486255 A0A1B0GVY2 172 aa4.61□□□□□ -1.67
GABRE-209ENST00000486255 NOTCH1P46531 2555 aa4.59□□□□□ -1.67
GABRE-209ENST00000486255 NIPBLQ6KC79 2804 aaeCLIP4.59□□□□□ -1.672e-8■■■□□ 15.6
GABRE-209ENST00000486255 NBPF19A0A087WUL8 3843 aa4.57□□□□□ -1.68
GABRE-209ENST00000486255 AKAP9Q99996 3911 aa4.56□□□□□ -1.68
GABRE-209ENST00000486255 ASH1LQ9NR48 2969 aaKnown RBP4.56□□□□□ -1.68
GABRE-209ENST00000486255 XP32Q5T750 250 aa4.55□□□□□ -1.68
GABRE-209ENST00000486255 CELSR1Q9NYQ6 3014 aa4.54□□□□□ -1.68
GABRE-209ENST00000486255 PRO2289Q9P1D8 64 aa4.53□□□□□ -1.68
GABRE-209ENST00000486255 NF1P21359 2839 aa4.52□□□□□ -1.69
GABRE-209ENST00000486255 CSMD1Q96PZ7 3565 aa4.51□□□□□ -1.69
GABRE-209ENST00000486255 SVEP1Q4LDE5 3571 aa4.5□□□□□ -1.69
GABRE-209ENST00000486255 KRTAP10-10P60014 251 aa4.48□□□□□ -1.69
GABRE-209ENST00000486255 KRTAP12-2P59991 146 aa4.46□□□□□ -1.7
GABRE-209ENST00000486255 CSMD2Q7Z408 3487 aa4.46□□□□□ -1.7
GABRE-209ENST00000486255 KRTAP1-4P0C5Y4 121 aa4.45□□□□□ -1.7
GABRE-209ENST00000486255 HUWE1Q7Z6Z7 4374 aaKnown RBP4.44□□□□□ -1.7
GABRE-209ENST00000486255 TENM1Q9UKZ4 2725 aa4.43□□□□□ -1.7
GABRE-209ENST00000486255 VPS13CQ709C8 3753 aa4.43□□□□□ -1.7
GABRE-209ENST00000486255 FBN1P35555 2871 aaKnown RBP4.41□□□□□ -1.7
GABRE-209ENST00000486255 KRTAP13-4Q3LI77 160 aa4.4□□□□□ -1.7
GABRE-209ENST00000486255 TPRXLQ17RH7 258 aa4.4□□□□□ -1.71
GABRE-209ENST00000486255 ZNF469Q96JG9 3925 aaPredicted RBP4.39□□□□□ -1.71
GABRE-209ENST00000486255 ALMS1Q8TCU4 4167 aa4.38□□□□□ -1.71
GABRE-209ENST00000486255 TENM3Q9P273 2699 aa4.37□□□□□ -1.71
GABRE-209ENST00000486255 VWFP04275 2813 aa4.34□□□□□ -1.71
GABRE-209ENST00000486255 KRTAP13-3Q3SY46 172 aa4.33□□□□□ -1.72
GABRE-209ENST00000486255 TRRAPQ9Y4A5 3859 aa4.32□□□□□ -1.72
GABRE-209ENST00000486255 DNAH9Q9NYC9 4486 aa4.32□□□□□ -1.72
GABRE-209ENST00000486255 KRTAP12-1P59990 96 aa4.32□□□□□ -1.72
GABRE-209ENST00000486255 INE1O15225 51 aa4.32□□□□□ -1.72
GABRE-209ENST00000486255 ZFHX3Q15911 3703 aa4.31□□□□□ -1.72
GABRE-209ENST00000486255 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
GABRE-209ENST00000486255 DNAH3Q8TD57 4116 aa4.28□□□□□ -1.72
GABRE-209ENST00000486255 ANK2Q01484 3957 aa4.28□□□□□ -1.72
GABRE-209ENST00000486255 CUBNO60494 3623 aa4.25□□□□□ -1.73
GABRE-209ENST00000486255 CMYA5Q8N3K9 4069 aa4.23□□□□□ -1.73
GABRE-209ENST00000486255 DYNC2H1Q8NCM8 4307 aaKnown RBP4.19□□□□□ -1.74
GABRE-209ENST00000486255 VPS13DQ5THJ4 4388 aa4.17□□□□□ -1.74
GABRE-209ENST00000486255 DNAH6Q9C0G6 4158 aa4.15□□□□□ -1.75
GABRE-209ENST00000486255 PLECQ15149 4684 aaKnown RBP4.14□□□□□ -1.75
GABRE-209ENST00000486255 TENM2Q9NT68 2774 aa4.14□□□□□ -1.75
GABRE-209ENST00000486255 PKD1L1Q8TDX9 2849 aa4.13□□□□□ -1.75
GABRE-209ENST00000486255 DNAH1Q9P2D7 4330 aa4.12□□□□□ -1.75
GABRE-209ENST00000486255 KRTAP3-1Q9BYR8 98 aa4.12□□□□□ -1.75
GABRE-209ENST00000486255 DNAH17Q9UFH2 4485 aa4.12□□□□□ -1.75
GABRE-209ENST00000486255 DNAH10Q8IVF4 4471 aa4.11□□□□□ -1.75
GABRE-209ENST00000486255 KRTAP10-4P60372 401 aaPredicted RBP4.11□□□□□ -1.75
GABRE-209ENST00000486255 TGP01266 2768 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms