RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 HIST1H4AP62805 103 aaKnown RBP9.86□□□□□ -0.83
CCDC78-214ENST00000485091 A8MWP4 228 aa9.84□□□□□ -0.83
CCDC78-214ENST00000485091 NDUFB1O75438 58 aa9.82□□□□□ -0.84
CCDC78-214ENST00000485091 A0A087WVE0 104 aa9.81□□□□□ -0.84
CCDC78-214ENST00000485091 IGHV6-1A0A0B4J1U7 121 aa9.81□□□□□ -0.84
CCDC78-214ENST00000485091 PRR15Q8IV56 129 aa9.79□□□□□ -0.84
CCDC78-214ENST00000485091 A0A1B0GVX0 72 aa9.79□□□□□ -0.84
CCDC78-214ENST00000485091 IMUPQ9GZP8 106 aa9.75□□□□□ -0.85
CCDC78-214ENST00000485091 NOTCH2NLQ7Z3S9 236 aa9.74□□□□□ -0.85
CCDC78-214ENST00000485091 PRR4Q16378 134 aa9.73□□□□□ -0.85
CCDC78-214ENST00000485091 WFDC13Q8IUB5 93 aa9.72□□□□□ -0.85
CCDC78-214ENST00000485091 C8orf17Q9NRJ1 99 aa9.72□□□□□ -0.85
CCDC78-214ENST00000485091 IGLV7-46A0A075B6I9 117 aa9.7□□□□□ -0.86
CCDC78-214ENST00000485091 C9orf92A6NGG3 77 aa9.7□□□□□ -0.86
CCDC78-214ENST00000485091 FP248Q71RG6 208 aaPredicted RBP9.7□□□□□ -0.86
CCDC78-214ENST00000485091 MMP24-AS1A0A0U1RRL7 71 aa9.69□□□□□ -0.86
CCDC78-214ENST00000485091 HCG22E2RYF7 251 aa9.69□□□□□ -0.86
CCDC78-214ENST00000485091 LINC00313P59037 77 aa9.69□□□□□ -0.86
CCDC78-214ENST00000485091 C8orf87E5RJ46 101 aa9.67□□□□□ -0.86
CCDC78-214ENST00000485091 CASC2Q6XLA1 102 aa9.66□□□□□ -0.86
CCDC78-214ENST00000485091 FAM236AA0A1B0GUQ0 79 aa9.65□□□□□ -0.86
CCDC78-214ENST00000485091 FAM236BA0A1B0GV22 79 aa9.65□□□□□ -0.86
CCDC78-214ENST00000485091 hDV103S1A0JD37 113 aa9.65□□□□□ -0.86
CCDC78-214ENST00000485091 SCGB1A1P11684 91 aa9.59□□□□□ -0.87
CCDC78-214ENST00000485091 HMCN2Q8NDA2 5059 aa9.59□□□□□ -0.87
CCDC78-214ENST00000485091 MRPL34Q9BQ48 92 aaKnown RBP9.59□□□□□ -0.87
CCDC78-214ENST00000485091 KRTAP16-1A8MUX0 517 aa9.58□□□□□ -0.88
CCDC78-214ENST00000485091 TMEM254Q8TBM7 123 aa9.58□□□□□ -0.88
CCDC78-214ENST00000485091 KRTAP13-3Q3SY46 172 aa9.57□□□□□ -0.88
CCDC78-214ENST00000485091 NDUFS5O43920 106 aa9.56□□□□□ -0.88
CCDC78-214ENST00000485091 TPRXLQ17RH7 258 aa9.51□□□□□ -0.89
CCDC78-214ENST00000485091 LPAP08519 4548 aa9.49□□□□□ -0.89
CCDC78-214ENST00000485091 Q8N9P0 234 aaPredicted RBP9.49□□□□□ -0.89
CCDC78-214ENST00000485091 ATOX1O00244 68 aa9.48□□□□□ -0.89
CCDC78-214ENST00000485091 XP32Q5T750 250 aa9.48□□□□□ -0.89
CCDC78-214ENST00000485091 C20orf166-AS1Q96NR2 134 aa9.45□□□□□ -0.9
CCDC78-214ENST00000485091 OCR1Q9BZK8 76 aa9.45□□□□□ -0.9
CCDC78-214ENST00000485091 A8MUU9 505 aa9.44□□□□□ -0.9
CCDC78-214ENST00000485091 TP53AIP1Q9HCN2 124 aa9.41□□□□□ -0.9
CCDC78-214ENST00000485091 Q75L30 129 aa9.4□□□□□ -0.9
CCDC78-214ENST00000485091 ANAPC13Q9BS18 74 aa9.4□□□□□ -0.9
CCDC78-214ENST00000485091 TRAV7A0A075B6U4 112 aa9.39□□□□□ -0.91
CCDC78-214ENST00000485091 SMIM20Q8N5G0 67 aa9.39□□□□□ -0.91
CCDC78-214ENST00000485091 UBR4Q5T4S7 5183 aa9.38□□□□□ -0.91
CCDC78-214ENST00000485091 UQCRQO14949 82 aa9.38□□□□□ -0.91
CCDC78-214ENST00000485091 RPL37P61927 97 aaKnown RBP9.38□□□□□ -0.91
CCDC78-214ENST00000485091 Q5W150 140 aa9.37□□□□□ -0.91
CCDC78-214ENST00000485091 SERP2Q8N6R1 65 aa9.36□□□□□ -0.91
CCDC78-214ENST00000485091 ZCCHC13Q8WW36 166 aaKnown RBP9.34□□□□□ -0.91
CCDC78-214ENST00000485091 LRP2P98164 4655 aa9.34□□□□□ -0.92
CCDC78-214ENST00000485091 ATP11AUNQ6ZP68 121 aa9.34□□□□□ -0.92
CCDC78-214ENST00000485091 H0Y9P7 68 aa9.33□□□□□ -0.92
CCDC78-214ENST00000485091 TRAV22A0A0B4J277 110 aa9.32□□□□□ -0.92
CCDC78-214ENST00000485091 C5orf47Q569G3 176 aa9.3□□□□□ -0.92
CCDC78-214ENST00000485091 COX7CP15954 63 aa9.29□□□□□ -0.92
CCDC78-214ENST00000485091 MP68P56378 58 aa9.28□□□□□ -0.92
CCDC78-214ENST00000485091 PCOTHQ58A44 107 aa9.28□□□□□ -0.92
CCDC78-214ENST00000485091 LINC00208Q96KT6 92 aa9.26□□□□□ -0.93
CCDC78-214ENST00000485091 C20orf197Q8N268 126 aa9.25□□□□□ -0.93
CCDC78-214ENST00000485091 C1orf64Q8NEQ6 169 aa9.22□□□□□ -0.93
CCDC78-214ENST00000485091 SNURFQ9Y675 71 aa9.22□□□□□ -0.93
CCDC78-214ENST00000485091 IGKV2D-30A0A075B6S6 120 aa9.22□□□□□ -0.93
CCDC78-214ENST00000485091 CCDC179H3BU77 68 aa9.22□□□□□ -0.93
CCDC78-214ENST00000485091 IGKV2-30P06310 120 aa9.22□□□□□ -0.93
CCDC78-214ENST00000485091 PCP4P48539 62 aa9.21□□□□□ -0.94
CCDC78-214ENST00000485091 SEC61BP60468 96 aaKnown RBP9.21□□□□□ -0.94
CCDC78-214ENST00000485091 A0A0U1RQV1 116 aa9.19□□□□□ -0.94
CCDC78-214ENST00000485091 H3BPC8 53 aa9.17□□□□□ -0.94
CCDC78-214ENST00000485091 LOC101927531A0A1B0GV80 90 aa9.17□□□□□ -0.94
CCDC78-214ENST00000485091 MUC17Q685J3 4493 aa9.16□□□□□ -0.94
CCDC78-214ENST00000485091 SPINK7P58062 85 aa9.14□□□□□ -0.95
CCDC78-214ENST00000485091 RNF213Q63HN8 5207 aa9.14□□□□□ -0.95
CCDC78-214ENST00000485091 C7orf65Q6ZTY9 151 aa9.14□□□□□ -0.95
CCDC78-214ENST00000485091 CYP4F30PQ9H0H9 118 aa9.14□□□□□ -0.95
CCDC78-214ENST00000485091 KLKP1Q107X0 134 aa9.11□□□□□ -0.95
CCDC78-214ENST00000485091 CYSTM1Q9H1C7 97 aa9.1□□□□□ -0.95
CCDC78-214ENST00000485091 KRTAP4-1Q9BYQ7 146 aa9.05□□□□□ -0.96
CCDC78-214ENST00000485091 HRES1P13985 223 aa9□□□□□ -0.97
CCDC78-214ENST00000485091 H7BZZ5 65 aa8.99□□□□□ -0.97
CCDC78-214ENST00000485091 NDUFC1O43677 76 aa8.98□□□□□ -0.97
CCDC78-214ENST00000485091 C4orf26Q17RF5 130 aa8.98□□□□□ -0.97
CCDC78-214ENST00000485091 MUC2Q02817 5179 aa8.92□□□□□ -0.98
CCDC78-214ENST00000485091 RBM12B-AS1Q9P1G2 102 aa8.87□□□□□ -0.99
CCDC78-214ENST00000485091 SPANXA2-OT1Q8N9U9 137 aa8.86□□□□□ -0.99
CCDC78-214ENST00000485091 COX6B2Q6YFQ2 88 aa8.85□□□□□ -0.99
CCDC78-214ENST00000485091 MPLKIPQ8TAP9 179 aa8.85□□□□□ -0.99
CCDC78-214ENST00000485091 FAM236DA0A1B0GTK5 79 aa8.84□□□□□ -0.99
CCDC78-214ENST00000485091 FAM236CP0DP71 79 aa8.84□□□□□ -0.99
CCDC78-214ENST00000485091 KRTAP3-1Q9BYR8 98 aa8.83□□□□□ -1
CCDC78-214ENST00000485091 TMEM258P61165 79 aa8.83□□□□□ -1
CCDC78-214ENST00000485091 DMAC1Q96GE9 116 aa8.78□□□□□ -1
CCDC78-214ENST00000485091 A8MUN3 132 aa8.74□□□□□ -1.01
CCDC78-214ENST00000485091 ACYP2P14621 99 aa8.73□□□□□ -1.01
CCDC78-214ENST00000485091 ATP5EP56381 51 aaPredicted RBP8.73□□□□□ -1.01
CCDC78-214ENST00000485091 KRTAP19-2Q3LHN2 52 aa8.71□□□□□ -1.01
CCDC78-214ENST00000485091 H1FX-AS1Q4G0G2 97 aa8.71□□□□□ -1.02
CCDC78-214ENST00000485091 FAT4Q6V0I7 4981 aa8.65□□□□□ -1.02
CCDC78-214ENST00000485091 COA5Q86WW8 74 aa8.65□□□□□ -1.03
CCDC78-214ENST00000485091 CHKB-CPT1BH3BT56 60 aa8.63□□□□□ -1.03
CCDC78-214ENST00000485091 S4R3F8 94 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms