RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 K7ERJ3 54 aa9.51□□□□□ -0.89
COL27A1-205ENST00000485397 KRTAP10-10P60014 251 aa9.51□□□□□ -0.89
COL27A1-205ENST00000485397 KRTAP19-1Q8IUB9 90 aa9.51□□□□□ -0.89
COL27A1-205ENST00000485397 CCKP06307 115 aa9.5□□□□□ -0.89
COL27A1-205ENST00000485397 TRACP01848 142 aa9.49□□□□□ -0.89
COL27A1-205ENST00000485397 COX6CP09669 75 aa9.49□□□□□ -0.89
COL27A1-205ENST00000485397 H3BQ85 93 aa9.48□□□□□ -0.89
COL27A1-205ENST00000485397 TMEM256-PLSCR3K7ERE1 68 aa9.48□□□□□ -0.89
COL27A1-205ENST00000485397 PSMB2P49721 201 aa9.47□□□□□ -0.89
COL27A1-205ENST00000485397 A0A1B0GVX0 72 aa9.42□□□□□ -0.9
COL27A1-205ENST00000485397 C8orf87E5RJ46 101 aa9.42□□□□□ -0.9
COL27A1-205ENST00000485397 UBE2V1Q13404 147 aa9.42□□□□□ -0.9
COL27A1-205ENST00000485397 VPS25Q9BRG1 176 aa9.42□□□□□ -0.9
COL27A1-205ENST00000485397 BATFQ16520 125 aa9.41□□□□□ -0.9
COL27A1-205ENST00000485397 SCGB1C2P0DMR2 95 aa9.39□□□□□ -0.91
COL27A1-205ENST00000485397 LYRM7Q5U5X0 104 aa9.39□□□□□ -0.91
COL27A1-205ENST00000485397 ZCCHC13Q8WW36 166 aaKnown RBP9.38□□□□□ -0.91
COL27A1-205ENST00000485397 MTURNQ8N3F0 131 aa9.37□□□□□ -0.91
COL27A1-205ENST00000485397 SPINK7P58062 85 aa9.36□□□□□ -0.91
COL27A1-205ENST00000485397 RBM3P98179 157 aaKnown RBP9.35□□□□□ -0.91
COL27A1-205ENST00000485397 DSCR8Q96T75 97 aa9.33□□□□□ -0.92
COL27A1-205ENST00000485397 PCP4L1A6NKN8 68 aa9.29□□□□□ -0.92
COL27A1-205ENST00000485397 J3KT08 172 aa9.29□□□□□ -0.92
COL27A1-205ENST00000485397 ATXN8Q156A1 80 aa9.28□□□□□ -0.92
COL27A1-205ENST00000485397 COL5A1-AS1Q5SY13 56 aa9.28□□□□□ -0.92
COL27A1-205ENST00000485397 Q8N9P0 234 aaPredicted RBP9.28□□□□□ -0.92
COL27A1-205ENST00000485397 MACF1Q9UPN3 7388 aaKnown RBP9.26□□□□□ -0.93
COL27A1-205ENST00000485397 C9JAW5 83 aa9.26□□□□□ -0.93
COL27A1-205ENST00000485397 Q6ZQT0 140 aa9.26□□□□□ -0.93
COL27A1-205ENST00000485397 C9orf118A6NHY6 69 aa9.25□□□□□ -0.93
COL27A1-205ENST00000485397 BAALC-AS2P0C853 105 aa9.25□□□□□ -0.93
COL27A1-205ENST00000485397 NAA38Q9BRA0 125 aaKnown RBP9.25□□□□□ -0.93
COL27A1-205ENST00000485397 SYNE2Q8WXH0 6885 aaKnown RBP9.25□□□□□ -0.93
COL27A1-205ENST00000485397 NDUFB1O75438 58 aa9.24□□□□□ -0.93
COL27A1-205ENST00000485397 KRTAP19-6Q3LI70 58 aa9.24□□□□□ -0.93
COL27A1-205ENST00000485397 WFDC13Q8IUB5 93 aa9.24□□□□□ -0.93
COL27A1-205ENST00000485397 C21orf62-AS1Q17RA5 79 aa9.23□□□□□ -0.93
COL27A1-205ENST00000485397 C8orf17Q9NRJ1 99 aa9.23□□□□□ -0.93
COL27A1-205ENST00000485397 A8MWP4 228 aa9.22□□□□□ -0.93
COL27A1-205ENST00000485397 TAX1BP3O14907 124 aa9.22□□□□□ -0.93
COL27A1-205ENST00000485397 LINC00846Q9NV44 126 aa9.22□□□□□ -0.93
COL27A1-205ENST00000485397 A0A1W2PPM0 123 aa9.2□□□□□ -0.94
COL27A1-205ENST00000485397 IGKV3D-7A0A0C4DH55 119 aa9.17□□□□□ -0.94
COL27A1-205ENST00000485397 Q6ZVQ6 151 aa9.14□□□□□ -0.95
COL27A1-205ENST00000485397 SPCS1Q9Y6A9 102 aa9.13□□□□□ -0.95
COL27A1-205ENST00000485397 LOC110117498A0A087WWA1 95 aa9.11□□□□□ -0.95
COL27A1-205ENST00000485397 JMJD7-PLA2G4BH0Y9G9 81 aa9.11□□□□□ -0.95
COL27A1-205ENST00000485397 A0A1B0GW54 56 aa9.09□□□□□ -0.95
COL27A1-205ENST00000485397 PRR15Q8IV56 129 aa9.09□□□□□ -0.95
COL27A1-205ENST00000485397 H3BT86 120 aa9.08□□□□□ -0.96
COL27A1-205ENST00000485397 GTF2H5Q6ZYL4 71 aa9.08□□□□□ -0.96
COL27A1-205ENST00000485397 C14orf132Q9NPU4 83 aa9.06□□□□□ -0.96
COL27A1-205ENST00000485397 MMP24-AS1A0A0U1RRL7 71 aa9.05□□□□□ -0.96
COL27A1-205ENST00000485397 PDE6GP18545 87 aa9.05□□□□□ -0.96
COL27A1-205ENST00000485397 H1FX-AS1Q4G0G2 97 aa9.05□□□□□ -0.96
COL27A1-205ENST00000485397 MRPL34Q9BQ48 92 aaKnown RBP9.05□□□□□ -0.96
COL27A1-205ENST00000485397 K7EP34 96 aa9.04□□□□□ -0.96
COL27A1-205ENST00000485397 NREPQ16612 68 aa9.03□□□□□ -0.96
COL27A1-205ENST00000485397 TMEM254Q8TBM7 123 aa9.03□□□□□ -0.96
COL27A1-205ENST00000485397 NDUFS5O43920 106 aa8.98□□□□□ -0.97
COL27A1-205ENST00000485397 KRTAP6-3Q3LI67 103 aa8.98□□□□□ -0.97
COL27A1-205ENST00000485397 hDV103S1A0JD37 113 aa8.97□□□□□ -0.97
COL27A1-205ENST00000485397 K7EQZ3 153 aa8.96□□□□□ -0.98
COL27A1-205ENST00000485397 IGKV2D-30A0A075B6S6 120 aa8.94□□□□□ -0.98
COL27A1-205ENST00000485397 IGKV2-30P06310 120 aa8.94□□□□□ -0.98
COL27A1-205ENST00000485397 F8W1H4 67 aa8.93□□□□□ -0.98
COL27A1-205ENST00000485397 Q5W150 140 aa8.92□□□□□ -0.98
COL27A1-205ENST00000485397 C7orf65Q6ZTY9 151 aa8.88□□□□□ -0.99
COL27A1-205ENST00000485397 PRO0461Q9UI25 63 aa8.87□□□□□ -0.99
COL27A1-205ENST00000485397 SMCPP49901 116 aaPredicted RBP8.85□□□□□ -0.99
COL27A1-205ENST00000485397 BPY2O14599 106 aa8.83□□□□□ -1
COL27A1-205ENST00000485397 C4orf26Q17RF5 130 aa8.82□□□□□ -1
COL27A1-205ENST00000485397 HCG22E2RYF7 251 aa8.79□□□□□ -1
COL27A1-205ENST00000485397 Q8N9L7 120 aa8.79□□□□□ -1
COL27A1-205ENST00000485397 A0A1B0GV90 55 aa8.77□□□□□ -1.01
COL27A1-205ENST00000485397 ETDBQ3ZM63 59 aa8.77□□□□□ -1.01
COL27A1-205ENST00000485397 CASC2Q6XLA1 102 aa8.77□□□□□ -1.01
COL27A1-205ENST00000485397 C5orf47Q569G3 176 aa8.76□□□□□ -1.01
COL27A1-205ENST00000485397 NEBP20929 6669 aa8.75□□□□□ -1.01
COL27A1-205ENST00000485397 FAM236AA0A1B0GUQ0 79 aa8.73□□□□□ -1.01
COL27A1-205ENST00000485397 FAM236BA0A1B0GV22 79 aa8.73□□□□□ -1.01
COL27A1-205ENST00000485397 A6NN06 94 aa8.72□□□□□ -1.01
COL27A1-205ENST00000485397 MT1BP07438 61 aa8.72□□□□□ -1.01
COL27A1-205ENST00000485397 UBL5Q9BZL1 73 aa8.71□□□□□ -1.02
COL27A1-205ENST00000485397 KRTAP3-1Q9BYR8 98 aa8.7□□□□□ -1.02
COL27A1-205ENST00000485397 CXCL6P80162 114 aa8.69□□□□□ -1.02
COL27A1-205ENST00000485397 ACYP1P07311 99 aa8.66□□□□□ -1.02
COL27A1-205ENST00000485397 Q5VV11 94 aa8.66□□□□□ -1.02
COL27A1-205ENST00000485397 S4R3F8 94 aa8.66□□□□□ -1.02
COL27A1-205ENST00000485397 MUC12Q9UKN1 5478 aa8.65□□□□□ -1.03
COL27A1-205ENST00000485397 KRTAP19-8Q3LI54 63 aa8.64□□□□□ -1.03
COL27A1-205ENST00000485397 CSAG1Q6PB30 78 aa8.63□□□□□ -1.03
COL27A1-205ENST00000485397 SPRR2GQ9BYE4 73 aa8.62□□□□□ -1.03
COL27A1-205ENST00000485397 FAM240AA0A1B0GVK7 77 aa8.61□□□□□ -1.03
COL27A1-205ENST00000485397 J3QR89 54 aa8.61□□□□□ -1.03
COL27A1-205ENST00000485397 C1orf64Q8NEQ6 169 aa8.61□□□□□ -1.03
COL27A1-205ENST00000485397 LCA10Q71F78 164 aa8.6□□□□□ -1.03
COL27A1-205ENST00000485397 KRTAP10-5P60370 271 aa8.56□□□□□ -1.04
COL27A1-205ENST00000485397 KLKP1Q107X0 134 aa8.51□□□□□ -1.05
COL27A1-205ENST00000485397 ATP5EP2Q5VTU8 51 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms