RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 RPS29P62273 56 aaKnown RBP8.2□□□□□ -1.1
COL9A1-207ENST00000486080 J3KT08 172 aa8.19□□□□□ -1.1
COL9A1-207ENST00000486080 LCE2DQ5TA82 110 aaPredicted RBP8.19□□□□□ -1.1
COL9A1-207ENST00000486080 A8MWP4 228 aa8.18□□□□□ -1.1
COL9A1-207ENST00000486080 DMBT1Q9UGM3 2413 aaPredicted RBP8.18□□□□□ -1.1
COL9A1-207ENST00000486080 OXTP01178 125 aa8.17□□□□□ -1.1
COL9A1-207ENST00000486080 PRR15Q8IV56 129 aa8.15□□□□□ -1.1
COL9A1-207ENST00000486080 RETNLBQ9BQ08 111 aa8.14□□□□□ -1.11
COL9A1-207ENST00000486080 NDUFB1O75438 58 aa8.13□□□□□ -1.11
COL9A1-207ENST00000486080 IGHV6-1A0A0B4J1U7 121 aa8.13□□□□□ -1.11
COL9A1-207ENST00000486080 FAM236AA0A1B0GUQ0 79 aa8.13□□□□□ -1.11
COL9A1-207ENST00000486080 FAM236BA0A1B0GV22 79 aa8.13□□□□□ -1.11
COL9A1-207ENST00000486080 KRTAP29-1A8MX34 341 aaPredicted RBP8.13□□□□□ -1.11
COL9A1-207ENST00000486080 A0A1B0GVX0 72 aa8.12□□□□□ -1.11
COL9A1-207ENST00000486080 NOTCH2NLQ7Z3S9 236 aa8.1□□□□□ -1.11
COL9A1-207ENST00000486080 HERC1Q15751 4861 aa8.09□□□□□ -1.11
COL9A1-207ENST00000486080 MMP24-AS1A0A0U1RRL7 71 aa8.08□□□□□ -1.12
COL9A1-207ENST00000486080 HCG22E2RYF7 251 aa8.08□□□□□ -1.12
COL9A1-207ENST00000486080 SCGB1A1P11684 91 aa8.08□□□□□ -1.12
COL9A1-207ENST00000486080 WFDC13Q8IUB5 93 aa8.08□□□□□ -1.12
COL9A1-207ENST00000486080 C8orf17Q9NRJ1 99 aa8.07□□□□□ -1.12
COL9A1-207ENST00000486080 CASC2Q6XLA1 102 aa8.03□□□□□ -1.12
COL9A1-207ENST00000486080 hDV103S1A0JD37 113 aa8.02□□□□□ -1.13
COL9A1-207ENST00000486080 LINC00313P59037 77 aa8.01□□□□□ -1.13
COL9A1-207ENST00000486080 C8orf87E5RJ46 101 aa8□□□□□ -1.13
COL9A1-207ENST00000486080 ATOX1O00244 68 aa7.99□□□□□ -1.13
COL9A1-207ENST00000486080 C9orf92A6NGG3 77 aa7.97□□□□□ -1.13
COL9A1-207ENST00000486080 KRTAP16-1A8MUX0 517 aa7.96□□□□□ -1.14
COL9A1-207ENST00000486080 FP248Q71RG6 208 aaPredicted RBP7.96□□□□□ -1.14
COL9A1-207ENST00000486080 TMEM254Q8TBM7 123 aa7.96□□□□□ -1.14
COL9A1-207ENST00000486080 MRPL34Q9BQ48 92 aaKnown RBP7.95□□□□□ -1.14
COL9A1-207ENST00000486080 ANAPC13Q9BS18 74 aa7.95□□□□□ -1.14
COL9A1-207ENST00000486080 IGLV7-46A0A075B6I9 117 aa7.94□□□□□ -1.14
COL9A1-207ENST00000486080 OCR1Q9BZK8 76 aa7.94□□□□□ -1.14
COL9A1-207ENST00000486080 PRR4Q16378 134 aa7.93□□□□□ -1.14
COL9A1-207ENST00000486080 NDUFS5O43920 106 aa7.91□□□□□ -1.14
COL9A1-207ENST00000486080 TRAV7A0A075B6U4 112 aa7.89□□□□□ -1.15
COL9A1-207ENST00000486080 SMIM20Q8N5G0 67 aa7.89□□□□□ -1.15
COL9A1-207ENST00000486080 SERP2Q8N6R1 65 aa7.89□□□□□ -1.15
COL9A1-207ENST00000486080 HMCN2Q8NDA2 5059 aa7.88□□□□□ -1.15
COL9A1-207ENST00000486080 KRTAP13-3Q3SY46 172 aa7.87□□□□□ -1.15
COL9A1-207ENST00000486080 Q8N9P0 234 aaPredicted RBP7.87□□□□□ -1.15
COL9A1-207ENST00000486080 COX7CP15954 63 aa7.84□□□□□ -1.15
COL9A1-207ENST00000486080 UQCRQO14949 82 aa7.83□□□□□ -1.16
COL9A1-207ENST00000486080 TP53AIP1Q9HCN2 124 aa7.83□□□□□ -1.16
COL9A1-207ENST00000486080 CCDC179H3BU77 68 aa7.82□□□□□ -1.16
COL9A1-207ENST00000486080 A8MUU9 505 aa7.81□□□□□ -1.16
COL9A1-207ENST00000486080 Q5W150 140 aa7.81□□□□□ -1.16
COL9A1-207ENST00000486080 C20orf166-AS1Q96NR2 134 aa7.81□□□□□ -1.16
COL9A1-207ENST00000486080 TPRXLQ17RH7 258 aa7.79□□□□□ -1.16
COL9A1-207ENST00000486080 XP32Q5T750 250 aa7.79□□□□□ -1.16
COL9A1-207ENST00000486080 LPAP08519 4548 aa7.79□□□□□ -1.16
COL9A1-207ENST00000486080 H0Y9P7 68 aa7.78□□□□□ -1.16
COL9A1-207ENST00000486080 C5orf47Q569G3 176 aa7.78□□□□□ -1.16
COL9A1-207ENST00000486080 TRAV22A0A0B4J277 110 aa7.77□□□□□ -1.17
COL9A1-207ENST00000486080 C20orf197Q8N268 126 aa7.77□□□□□ -1.17
COL9A1-207ENST00000486080 Q75L30 129 aa7.76□□□□□ -1.17
COL9A1-207ENST00000486080 SNURFQ9Y675 71 aa7.75□□□□□ -1.17
COL9A1-207ENST00000486080 MP68P56378 58 aa7.73□□□□□ -1.17
COL9A1-207ENST00000486080 A0A0U1RQV1 116 aa7.73□□□□□ -1.17
COL9A1-207ENST00000486080 ZCCHC13Q8WW36 166 aaKnown RBP7.73□□□□□ -1.17
COL9A1-207ENST00000486080 LINC00208Q96KT6 92 aa7.73□□□□□ -1.17
COL9A1-207ENST00000486080 CYSTM1Q9H1C7 97 aa7.72□□□□□ -1.17
COL9A1-207ENST00000486080 RPL37P61927 97 aaKnown RBP7.71□□□□□ -1.17
COL9A1-207ENST00000486080 LRP2P98164 4655 aa7.71□□□□□ -1.18
COL9A1-207ENST00000486080 C1orf64Q8NEQ6 169 aa7.71□□□□□ -1.18
COL9A1-207ENST00000486080 KLKP1Q107X0 134 aa7.68□□□□□ -1.18
COL9A1-207ENST00000486080 H3BPC8 53 aa7.66□□□□□ -1.18
COL9A1-207ENST00000486080 ATP11AUNQ6ZP68 121 aa7.66□□□□□ -1.18
COL9A1-207ENST00000486080 UBR4Q5T4S7 5183 aa7.64□□□□□ -1.19
COL9A1-207ENST00000486080 IGKV2D-30A0A075B6S6 120 aa7.63□□□□□ -1.19
COL9A1-207ENST00000486080 LOC101927531A0A1B0GV80 90 aa7.63□□□□□ -1.19
COL9A1-207ENST00000486080 IGKV2-30P06310 120 aa7.63□□□□□ -1.19
COL9A1-207ENST00000486080 CYP4F30PQ9H0H9 118 aa7.62□□□□□ -1.19
COL9A1-207ENST00000486080 PCOTHQ58A44 107 aa7.61□□□□□ -1.19
COL9A1-207ENST00000486080 H7BZZ5 65 aa7.59□□□□□ -1.19
COL9A1-207ENST00000486080 SPINK7P58062 85 aa7.56□□□□□ -1.2
COL9A1-207ENST00000486080 NDUFC1O43677 76 aa7.55□□□□□ -1.2
COL9A1-207ENST00000486080 C7orf65Q6ZTY9 151 aa7.55□□□□□ -1.2
COL9A1-207ENST00000486080 SEC61BP60468 96 aaKnown RBP7.52□□□□□ -1.21
COL9A1-207ENST00000486080 HRES1P13985 223 aa7.5□□□□□ -1.21
COL9A1-207ENST00000486080 MUC17Q685J3 4493 aa7.48□□□□□ -1.21
COL9A1-207ENST00000486080 TMEM258P61165 79 aa7.47□□□□□ -1.21
COL9A1-207ENST00000486080 RNF213Q63HN8 5207 aa7.46□□□□□ -1.22
COL9A1-207ENST00000486080 KRTAP4-1Q9BYQ7 146 aa7.45□□□□□ -1.22
COL9A1-207ENST00000486080 C4orf26Q17RF5 130 aa7.44□□□□□ -1.22
COL9A1-207ENST00000486080 SPANXA2-OT1Q8N9U9 137 aa7.44□□□□□ -1.22
COL9A1-207ENST00000486080 FAM236DA0A1B0GTK5 79 aa7.43□□□□□ -1.22
COL9A1-207ENST00000486080 FAM236CP0DP71 79 aa7.43□□□□□ -1.22
COL9A1-207ENST00000486080 MUC2Q02817 5179 aa7.4□□□□□ -1.23
COL9A1-207ENST00000486080 ATP5EP56381 51 aaPredicted RBP7.36□□□□□ -1.23
COL9A1-207ENST00000486080 KRTAP3-1Q9BYR8 98 aa7.36□□□□□ -1.23
COL9A1-207ENST00000486080 DMAC1Q96GE9 116 aa7.34□□□□□ -1.23
COL9A1-207ENST00000486080 COX6B2Q6YFQ2 88 aa7.34□□□□□ -1.24
COL9A1-207ENST00000486080 MPLKIPQ8TAP9 179 aa7.34□□□□□ -1.24
COL9A1-207ENST00000486080 ACYP2P14621 99 aa7.27□□□□□ -1.25
COL9A1-207ENST00000486080 RBM12B-AS1Q9P1G2 102 aa7.27□□□□□ -1.25
COL9A1-207ENST00000486080 A8MUN3 132 aa7.26□□□□□ -1.25
COL9A1-207ENST00000486080 H3BS24 57 aa7.26□□□□□ -1.25
COL9A1-207ENST00000486080 RPS28P62857 69 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms