RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 IGKV4-1P06312 121 aa10.42□□□□□ -0.74
ERCC2-205ENST00000485403 CXCL6P80162 114 aa10.42□□□□□ -0.74
ERCC2-205ENST00000485403 UBR4Q5T4S7 5183 aa10.41□□□□□ -0.74
ERCC2-205ENST00000485403 J3KT08 172 aa10.4□□□□□ -0.74
ERCC2-205ENST00000485403 ANAPC13Q9BS18 74 aa10.39□□□□□ -0.75
ERCC2-205ENST00000485403 FAM236AA0A1B0GUQ0 79 aa10.38□□□□□ -0.75
ERCC2-205ENST00000485403 FAM236BA0A1B0GV22 79 aa10.38□□□□□ -0.75
ERCC2-205ENST00000485403 FP248Q71RG6 208 aaPredicted RBP10.38□□□□□ -0.75
ERCC2-205ENST00000485403 HIST1H4AP62805 103 aaKnown RBP10.37□□□□□ -0.75
ERCC2-205ENST00000485403 IGLV7-46A0A075B6I9 117 aa10.34□□□□□ -0.75
ERCC2-205ENST00000485403 DSCR10P59022 87 aa10.34□□□□□ -0.75
ERCC2-205ENST00000485403 A8MWP4 228 aa10.33□□□□□ -0.76
ERCC2-205ENST00000485403 NDUFB1O75438 58 aa10.32□□□□□ -0.76
ERCC2-205ENST00000485403 A0A087WVE0 104 aa10.31□□□□□ -0.76
ERCC2-205ENST00000485403 ATOX1O00244 68 aa10.3□□□□□ -0.76
ERCC2-205ENST00000485403 TPRXLQ17RH7 258 aa10.3□□□□□ -0.76
ERCC2-205ENST00000485403 Q8N9L7 120 aa10.29□□□□□ -0.76
ERCC2-205ENST00000485403 K7EQZ3 153 aa10.28□□□□□ -0.76
ERCC2-205ENST00000485403 PRR15Q8IV56 129 aa10.28□□□□□ -0.76
ERCC2-205ENST00000485403 IGHV6-1A0A0B4J1U7 121 aa10.27□□□□□ -0.77
ERCC2-205ENST00000485403 A0A1B0GVX0 72 aa10.27□□□□□ -0.77
ERCC2-205ENST00000485403 KRTAP13-3Q3SY46 172 aa10.24□□□□□ -0.77
ERCC2-205ENST00000485403 C8orf87E5RJ46 101 aa10.2□□□□□ -0.78
ERCC2-205ENST00000485403 NOTCH2NLQ7Z3S9 236 aa10.19□□□□□ -0.78
ERCC2-205ENST00000485403 C8orf17Q9NRJ1 99 aa10.19□□□□□ -0.78
ERCC2-205ENST00000485403 LINC00313P59037 77 aa10.18□□□□□ -0.78
ERCC2-205ENST00000485403 C9orf92A6NGG3 77 aa10.16□□□□□ -0.78
ERCC2-205ENST00000485403 SERP2Q8N6R1 65 aa10.16□□□□□ -0.78
ERCC2-205ENST00000485403 RNF213Q63HN8 5207 aa10.15□□□□□ -0.78
ERCC2-205ENST00000485403 MMP24-AS1A0A0U1RRL7 71 aa10.15□□□□□ -0.78
ERCC2-205ENST00000485403 CCDC179H3BU77 68 aa10.15□□□□□ -0.78
ERCC2-205ENST00000485403 UQCRQO14949 82 aa10.15□□□□□ -0.78
ERCC2-205ENST00000485403 COX7CP15954 63 aa10.14□□□□□ -0.79
ERCC2-205ENST00000485403 SMIM20Q8N5G0 67 aa10.14□□□□□ -0.79
ERCC2-205ENST00000485403 HCG22E2RYF7 251 aa10.13□□□□□ -0.79
ERCC2-205ENST00000485403 WFDC13Q8IUB5 93 aa10.13□□□□□ -0.79
ERCC2-205ENST00000485403 hDV103S1A0JD37 113 aa10.11□□□□□ -0.79
ERCC2-205ENST00000485403 CASC2Q6XLA1 102 aa10.11□□□□□ -0.79
ERCC2-205ENST00000485403 MUC17Q685J3 4493 aa10.1□□□□□ -0.79
ERCC2-205ENST00000485403 TRAV7A0A075B6U4 112 aa10.08□□□□□ -0.8
ERCC2-205ENST00000485403 TMEM254Q8TBM7 123 aa10.07□□□□□ -0.8
ERCC2-205ENST00000485403 KRTAP16-1A8MUX0 517 aa10.07□□□□□ -0.8
ERCC2-205ENST00000485403 XP32Q5T750 250 aa10.06□□□□□ -0.8
ERCC2-205ENST00000485403 MRPL34Q9BQ48 92 aaKnown RBP10.05□□□□□ -0.8
ERCC2-205ENST00000485403 MUC2Q02817 5179 aa10.04□□□□□ -0.8
ERCC2-205ENST00000485403 NDUFS5O43920 106 aa9.98□□□□□ -0.81
ERCC2-205ENST00000485403 Q8N9P0 234 aaPredicted RBP9.98□□□□□ -0.81
ERCC2-205ENST00000485403 C20orf166-AS1Q96NR2 134 aa9.97□□□□□ -0.81
ERCC2-205ENST00000485403 OCR1Q9BZK8 76 aa9.97□□□□□ -0.81
ERCC2-205ENST00000485403 A8MUU9 505 aa9.96□□□□□ -0.82
ERCC2-205ENST00000485403 Q75L30 129 aa9.94□□□□□ -0.82
ERCC2-205ENST00000485403 SEC61BP60468 96 aaKnown RBP9.93□□□□□ -0.82
ERCC2-205ENST00000485403 RPL37P61927 97 aaKnown RBP9.91□□□□□ -0.82
ERCC2-205ENST00000485403 C20orf197Q8N268 126 aa9.91□□□□□ -0.82
ERCC2-205ENST00000485403 TP53AIP1Q9HCN2 124 aa9.88□□□□□ -0.83
ERCC2-205ENST00000485403 KLKP1Q107X0 134 aa9.87□□□□□ -0.83
ERCC2-205ENST00000485403 ATP11AUNQ6ZP68 121 aa9.84□□□□□ -0.83
ERCC2-205ENST00000485403 CYSTM1Q9H1C7 97 aa9.84□□□□□ -0.83
ERCC2-205ENST00000485403 ZCCHC13Q8WW36 166 aaKnown RBP9.83□□□□□ -0.84
ERCC2-205ENST00000485403 PCOTHQ58A44 107 aa9.82□□□□□ -0.84
ERCC2-205ENST00000485403 C5orf47Q569G3 176 aa9.82□□□□□ -0.84
ERCC2-205ENST00000485403 KRTAP4-1Q9BYQ7 146 aa9.82□□□□□ -0.84
ERCC2-205ENST00000485403 NDUFC1O43677 76 aa9.8□□□□□ -0.84
ERCC2-205ENST00000485403 TMEM258P61165 79 aa9.8□□□□□ -0.84
ERCC2-205ENST00000485403 Q5W150 140 aa9.8□□□□□ -0.84
ERCC2-205ENST00000485403 SNURFQ9Y675 71 aa9.8□□□□□ -0.84
ERCC2-205ENST00000485403 A0A0U1RQV1 116 aa9.79□□□□□ -0.84
ERCC2-205ENST00000485403 TRAV22A0A0B4J277 110 aa9.75□□□□□ -0.85
ERCC2-205ENST00000485403 H7BZZ5 65 aa9.75□□□□□ -0.85
ERCC2-205ENST00000485403 FAT4Q6V0I7 4981 aa9.74□□□□□ -0.85
ERCC2-205ENST00000485403 H0Y9P7 68 aa9.73□□□□□ -0.85
ERCC2-205ENST00000485403 MP68P56378 58 aa9.73□□□□□ -0.85
ERCC2-205ENST00000485403 H3BPC8 53 aa9.7□□□□□ -0.86
ERCC2-205ENST00000485403 FAM236DA0A1B0GTK5 79 aa9.65□□□□□ -0.86
ERCC2-205ENST00000485403 FAM236CP0DP71 79 aa9.65□□□□□ -0.86
ERCC2-205ENST00000485403 IGKV2D-30A0A075B6S6 120 aa9.64□□□□□ -0.87
ERCC2-205ENST00000485403 IGKV2-30P06310 120 aa9.64□□□□□ -0.87
ERCC2-205ENST00000485403 LINC00208Q96KT6 92 aa9.64□□□□□ -0.87
ERCC2-205ENST00000485403 C1orf64Q8NEQ6 169 aa9.63□□□□□ -0.87
ERCC2-205ENST00000485403 ATP5EP56381 51 aaPredicted RBP9.62□□□□□ -0.87
ERCC2-205ENST00000485403 LOC101927531A0A1B0GV80 90 aa9.61□□□□□ -0.87
ERCC2-205ENST00000485403 SPINK7P58062 85 aa9.61□□□□□ -0.87
ERCC2-205ENST00000485403 RPS28P62857 69 aaKnown RBP9.6□□□□□ -0.87
ERCC2-205ENST00000485403 C7orf65Q6ZTY9 151 aa9.6□□□□□ -0.87
ERCC2-205ENST00000485403 CYP4F30PQ9H0H9 118 aa9.56□□□□□ -0.88
ERCC2-205ENST00000485403 KRTAP19-2Q3LHN2 52 aa9.56□□□□□ -0.88
ERCC2-205ENST00000485403 LCE2CQ5TA81 110 aa9.51□□□□□ -0.89
ERCC2-205ENST00000485403 SERP1Q9Y6X1 66 aa9.51□□□□□ -0.89
ERCC2-205ENST00000485403 LCE2AQ5TA79 106 aaPredicted RBP9.5□□□□□ -0.89
ERCC2-205ENST00000485403 HRES1P13985 223 aa9.46□□□□□ -0.9
ERCC2-205ENST00000485403 SPANXA2-OT1Q8N9U9 137 aa9.46□□□□□ -0.9
ERCC2-205ENST00000485403 FLGP20930 4061 aaPredicted RBP9.41□□□□□ -0.9
ERCC2-205ENST00000485403 C4orf26Q17RF5 130 aa9.38□□□□□ -0.91
ERCC2-205ENST00000485403 RBM12B-AS1Q9P1G2 102 aa9.37□□□□□ -0.91
ERCC2-205ENST00000485403 COX6B2Q6YFQ2 88 aa9.36□□□□□ -0.91
ERCC2-205ENST00000485403 MPLKIPQ8TAP9 179 aa9.36□□□□□ -0.91
ERCC2-205ENST00000485403 MT1HP80294 61 aa9.34□□□□□ -0.91
ERCC2-205ENST00000485403 SMIM26A0A096LP01 95 aa9.29□□□□□ -0.92
ERCC2-205ENST00000485403 KRTAP3-1Q9BYR8 98 aa9.24□□□□□ -0.93
ERCC2-205ENST00000485403 A8MUN3 132 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms