RNA–Protein interactions for RNA: ENST00000484298.5

ALMS1-204, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-204ENST00000484298 CRYBG3Q68DQ2 2970 aa5.08□□□□□ -1.6
ALMS1-204ENST00000484298 COL12A1Q99715 3063 aa5.07□□□□□ -1.6
ALMS1-204ENST00000484298 INE1O15225 51 aa5.05□□□□□ -1.6
ALMS1-204ENST00000484298 PRUNE2Q8WUY3 3088 aa5.04□□□□□ -1.6
ALMS1-204ENST00000484298 GOLGB1Q14789 3259 aaKnown RBP5.04□□□□□ -1.6
ALMS1-204ENST00000484298 TNRC18O15417 2968 aaPredicted RBP5.01□□□□□ -1.61
ALMS1-204ENST00000484298 DMXL2Q8TDJ6 3036 aa5□□□□□ -1.61
ALMS1-204ENST00000484298 FREM2Q5SZK8 3169 aa4.98□□□□□ -1.61
ALMS1-204ENST00000484298 KRTAP10-10P60014 251 aa4.98□□□□□ -1.61
ALMS1-204ENST00000484298 ZANQ9Y493 2812 aa4.97□□□□□ -1.61
ALMS1-204ENST00000484298 UTRNP46939 3433 aa4.95□□□□□ -1.62
ALMS1-204ENST00000484298 TENM2Q9NT68 2774 aa4.95□□□□□ -1.62
ALMS1-204ENST00000484298 XP32Q5T750 250 aa4.95□□□□□ -1.62
ALMS1-204ENST00000484298 KRTAP13-4Q3LI77 160 aa4.94□□□□□ -1.62
ALMS1-204ENST00000484298 KRTAP12-2P59991 146 aa4.94□□□□□ -1.62
ALMS1-204ENST00000484298 VWFP04275 2813 aa4.94□□□□□ -1.62
ALMS1-204ENST00000484298 KRTAP7-1Q8IUC3 87 aa4.93□□□□□ -1.62
ALMS1-204ENST00000484298 TENM4Q6N022 2769 aa4.93□□□□□ -1.62
ALMS1-204ENST00000484298 DCHS2Q6V1P9 2916 aa4.92□□□□□ -1.62
ALMS1-204ENST00000484298 VPS13AQ96RL7 3174 aa4.91□□□□□ -1.62
ALMS1-204ENST00000484298 TPRXLQ17RH7 258 aa4.91□□□□□ -1.62
ALMS1-204ENST00000484298 TACC2O95359 2948 aa4.91□□□□□ -1.62
ALMS1-204ENST00000484298 WDFY4Q6ZS81 3184 aa4.9□□□□□ -1.62
ALMS1-204ENST00000484298 LAMA1P25391 3075 aa4.85□□□□□ -1.63
ALMS1-204ENST00000484298 PKD1L1Q8TDX9 2849 aa4.84□□□□□ -1.63
ALMS1-204ENST00000484298 NBEAQ8NFP9 2946 aa4.84□□□□□ -1.63
ALMS1-204ENST00000484298 ZZEF1O43149 2961 aa4.83□□□□□ -1.64
ALMS1-204ENST00000484298 CELSR1Q9NYQ6 3014 aa4.8□□□□□ -1.64
ALMS1-204ENST00000484298 REV3LO60673 3130 aa4.8□□□□□ -1.64
ALMS1-204ENST00000484298 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
ALMS1-204ENST00000484298 XIRP2A4UGR9 3374 aa4.76□□□□□ -1.65
ALMS1-204ENST00000484298 DMXL1Q9Y485 3027 aa4.75□□□□□ -1.65
ALMS1-204ENST00000484298 KRTAP1-4P0C5Y4 121 aa4.74□□□□□ -1.65
ALMS1-204ENST00000484298 COL7A1Q02388 2944 aa4.72□□□□□ -1.65
ALMS1-204ENST00000484298 MXRA5Q9NR99 2828 aa4.72□□□□□ -1.65
ALMS1-204ENST00000484298 KRTAP12-1P59990 96 aa4.71□□□□□ -1.66
ALMS1-204ENST00000484298 UNC80Q8N2C7 3258 aa4.7□□□□□ -1.66
ALMS1-204ENST00000484298 RANBP2P49792 3224 aaKnown RBP4.7□□□□□ -1.66
ALMS1-204ENST00000484298 KRTAP13-3Q3SY46 172 aa4.69□□□□□ -1.66
ALMS1-204ENST00000484298 ATMQ13315 3056 aa4.69□□□□□ -1.66
ALMS1-204ENST00000484298 FBN2P35556 2912 aa4.68□□□□□ -1.66
ALMS1-204ENST00000484298 ADGRG4Q8IZF6 3080 aa4.66□□□□□ -1.66
ALMS1-204ENST00000484298 BOD1L1Q8NFC6 3051 aa4.65□□□□□ -1.66
ALMS1-204ENST00000484298 CRCT1Q9UGL9 99 aa4.62□□□□□ -1.67
ALMS1-204ENST00000484298 HTTP42858 3142 aa4.6□□□□□ -1.67
ALMS1-204ENST00000484298 KRTAP23-1A1A580 65 aa4.58□□□□□ -1.68
ALMS1-204ENST00000484298 MEGF8Q7Z7M0 2845 aa4.57□□□□□ -1.68
ALMS1-204ENST00000484298 COL6A3P12111 3177 aa4.52□□□□□ -1.69
ALMS1-204ENST00000484298 CELSR3Q9NYQ7 3312 aa4.5□□□□□ -1.69
ALMS1-204ENST00000484298 USP34Q70CQ2 3546 aa4.48□□□□□ -1.69
ALMS1-204ENST00000484298 OTOGQ6ZRI0 2925 aa4.48□□□□□ -1.69
ALMS1-204ENST00000484298 HRNRQ86YZ3 2850 aaPredicted RBP4.48□□□□□ -1.69
ALMS1-204ENST00000484298 DNAH14Q0VDD8 3507 aa4.46□□□□□ -1.7
ALMS1-204ENST00000484298 KRTAP21-3Q3LHN1 58 aa4.44□□□□□ -1.7
ALMS1-204ENST00000484298 MKI67P46013 3256 aaKnown RBP4.44□□□□□ -1.7
ALMS1-204ENST00000484298 ZFHX3Q15911 3703 aa4.43□□□□□ -1.7
ALMS1-204ENST00000484298 KRTAP10-12P60413 245 aa4.43□□□□□ -1.7
ALMS1-204ENST00000484298 VCANP13611 3396 aa4.39□□□□□ -1.71
ALMS1-204ENST00000484298 FBN3Q75N90 2809 aa4.39□□□□□ -1.71
ALMS1-204ENST00000484298 CFAP47Q6ZTR5 3102 aa4.38□□□□□ -1.71
ALMS1-204ENST00000484298 KRTAP10-6P60371 365 aaPredicted RBP4.36□□□□□ -1.71
ALMS1-204ENST00000484298 ZFHX4Q86UP3 3567 aa4.34□□□□□ -1.71
ALMS1-204ENST00000484298 LAMA3Q16787 3333 aa4.32□□□□□ -1.72
ALMS1-204ENST00000484298 SPEGQ15772 3267 aa4.32□□□□□ -1.72
ALMS1-204ENST00000484298 SZT2Q5T011 3432 aa4.31□□□□□ -1.72
ALMS1-204ENST00000484298 KRTAP12-3P60328 96 aa4.3□□□□□ -1.72
ALMS1-204ENST00000484298 KRTAP3-1Q9BYR8 98 aa4.3□□□□□ -1.72
ALMS1-204ENST00000484298 FBN1P35555 2871 aaKnown RBP4.26□□□□□ -1.73
ALMS1-204ENST00000484298 SPTBN5Q9NRC6 3674 aaKnown RBP4.23□□□□□ -1.73
ALMS1-204ENST00000484298 MYO15AQ9UKN7 3530 aa4.21□□□□□ -1.74
ALMS1-204ENST00000484298 BRCA2P51587 3418 aa4.2□□□□□ -1.74
ALMS1-204ENST00000484298 KRTAP10-5P60370 271 aa4.2□□□□□ -1.74
ALMS1-204ENST00000484298 KRTAP3-2Q9BYR7 98 aa4.1□□□□□ -1.75
ALMS1-204ENST00000484298 LCE3AQ5TA76 89 aa4.07□□□□□ -1.76
ALMS1-204ENST00000484298 LOC400499M0QZD8 3231 aa4.07□□□□□ -1.76
ALMS1-204ENST00000484298 WDFY3Q8IZQ1 3526 aa4.07□□□□□ -1.76
ALMS1-204ENST00000484298 CDH23Q9H251 3354 aa4.05□□□□□ -1.76
ALMS1-204ENST00000484298 NBPF19A0A087WUL8 3843 aa4.04□□□□□ -1.76
ALMS1-204ENST00000484298 LORP23490 312 aaPredicted RBP4.04□□□□□ -1.76
ALMS1-204ENST00000484298 KRTAP3-3Q9BYR6 98 aa4.03□□□□□ -1.76
ALMS1-204ENST00000484298 EYSQ5T1H1 3165 aa4.02□□□□□ -1.77
ALMS1-204ENST00000484298 SMG1Q96Q15 3661 aaKnown RBP3.97□□□□□ -1.77
ALMS1-204ENST00000484298 KRTAP8-1Q8IUC2 63 aa3.96□□□□□ -1.78
ALMS1-204ENST00000484298 DCHS1Q96JQ0 3298 aa3.95□□□□□ -1.78
ALMS1-204ENST00000484298 SPENQ96T58 3664 aaKnown RBP3.94□□□□□ -1.78
ALMS1-204ENST00000484298 RELNP78509 3460 aa3.92□□□□□ -1.78
ALMS1-204ENST00000484298 DMDP11532 3685 aa3.92□□□□□ -1.78
ALMS1-204ENST00000484298 ASPMQ8IZT6 3477 aa3.9□□□□□ -1.79
ALMS1-204ENST00000484298 KRTAP19-4Q3LI73 84 aa3.84□□□□□ -1.8
ALMS1-204ENST00000484298 KRTAP4-5Q9BYR2 181 aa3.83□□□□□ -1.8
ALMS1-204ENST00000484298 LAMA5O15230 3695 aa3.83□□□□□ -1.8
ALMS1-204ENST00000484298 KRTAP10-7P60409 375 aaPredicted RBP3.8□□□□□ -1.8
ALMS1-204ENST00000484298 TRRAPQ9Y4A5 3859 aa3.77□□□□□ -1.81
ALMS1-204ENST00000484298 MT1HL1P0DM35 61 aa3.77□□□□□ -1.81
ALMS1-204ENST00000484298 LCE3CQ5T5A8 94 aa3.71□□□□□ -1.82
ALMS1-204ENST00000484298 CSMD1Q96PZ7 3565 aa3.71□□□□□ -1.82
ALMS1-204ENST00000484298 SPRR2FQ96RM1 72 aa3.7□□□□□ -1.82
ALMS1-204ENST00000484298 MT3P25713 68 aa3.7□□□□□ -1.82
ALMS1-204ENST00000484298 CSMD3Q7Z407 3707 aa3.68□□□□□ -1.82
ALMS1-204ENST00000484298 KRTAP10-4P60372 401 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms