RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 DSCR8Q96T75 97 aa8.72□□□□□ -1.01
SMC4-216ENST00000485645 IGKV4-1P06312 121 aa8.69□□□□□ -1.02
SMC4-216ENST00000485645 KRTAP9-8Q9BYQ0 159 aa8.69□□□□□ -1.02
SMC4-216ENST00000485645 C9JAW5 83 aa8.67□□□□□ -1.02
SMC4-216ENST00000485645 VPS25Q9BRG1 176 aa8.67□□□□□ -1.02
SMC4-216ENST00000485645 KRTAP16-1A8MUX0 517 aa8.66□□□□□ -1.02
SMC4-216ENST00000485645 LINC00472Q9H8W2 130 aa8.66□□□□□ -1.02
SMC4-216ENST00000485645 FAM236DA0A1B0GTK5 79 aa8.65□□□□□ -1.02
SMC4-216ENST00000485645 C9orf118A6NHY6 69 aa8.65□□□□□ -1.02
SMC4-216ENST00000485645 JMJD7-PLA2G4BH0Y9G9 81 aa8.65□□□□□ -1.02
SMC4-216ENST00000485645 FAM236CP0DP71 79 aa8.65□□□□□ -1.02
SMC4-216ENST00000485645 USH2AO75445 5202 aa8.64□□□□□ -1.03
SMC4-216ENST00000485645 TAX1BP3O14907 124 aa8.63□□□□□ -1.03
SMC4-216ENST00000485645 C21orf62-AS1Q17RA5 79 aa8.63□□□□□ -1.03
SMC4-216ENST00000485645 DEFB116Q30KQ4 102 aa8.63□□□□□ -1.03
SMC4-216ENST00000485645 NOTCH2NLQ7Z3S9 236 aa8.62□□□□□ -1.03
SMC4-216ENST00000485645 Q6ZQT0 140 aa8.61□□□□□ -1.03
SMC4-216ENST00000485645 LOC110117498A0A087WWA1 95 aa8.6□□□□□ -1.03
SMC4-216ENST00000485645 A0A1W2PPM0 123 aa8.6□□□□□ -1.03
SMC4-216ENST00000485645 PDE6GP18545 87 aa8.6□□□□□ -1.03
SMC4-216ENST00000485645 RBM12B-AS1Q9P1G2 102 aa8.6□□□□□ -1.03
SMC4-216ENST00000485645 IGHV6-1A0A0B4J1U7 121 aa8.59□□□□□ -1.03
SMC4-216ENST00000485645 SSPOA2VEC9 5147 aa8.58□□□□□ -1.04
SMC4-216ENST00000485645 A0A1B0GW54 56 aa8.57□□□□□ -1.04
SMC4-216ENST00000485645 HRES1P13985 223 aa8.57□□□□□ -1.04
SMC4-216ENST00000485645 MPLKIPQ8TAP9 179 aa8.57□□□□□ -1.04
SMC4-216ENST00000485645 C14orf132Q9NPU4 83 aa8.56□□□□□ -1.04
SMC4-216ENST00000485645 H3BT86 120 aa8.55□□□□□ -1.04
SMC4-216ENST00000485645 MT2AP02795 61 aa8.55□□□□□ -1.04
SMC4-216ENST00000485645 J3KT08 172 aa8.54□□□□□ -1.04
SMC4-216ENST00000485645 A0A1B0GVX0 72 aa8.52□□□□□ -1.05
SMC4-216ENST00000485645 C8orf87E5RJ46 101 aa8.52□□□□□ -1.05
SMC4-216ENST00000485645 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.51□□□□□ -1.05
SMC4-216ENST00000485645 COL5A1-AS1Q5SY13 56 aa8.5□□□□□ -1.05
SMC4-216ENST00000485645 MTURNQ8N3F0 131 aa8.5□□□□□ -1.05
SMC4-216ENST00000485645 SPCS1Q9Y6A9 102 aa8.49□□□□□ -1.05
SMC4-216ENST00000485645 MT1FP04733 61 aa8.48□□□□□ -1.05
SMC4-216ENST00000485645 KRTAP9-7A8MTY7 169 aa8.47□□□□□ -1.05
SMC4-216ENST00000485645 NDUFB1O75438 58 aa8.46□□□□□ -1.06
SMC4-216ENST00000485645 KRTAP10-10P60014 251 aa8.46□□□□□ -1.06
SMC4-216ENST00000485645 ZCCHC13Q8WW36 166 aaKnown RBP8.45□□□□□ -1.06
SMC4-216ENST00000485645 NREPQ16612 68 aa8.44□□□□□ -1.06
SMC4-216ENST00000485645 KRTAP4-8Q9BYQ9 185 aa8.44□□□□□ -1.06
SMC4-216ENST00000485645 FCGBPQ9Y6R7 5405 aaPredicted RBP8.43□□□□□ -1.06
SMC4-216ENST00000485645 A8MWP4 228 aa8.43□□□□□ -1.06
SMC4-216ENST00000485645 KRTAP9-3Q9BYQ3 159 aa8.43□□□□□ -1.06
SMC4-216ENST00000485645 SPINK7P58062 85 aa8.41□□□□□ -1.06
SMC4-216ENST00000485645 IGKV3D-7A0A0C4DH55 119 aa8.39□□□□□ -1.07
SMC4-216ENST00000485645 K7EP34 96 aa8.38□□□□□ -1.07
SMC4-216ENST00000485645 C8orf17Q9NRJ1 99 aa8.38□□□□□ -1.07
SMC4-216ENST00000485645 PCP4L1A6NKN8 68 aa8.37□□□□□ -1.07
SMC4-216ENST00000485645 KRTAP19-1Q8IUB9 90 aa8.37□□□□□ -1.07
SMC4-216ENST00000485645 Q8N9P0 234 aaPredicted RBP8.37□□□□□ -1.07
SMC4-216ENST00000485645 PRR15Q8IV56 129 aa8.36□□□□□ -1.07
SMC4-216ENST00000485645 PRO0461Q9UI25 63 aa8.36□□□□□ -1.07
SMC4-216ENST00000485645 Q6ZVQ6 151 aa8.31□□□□□ -1.08
SMC4-216ENST00000485645 GTF2H5Q6ZYL4 71 aa8.3□□□□□ -1.08
SMC4-216ENST00000485645 WFDC13Q8IUB5 93 aa8.3□□□□□ -1.08
SMC4-216ENST00000485645 K7EQZ3 153 aa8.29□□□□□ -1.08
SMC4-216ENST00000485645 BPY2O14599 106 aa8.29□□□□□ -1.08
SMC4-216ENST00000485645 MMP24-AS1A0A0U1RRL7 71 aa8.28□□□□□ -1.08
SMC4-216ENST00000485645 TMEM254Q8TBM7 123 aa8.26□□□□□ -1.09
SMC4-216ENST00000485645 MRPL34Q9BQ48 92 aaKnown RBP8.25□□□□□ -1.09
SMC4-216ENST00000485645 F8W1H4 67 aa8.24□□□□□ -1.09
SMC4-216ENST00000485645 hDV103S1A0JD37 113 aa8.23□□□□□ -1.09
SMC4-216ENST00000485645 LINC00846Q9NV44 126 aa8.23□□□□□ -1.09
SMC4-216ENST00000485645 UBL5Q9BZL1 73 aa8.21□□□□□ -1.1
SMC4-216ENST00000485645 MACF1Q9UPN3 7388 aaKnown RBP8.2□□□□□ -1.1
SMC4-216ENST00000485645 Q8N9L7 120 aa8.19□□□□□ -1.1
SMC4-216ENST00000485645 KRTAP19-6Q3LI70 58 aa8.17□□□□□ -1.1
SMC4-216ENST00000485645 ETDBQ3ZM63 59 aa8.17□□□□□ -1.1
SMC4-216ENST00000485645 NDUFS5O43920 106 aa8.16□□□□□ -1.1
SMC4-216ENST00000485645 SYNE2Q8WXH0 6885 aaKnown RBP8.15□□□□□ -1.1
SMC4-216ENST00000485645 H1FX-AS1Q4G0G2 97 aa8.14□□□□□ -1.11
SMC4-216ENST00000485645 CASC2Q6XLA1 102 aa8.14□□□□□ -1.11
SMC4-216ENST00000485645 KRTAP4-12Q9BQ66 201 aa8.14□□□□□ -1.11
SMC4-216ENST00000485645 IGKV2D-30A0A075B6S6 120 aa8.07□□□□□ -1.12
SMC4-216ENST00000485645 HCG22E2RYF7 251 aa8.07□□□□□ -1.12
SMC4-216ENST00000485645 IGKV2-30P06310 120 aa8.07□□□□□ -1.12
SMC4-216ENST00000485645 Q5W150 140 aa8.06□□□□□ -1.12
SMC4-216ENST00000485645 CXCL6P80162 114 aa8.05□□□□□ -1.12
SMC4-216ENST00000485645 C7orf65Q6ZTY9 151 aa8.04□□□□□ -1.12
SMC4-216ENST00000485645 LCE3BQ5TA77 95 aa8.03□□□□□ -1.12
SMC4-216ENST00000485645 ACYP1P07311 99 aa8□□□□□ -1.13
SMC4-216ENST00000485645 FAM240AA0A1B0GVK7 77 aa7.97□□□□□ -1.13
SMC4-216ENST00000485645 C4orf26Q17RF5 130 aa7.94□□□□□ -1.14
SMC4-216ENST00000485645 TP53AIP1Q9HCN2 124 aa7.93□□□□□ -1.14
SMC4-216ENST00000485645 A0A1B0GV90 55 aa7.92□□□□□ -1.14
SMC4-216ENST00000485645 KRTAP6-3Q3LI67 103 aa7.9□□□□□ -1.14
SMC4-216ENST00000485645 ATP5EP2Q5VTU8 51 aa7.9□□□□□ -1.14
SMC4-216ENST00000485645 KRTAP9-9Q9BYP9 154 aa7.87□□□□□ -1.15
SMC4-216ENST00000485645 KRTAP9-4Q9BYQ2 154 aa7.87□□□□□ -1.15
SMC4-216ENST00000485645 C5orf47Q569G3 176 aa7.86□□□□□ -1.15
SMC4-216ENST00000485645 FAM236AA0A1B0GUQ0 79 aa7.85□□□□□ -1.15
SMC4-216ENST00000485645 FAM236BA0A1B0GV22 79 aa7.85□□□□□ -1.15
SMC4-216ENST00000485645 HIST1H4AP62805 103 aaKnown RBP7.82□□□□□ -1.16
SMC4-216ENST00000485645 LINC00643Q86TS7 51 aa7.81□□□□□ -1.16
SMC4-216ENST00000485645 KRTAP3-1Q9BYR8 98 aa7.8□□□□□ -1.16
SMC4-216ENST00000485645 S4R3F8 94 aa7.8□□□□□ -1.16
SMC4-216ENST00000485645 CSAG1Q6PB30 78 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms