RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 A0A096LNI7 61 aa0.78□□□□□ -2.28
RC3H1-205ENST00000484867 DEFB109BQ30KR1 87 aa0.78□□□□□ -2.28
RC3H1-205ENST00000484867 ITPR1Q14643 2758 aa0.78□□□□□ -2.29
RC3H1-205ENST00000484867 CRYBG3Q68DQ2 2970 aa0.78□□□□□ -2.29
RC3H1-205ENST00000484867 CHD8Q9HCK8 2581 aa0.77□□□□□ -2.29
RC3H1-205ENST00000484867 VWFP04275 2813 aa0.77□□□□□ -2.29
RC3H1-205ENST00000484867 TNRC18O15417 2968 aaPredicted RBP0.77□□□□□ -2.29
RC3H1-205ENST00000484867 COX14Q96I36 57 aa0.77□□□□□ -2.29
RC3H1-205ENST00000484867 RHPN1-AS1Q9BWJ2 59 aa0.76□□□□□ -2.29
RC3H1-205ENST00000484867 CHD9Q3L8U1 2897 aa0.76□□□□□ -2.29
RC3H1-205ENST00000484867 USP9YO00507 2555 aaPredicted RBP0.76□□□□□ -2.29
RC3H1-205ENST00000484867 EPG5Q9HCE0 2579 aa0.76□□□□□ -2.29
RC3H1-205ENST00000484867 LRRK2Q5S007 2527 aa0.76□□□□□ -2.29
RC3H1-205ENST00000484867 PTPN13Q12923 2485 aa0.76□□□□□ -2.29
RC3H1-205ENST00000484867 CEP350Q5VT06 3117 aa0.75□□□□□ -2.29
RC3H1-205ENST00000484867 H3BUA1 57 aa0.75□□□□□ -2.29
RC3H1-205ENST00000484867 SPTAN1Q13813 2472 aaKnown RBP0.75□□□□□ -2.29
RC3H1-205ENST00000484867 SONP18583 2426 aaKnown RBP0.75□□□□□ -2.29
RC3H1-205ENST00000484867 FAM186AA6NE01 2351 aa0.75□□□□□ -2.29
RC3H1-205ENST00000484867 ZFYVE26Q68DK2 2539 aa0.74□□□□□ -2.29
RC3H1-205ENST00000484867 CELSR1Q9NYQ6 3014 aa0.74□□□□□ -2.29
RC3H1-205ENST00000484867 DCHS2Q6V1P9 2916 aa0.74□□□□□ -2.29
RC3H1-205ENST00000484867 NBEAL2Q6ZNJ1 2754 aa0.74□□□□□ -2.29
RC3H1-205ENST00000484867 A0A0C4DFX4 3053 aa0.74□□□□□ -2.29
RC3H1-205ENST00000484867 PRUNE2Q8WUY3 3088 aa0.74□□□□□ -2.29
RC3H1-205ENST00000484867 PDZD2O15018 2839 aa0.74□□□□□ -2.29
RC3H1-205ENST00000484867 NCOR2Q9Y618 2525 aa0.73□□□□□ -2.29
RC3H1-205ENST00000484867 LRBAP50851 2863 aa0.73□□□□□ -2.29
RC3H1-205ENST00000484867 DOPEY1Q5JWR5 2465 aa0.73□□□□□ -2.29
RC3H1-205ENST00000484867 A0A096LPF7 62 aa0.73□□□□□ -2.29
RC3H1-205ENST00000484867 SPINK6Q6UWN8 80 aa0.73□□□□□ -2.29
RC3H1-205ENST00000484867 NF1P21359 2839 aa0.73□□□□□ -2.29
RC3H1-205ENST00000484867 FLNCQ14315 2725 aa0.73□□□□□ -2.29
RC3H1-205ENST00000484867 SETXQ7Z333 2677 aaKnown RBP0.72□□□□□ -2.29
RC3H1-205ENST00000484867 USP24Q9UPU5 2620 aa0.72□□□□□ -2.29
RC3H1-205ENST00000484867 NOP10Q9NPE3 64 aaKnown RBP0.72□□□□□ -2.29
RC3H1-205ENST00000484867 GCN1Q92616 2671 aaKnown RBP0.72□□□□□ -2.29
RC3H1-205ENST00000484867 UNC79Q9P2D8 2635 aa0.72□□□□□ -2.29
RC3H1-205ENST00000484867 MEGF8Q7Z7M0 2845 aa0.72□□□□□ -2.29
RC3H1-205ENST00000484867 COL6A3P12111 3177 aa0.71□□□□□ -2.3
RC3H1-205ENST00000484867 FRYQ5TBA9 3013 aa0.71□□□□□ -2.3
RC3H1-205ENST00000484867 NBEAQ8NFP9 2946 aa0.71□□□□□ -2.3
RC3H1-205ENST00000484867 ITPR3Q14573 2671 aa0.71□□□□□ -2.3
RC3H1-205ENST00000484867 UTP20O75691 2785 aaKnown RBP0.71□□□□□ -2.3
RC3H1-205ENST00000484867 FBN2P35556 2912 aa0.71□□□□□ -2.3
RC3H1-205ENST00000484867 PCNTO95613 3336 aa0.71□□□□□ -2.3
RC3H1-205ENST00000484867 C5orf42Q9H799 3197 aa0.7□□□□□ -2.3
RC3H1-205ENST00000484867 CACNA1AO00555 2505 aa0.7□□□□□ -2.3
RC3H1-205ENST00000484867 ACACBO00763 2458 aa0.7□□□□□ -2.3
RC3H1-205ENST00000484867 MAP1AP78559 2803 aaPredicted RBP0.7□□□□□ -2.3
RC3H1-205ENST00000484867 TEX15Q9BXT5 2789 aa0.69□□□□□ -2.3
RC3H1-205ENST00000484867 USP9XQ93008 2570 aaPredicted RBP0.69□□□□□ -2.3
RC3H1-205ENST00000484867 CFAP46Q8IYW2 2715 aa0.69□□□□□ -2.3
RC3H1-205ENST00000484867 DNAH12Q6ZR08 3092 aa0.69□□□□□ -2.3
RC3H1-205ENST00000484867 CFAP54Q96N23 3096 aa0.69□□□□□ -2.3
RC3H1-205ENST00000484867 FRYLO94915 3013 aa0.69□□□□□ -2.3
RC3H1-205ENST00000484867 SMR3AQ99954 134 aa0.69□□□□□ -2.3
RC3H1-205ENST00000484867 ACANP16112 2415 aa0.69□□□□□ -2.3
RC3H1-205ENST00000484867 ZNF469Q96JG9 3925 aaPredicted RBP0.69□□□□□ -2.3
RC3H1-205ENST00000484867 MYO18BQ8IUG5 2567 aa0.69□□□□□ -2.3
RC3H1-205ENST00000484867 ANKRD11Q6UB99 2663 aaPredicted RBP0.69□□□□□ -2.3
RC3H1-205ENST00000484867 ZANQ9Y493 2812 aa0.69□□□□□ -2.3
RC3H1-205ENST00000484867 ZFHX4Q86UP3 3567 aa0.68□□□□□ -2.3
RC3H1-205ENST00000484867 COL12A1Q99715 3063 aa0.68□□□□□ -2.3
RC3H1-205ENST00000484867 LYSTQ99698 3801 aa0.68□□□□□ -2.3
RC3H1-205ENST00000484867 UTRNP46939 3433 aa0.68□□□□□ -2.3
RC3H1-205ENST00000484867 ANKHD1Q8IWZ3 2542 aaKnown RBP0.68□□□□□ -2.3
RC3H1-205ENST00000484867 STAB1Q9NY15 2570 aa0.67□□□□□ -2.3
RC3H1-205ENST00000484867 APCP25054 2843 aa0.67□□□□□ -2.3
RC3H1-205ENST00000484867 MXRA5Q9NR99 2828 aa0.67□□□□□ -2.3
RC3H1-205ENST00000484867 MTORP42345 2549 aa0.67□□□□□ -2.3
RC3H1-205ENST00000484867 CD52P31358 61 aa0.67□□□□□ -2.3
RC3H1-205ENST00000484867 KRTAP19-3Q7Z4W3 81 aa0.67□□□□□ -2.3
RC3H1-205ENST00000484867 FASNP49327 2511 aaKnown RBP0.67□□□□□ -2.3
RC3H1-205ENST00000484867 HTTP42858 3142 aa0.67□□□□□ -2.3
RC3H1-205ENST00000484867 NBEAL1Q6ZS30 2694 aa0.66□□□□□ -2.3
RC3H1-205ENST00000484867 KALRNO60229 2985 aa0.66□□□□□ -2.3
RC3H1-205ENST00000484867 KRTAP2-3P0C7H8 128 aa0.66□□□□□ -2.3
RC3H1-205ENST00000484867 KRTAP2-4Q9BYR9 128 aa0.66□□□□□ -2.3
RC3H1-205ENST00000484867 KRTAP2-1Q9BYU5 128 aa0.66□□□□□ -2.3
RC3H1-205ENST00000484867 ATMQ13315 3056 aa0.66□□□□□ -2.3
RC3H1-205ENST00000484867 NOTCH1P46531 2555 aa0.66□□□□□ -2.3
RC3H1-205ENST00000484867 TACC2O95359 2948 aa0.66□□□□□ -2.3
RC3H1-205ENST00000484867 HIVEP1P15822 2718 aa0.66□□□□□ -2.3
RC3H1-205ENST00000484867 PKD1L1Q8TDX9 2849 aa0.65□□□□□ -2.3
RC3H1-205ENST00000484867 MKI67P46013 3256 aaKnown RBP0.65□□□□□ -2.3
RC3H1-205ENST00000484867 DMXL1Q9Y485 3027 aa0.65□□□□□ -2.3
RC3H1-205ENST00000484867 MAST4O15021 2626 aa0.65□□□□□ -2.31
RC3H1-205ENST00000484867 ITPR2Q14571 2701 aa0.65□□□□□ -2.31
RC3H1-205ENST00000484867 CSMD3Q7Z407 3707 aa0.65□□□□□ -2.31
RC3H1-205ENST00000484867 BSNQ9UPA5 3926 aa0.65□□□□□ -2.31
RC3H1-205ENST00000484867 ZZEF1O43149 2961 aa0.65□□□□□ -2.31
RC3H1-205ENST00000484867 VPS13DQ5THJ4 4388 aa0.65□□□□□ -2.31
RC3H1-205ENST00000484867 FRAS1Q86XX4 4008 aa0.65□□□□□ -2.31
RC3H1-205ENST00000484867 TEP1Q99973 2627 aaKnown RBP0.65□□□□□ -2.31
RC3H1-205ENST00000484867 COL7A1Q02388 2944 aa0.65□□□□□ -2.31
RC3H1-205ENST00000484867 RANBP2P49792 3224 aaKnown RBP0.64□□□□□ -2.31
RC3H1-205ENST00000484867 DNAH11Q96DT5 4516 aa0.64□□□□□ -2.31
RC3H1-205ENST00000484867 TLN1Q9Y490 2541 aaKnown RBP0.64□□□□□ -2.31
RC3H1-205ENST00000484867 TLN2Q9Y4G6 2542 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms