RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 KRTAP16-1A8MUX0 517 aa6.91□□□□□ -1.3
SCAF4-206ENST00000485790 HSD52Q0P140 79 aa6.91□□□□□ -1.3
SCAF4-206ENST00000485790 C21orf62-AS1Q17RA5 79 aa6.9□□□□□ -1.3
SCAF4-206ENST00000485790 C8orf87E5RJ46 101 aa6.89□□□□□ -1.31
SCAF4-206ENST00000485790 SCGB1C2P0DMR2 95 aa6.89□□□□□ -1.31
SCAF4-206ENST00000485790 RBM3P98179 157 aaKnown RBP6.89□□□□□ -1.31
SCAF4-206ENST00000485790 NOTCH2NLQ7Z3S9 236 aa6.89□□□□□ -1.31
SCAF4-206ENST00000485790 DSCR8Q96T75 97 aa6.89□□□□□ -1.31
SCAF4-206ENST00000485790 USH2AO75445 5202 aa6.89□□□□□ -1.31
SCAF4-206ENST00000485790 VPS25Q9BRG1 176 aa6.88□□□□□ -1.31
SCAF4-206ENST00000485790 A0A1B0GVX0 72 aa6.86□□□□□ -1.31
SCAF4-206ENST00000485790 J3KT08 172 aa6.86□□□□□ -1.31
SCAF4-206ENST00000485790 K7ERJ3 54 aa6.86□□□□□ -1.31
SCAF4-206ENST00000485790 MPLKIPQ8TAP9 179 aa6.86□□□□□ -1.31
SCAF4-206ENST00000485790 HRES1P13985 223 aa6.85□□□□□ -1.31
SCAF4-206ENST00000485790 KRTAP10-10P60014 251 aa6.85□□□□□ -1.31
SCAF4-206ENST00000485790 NDUFB1O75438 58 aa6.84□□□□□ -1.31
SCAF4-206ENST00000485790 MT2AP02795 61 aa6.84□□□□□ -1.31
SCAF4-206ENST00000485790 KRTAP19-1Q8IUB9 90 aa6.84□□□□□ -1.31
SCAF4-206ENST00000485790 C9JAW5 83 aa6.83□□□□□ -1.32
SCAF4-206ENST00000485790 SSPOA2VEC9 5147 aa6.83□□□□□ -1.32
SCAF4-206ENST00000485790 BAALC-AS2P0C853 105 aa6.81□□□□□ -1.32
SCAF4-206ENST00000485790 LYRM7Q5U5X0 104 aa6.81□□□□□ -1.32
SCAF4-206ENST00000485790 ZCCHC13Q8WW36 166 aaKnown RBP6.81□□□□□ -1.32
SCAF4-206ENST00000485790 UQCR10Q9UDW1 63 aa6.81□□□□□ -1.32
SCAF4-206ENST00000485790 KRTAP9-7A8MTY7 169 aa6.8□□□□□ -1.32
SCAF4-206ENST00000485790 SPINK7P58062 85 aa6.8□□□□□ -1.32
SCAF4-206ENST00000485790 PYY3Q5JQD4 70 aa6.79□□□□□ -1.32
SCAF4-206ENST00000485790 Q6ZQT0 140 aa6.78□□□□□ -1.32
SCAF4-206ENST00000485790 MT1FP04733 61 aa6.77□□□□□ -1.33
SCAF4-206ENST00000485790 LINC00846Q9NV44 126 aa6.77□□□□□ -1.33
SCAF4-206ENST00000485790 A0A1B0GW54 56 aa6.76□□□□□ -1.33
SCAF4-206ENST00000485790 KRTAP9-3Q9BYQ3 159 aa6.75□□□□□ -1.33
SCAF4-206ENST00000485790 JMJD7-PLA2G4BH0Y9G9 81 aa6.74□□□□□ -1.33
SCAF4-206ENST00000485790 PDE6GP18545 87 aa6.74□□□□□ -1.33
SCAF4-206ENST00000485790 Q8N9P0 234 aaPredicted RBP6.74□□□□□ -1.33
SCAF4-206ENST00000485790 FCGBPQ9Y6R7 5405 aaPredicted RBP6.73□□□□□ -1.33
SCAF4-206ENST00000485790 A8MWP4 228 aa6.71□□□□□ -1.34
SCAF4-206ENST00000485790 ATXN8Q156A1 80 aa6.71□□□□□ -1.34
SCAF4-206ENST00000485790 KRTAP4-7Q9BYR0 210 aa6.69□□□□□ -1.34
SCAF4-206ENST00000485790 C8orf17Q9NRJ1 99 aa6.69□□□□□ -1.34
SCAF4-206ENST00000485790 LOC110117498A0A087WWA1 95 aa6.68□□□□□ -1.34
SCAF4-206ENST00000485790 NREPQ16612 68 aa6.67□□□□□ -1.34
SCAF4-206ENST00000485790 Q6ZVQ6 151 aa6.67□□□□□ -1.34
SCAF4-206ENST00000485790 WFDC13Q8IUB5 93 aa6.67□□□□□ -1.34
SCAF4-206ENST00000485790 M0R143 59 aa6.66□□□□□ -1.34
SCAF4-206ENST00000485790 IGKV3D-7A0A0C4DH55 119 aa6.65□□□□□ -1.34
SCAF4-206ENST00000485790 PRR15Q8IV56 129 aa6.64□□□□□ -1.35
SCAF4-206ENST00000485790 LCE1DQ5T752 114 aa6.63□□□□□ -1.35
SCAF4-206ENST00000485790 TMA7Q9Y2S6 64 aaKnown RBP6.62□□□□□ -1.35
SCAF4-206ENST00000485790 MRPL34Q9BQ48 92 aaKnown RBP6.6□□□□□ -1.35
SCAF4-206ENST00000485790 C14orf132Q9NPU4 83 aa6.6□□□□□ -1.35
SCAF4-206ENST00000485790 NDUFS5O43920 106 aa6.59□□□□□ -1.35
SCAF4-206ENST00000485790 H1FX-AS1Q4G0G2 97 aa6.59□□□□□ -1.35
SCAF4-206ENST00000485790 TMEM254Q8TBM7 123 aa6.59□□□□□ -1.35
SCAF4-206ENST00000485790 SYNE2Q8WXH0 6885 aaKnown RBP6.58□□□□□ -1.36
SCAF4-206ENST00000485790 NAA38Q9BRA0 125 aaKnown RBP6.58□□□□□ -1.36
SCAF4-206ENST00000485790 hDV103S1A0JD37 113 aa6.56□□□□□ -1.36
SCAF4-206ENST00000485790 KRTAP19-6Q3LI70 58 aa6.55□□□□□ -1.36
SCAF4-206ENST00000485790 MACF1Q9UPN3 7388 aaKnown RBP6.54□□□□□ -1.36
SCAF4-206ENST00000485790 MMP24-AS1A0A0U1RRL7 71 aa6.53□□□□□ -1.36
SCAF4-206ENST00000485790 BPY2O14599 106 aa6.51□□□□□ -1.37
SCAF4-206ENST00000485790 IGKV2D-30A0A075B6S6 120 aa6.5□□□□□ -1.37
SCAF4-206ENST00000485790 IGKV2-30P06310 120 aa6.5□□□□□ -1.37
SCAF4-206ENST00000485790 K7EQZ3 153 aa6.49□□□□□ -1.37
SCAF4-206ENST00000485790 C7orf65Q6ZTY9 151 aa6.48□□□□□ -1.37
SCAF4-206ENST00000485790 TSTD3H0UI37 97 aa6.47□□□□□ -1.37
SCAF4-206ENST00000485790 KRTAP4-9Q9BYQ8 210 aa6.47□□□□□ -1.37
SCAF4-206ENST00000485790 H3BT86 120 aa6.46□□□□□ -1.38
SCAF4-206ENST00000485790 BATFQ16520 125 aa6.46□□□□□ -1.38
SCAF4-206ENST00000485790 CASC2Q6XLA1 102 aa6.44□□□□□ -1.38
SCAF4-206ENST00000485790 Q5W150 140 aa6.43□□□□□ -1.38
SCAF4-206ENST00000485790 SMIM6P0DI80 62 aa6.42□□□□□ -1.38
SCAF4-206ENST00000485790 C9orf118A6NHY6 69 aa6.41□□□□□ -1.38
SCAF4-206ENST00000485790 CXCL6P80162 114 aa6.41□□□□□ -1.38
SCAF4-206ENST00000485790 KRTAP4-2Q9BYR5 136 aa6.41□□□□□ -1.38
SCAF4-206ENST00000485790 HCG22E2RYF7 251 aa6.4□□□□□ -1.38
SCAF4-206ENST00000485790 C4orf26Q17RF5 130 aa6.4□□□□□ -1.38
SCAF4-206ENST00000485790 A0A1W2PPM0 123 aa6.38□□□□□ -1.39
SCAF4-206ENST00000485790 KRTAP6-3Q3LI67 103 aa6.37□□□□□ -1.39
SCAF4-206ENST00000485790 Q8N9L7 120 aa6.36□□□□□ -1.39
SCAF4-206ENST00000485790 FAM236AA0A1B0GUQ0 79 aa6.35□□□□□ -1.39
SCAF4-206ENST00000485790 FAM236BA0A1B0GV22 79 aa6.35□□□□□ -1.39
SCAF4-206ENST00000485790 C5orf47Q569G3 176 aa6.34□□□□□ -1.39
SCAF4-206ENST00000485790 TAX1BP3O14907 124 aa6.33□□□□□ -1.4
SCAF4-206ENST00000485790 CSAG1Q6PB30 78 aa6.33□□□□□ -1.4
SCAF4-206ENST00000485790 UBL5Q9BZL1 73 aa6.33□□□□□ -1.4
SCAF4-206ENST00000485790 C1orf64Q8NEQ6 169 aa6.29□□□□□ -1.4
SCAF4-206ENST00000485790 SPCS1Q9Y6A9 102 aa6.29□□□□□ -1.4
SCAF4-206ENST00000485790 S4R3F8 94 aa6.29□□□□□ -1.4
SCAF4-206ENST00000485790 TP53AIP1Q9HCN2 124 aa6.27□□□□□ -1.41
SCAF4-206ENST00000485790 A6NN06 94 aa6.26□□□□□ -1.41
SCAF4-206ENST00000485790 Q5VV11 94 aa6.25□□□□□ -1.41
SCAF4-206ENST00000485790 KRTAP3-1Q9BYR8 98 aa6.24□□□□□ -1.41
SCAF4-206ENST00000485790 LCA10Q71F78 164 aa6.21□□□□□ -1.42
SCAF4-206ENST00000485790 SPRR2GQ9BYE4 73 aa6.2□□□□□ -1.42
SCAF4-206ENST00000485790 KRTAP4-11Q9BYQ6 195 aa6.2□□□□□ -1.42
SCAF4-206ENST00000485790 NEBP20929 6669 aa6.19□□□□□ -1.42
SCAF4-206ENST00000485790 COL5A1-AS1Q5SY13 56 aa6.17□□□□□ -1.42
SCAF4-206ENST00000485790 KLKP1Q107X0 134 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms