RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 ASB16-AS1Q495Z4 193 aa8.95□□□□□ -0.98
RXRA-203ENST00000484822 A6NN06 94 aa8.95□□□□□ -0.98
RXRA-203ENST00000484822 KRTAP4-16G5E9R7 235 aaPredicted RBP8.95□□□□□ -0.98
RXRA-203ENST00000484822 HIVEP1P15822 2718 aa8.95□□□□□ -0.98
RXRA-203ENST00000484822 CELSR2Q9HCU4 2923 aa8.93□□□□□ -0.98
RXRA-203ENST00000484822 A8MU10 97 aa8.92□□□□□ -0.98
RXRA-203ENST00000484822 ADM2Q7Z4H4 148 aa8.89□□□□□ -0.99
RXRA-203ENST00000484822 KMT2BQ9UMN6 2715 aaPredicted RBP8.89□□□□□ -0.99
RXRA-203ENST00000484822 APCP25054 2843 aa8.89□□□□□ -0.99
RXRA-203ENST00000484822 WDFY3Q8IZQ1 3526 aa8.89□□□□□ -0.99
RXRA-203ENST00000484822 KRTAP10-1P60331 282 aa8.88□□□□□ -0.99
RXRA-203ENST00000484822 CRYBG3Q68DQ2 2970 aa8.88□□□□□ -0.99
RXRA-203ENST00000484822 A0A087X002 238 aa8.87□□□□□ -0.99
RXRA-203ENST00000484822 NOTCH2NLQ7Z3S9 236 aa8.87□□□□□ -0.99
RXRA-203ENST00000484822 MUC3AQ02505 3323 aa8.87□□□□□ -0.99
RXRA-203ENST00000484822 NF1P21359 2839 aa8.86□□□□□ -0.99
RXRA-203ENST00000484822 KRTAP10-2P60368 255 aa8.86□□□□□ -0.99
RXRA-203ENST00000484822 KRTAP16-1A8MUX0 517 aa8.83□□□□□ -1
RXRA-203ENST00000484822 PANO1I0J062 215 aa8.83□□□□□ -1
RXRA-203ENST00000484822 HRNRQ86YZ3 2850 aaPredicted RBP8.81□□□□□ -1
RXRA-203ENST00000484822 M0QZ58 72 aa8.81□□□□□ -1
RXRA-203ENST00000484822 KRTAP25-1Q3LHN0 102 aa8.8□□□□□ -1
RXRA-203ENST00000484822 FBN2P35556 2912 aa8.79□□□□□ -1
RXRA-203ENST00000484822 DCHS1Q96JQ0 3298 aa8.79□□□□□ -1
RXRA-203ENST00000484822 DCHS2Q6V1P9 2916 aa8.79□□□□□ -1
RXRA-203ENST00000484822 RELNP78509 3460 aa8.78□□□□□ -1
RXRA-203ENST00000484822 NIPBLQ6KC79 2804 aaeCLIP8.76□□□□□ -1.01
RXRA-203ENST00000484822 ASPMQ8IZT6 3477 aa8.76□□□□□ -1.01
RXRA-203ENST00000484822 LAMA5O15230 3695 aa8.73□□□□□ -1.01
RXRA-203ENST00000484822 Q6ZRN7 208 aaPredicted RBP8.71□□□□□ -1.01
RXRA-203ENST00000484822 NDUFAF8A1L188 74 aa8.7□□□□□ -1.02
RXRA-203ENST00000484822 KRTAP11-1Q8IUC1 163 aa8.69□□□□□ -1.02
RXRA-203ENST00000484822 TENM4Q6N022 2769 aa8.65□□□□□ -1.03
RXRA-203ENST00000484822 RPS29P62273 56 aaKnown RBP8.64□□□□□ -1.03
RXRA-203ENST00000484822 PLAC4Q8WY50 150 aa8.64□□□□□ -1.03
RXRA-203ENST00000484822 DMDP11532 3685 aa8.64□□□□□ -1.03
RXRA-203ENST00000484822 KRTAP7-1Q8IUC3 87 aa8.63□□□□□ -1.03
RXRA-203ENST00000484822 MXRA5Q9NR99 2828 aa8.59□□□□□ -1.03
RXRA-203ENST00000484822 ZFHX4Q86UP3 3567 aa8.59□□□□□ -1.03
RXRA-203ENST00000484822 A8MUU9 505 aa8.48□□□□□ -1.05
RXRA-203ENST00000484822 KRTAP13-1Q8IUC0 172 aa8.44□□□□□ -1.06
RXRA-203ENST00000484822 C20orf166-AS1Q96NR2 134 aa8.44□□□□□ -1.06
RXRA-203ENST00000484822 KRTAP13-2Q52LG2 175 aa8.42□□□□□ -1.06
RXRA-203ENST00000484822 CELSR1Q9NYQ6 3014 aa8.36□□□□□ -1.07
RXRA-203ENST00000484822 C10orf95Q9H7T3 257 aa8.3□□□□□ -1.08
RXRA-203ENST00000484822 SMG1Q96Q15 3661 aaKnown RBP8.3□□□□□ -1.08
RXRA-203ENST00000484822 CSMD1Q96PZ7 3565 aa8.27□□□□□ -1.09
RXRA-203ENST00000484822 TENM1Q9UKZ4 2725 aa8.23□□□□□ -1.09
RXRA-203ENST00000484822 TENM3Q9P273 2699 aa8.23□□□□□ -1.09
RXRA-203ENST00000484822 FBN1P35555 2871 aaKnown RBP8.19□□□□□ -1.1
RXRA-203ENST00000484822 H0YAA0 97 aa8.18□□□□□ -1.1
RXRA-203ENST00000484822 SVEP1Q4LDE5 3571 aa8.17□□□□□ -1.1
RXRA-203ENST00000484822 TNP1P09430 55 aa8.17□□□□□ -1.1
RXRA-203ENST00000484822 PDZD2O15018 2839 aa8.16□□□□□ -1.1
RXRA-203ENST00000484822 CUBNO60494 3623 aa8.16□□□□□ -1.1
RXRA-203ENST00000484822 PKD1L1Q8TDX9 2849 aa8.16□□□□□ -1.1
RXRA-203ENST00000484822 VWFP04275 2813 aa8.13□□□□□ -1.11
RXRA-203ENST00000484822 OTOGQ6ZRI0 2925 aa8.12□□□□□ -1.11
RXRA-203ENST00000484822 P0C880 135 aa8.07□□□□□ -1.12
RXRA-203ENST00000484822 KRTAP1-4P0C5Y4 121 aa8.06□□□□□ -1.12
RXRA-203ENST00000484822 NBPF19A0A087WUL8 3843 aa8.04□□□□□ -1.12
RXRA-203ENST00000484822 ZFHX3Q15911 3703 aa8.04□□□□□ -1.12
RXRA-203ENST00000484822 TENM2Q9NT68 2774 aa8.01□□□□□ -1.13
RXRA-203ENST00000484822 CSMD2Q7Z408 3487 aa8□□□□□ -1.13
RXRA-203ENST00000484822 PP632Q6XCG6 107 aa8□□□□□ -1.13
RXRA-203ENST00000484822 KRTAP10-8P60410 259 aa7.99□□□□□ -1.13
RXRA-203ENST00000484822 TPRXLQ17RH7 258 aa7.98□□□□□ -1.13
RXRA-203ENST00000484822 SPENQ96T58 3664 aaKnown RBP7.98□□□□□ -1.13
RXRA-203ENST00000484822 TGP01266 2768 aa7.95□□□□□ -1.14
RXRA-203ENST00000484822 XP32Q5T750 250 aa7.89□□□□□ -1.15
RXRA-203ENST00000484822 A0A1B0GVY2 172 aa7.85□□□□□ -1.15
RXRA-203ENST00000484822 PRO2289Q9P1D8 64 aa7.82□□□□□ -1.16
RXRA-203ENST00000484822 KRTAP10-10P60014 251 aa7.75□□□□□ -1.17
RXRA-203ENST00000484822 KRTAP13-3Q3SY46 172 aa7.73□□□□□ -1.17
RXRA-203ENST00000484822 SRRM2Q9UQ35 2752 aaKnown RBP7.73□□□□□ -1.17
RXRA-203ENST00000484822 BSNQ9UPA5 3926 aa7.73□□□□□ -1.17
RXRA-203ENST00000484822 ANK3Q12955 4377 aaKnown RBP7.64□□□□□ -1.19
RXRA-203ENST00000484822 TRRAPQ9Y4A5 3859 aa7.64□□□□□ -1.19
RXRA-203ENST00000484822 KRTAP12-2P59991 146 aa7.62□□□□□ -1.19
RXRA-203ENST00000484822 FBN3Q75N90 2809 aa7.53□□□□□ -1.2
RXRA-203ENST00000484822 KRTAP12-1P59990 96 aa7.46□□□□□ -1.22
RXRA-203ENST00000484822 VPS13CQ709C8 3753 aa7.4□□□□□ -1.23
RXRA-203ENST00000484822 KRTAP13-4Q3LI77 160 aa7.39□□□□□ -1.23
RXRA-203ENST00000484822 COL7A1Q02388 2944 aa7.38□□□□□ -1.23
RXRA-203ENST00000484822 KRTAP3-1Q9BYR8 98 aa7.38□□□□□ -1.23
RXRA-203ENST00000484822 MEGF8Q7Z7M0 2845 aa7.35□□□□□ -1.23
RXRA-203ENST00000484822 ZNF469Q96JG9 3925 aaPredicted RBP7.26□□□□□ -1.25
RXRA-203ENST00000484822 KRTAP10-6P60371 365 aaPredicted RBP7.23□□□□□ -1.25
RXRA-203ENST00000484822 MT1HL1P0DM35 61 aa7.14□□□□□ -1.27
RXRA-203ENST00000484822 KRTAP15-1Q3LI76 137 aa7.13□□□□□ -1.27
RXRA-203ENST00000484822 HUWE1Q7Z6Z7 4374 aaKnown RBP7.11□□□□□ -1.27
RXRA-203ENST00000484822 KRTAP10-4P60372 401 aaPredicted RBP7.08□□□□□ -1.28
RXRA-203ENST00000484822 CSMD3Q7Z407 3707 aa7.03□□□□□ -1.28
RXRA-203ENST00000484822 KRTAP4-5Q9BYR2 181 aa6.93□□□□□ -1.3
RXRA-203ENST00000484822 KRTAP3-2Q9BYR7 98 aa6.93□□□□□ -1.3
RXRA-203ENST00000484822 ALMS1Q8TCU4 4167 aa6.91□□□□□ -1.3
RXRA-203ENST00000484822 INE1O15225 51 aa6.9□□□□□ -1.3
RXRA-203ENST00000484822 AKAP9Q99996 3911 aa6.89□□□□□ -1.31
RXRA-203ENST00000484822 KRTAP3-3Q9BYR6 98 aa6.87□□□□□ -1.31
RXRA-203ENST00000484822 DNAH9Q9NYC9 4486 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms