RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 LIMD2Q9BT23 127 aa3.2□□□□□ -1.9
SEMA3D-204ENST00000484038 IGLV6-57P01721 117 aa3.19□□□□□ -1.9
SEMA3D-204ENST00000484038 FLGP20930 4061 aaPredicted RBP3.19□□□□□ -1.9
SEMA3D-204ENST00000484038 TRBV20-1A0A075B6N2 111 aa3.19□□□□□ -1.9
SEMA3D-204ENST00000484038 C9JAW5 83 aa3.19□□□□□ -1.9
SEMA3D-204ENST00000484038 IFITM1P13164 125 aa3.19□□□□□ -1.9
SEMA3D-204ENST00000484038 ST20-AS1Q8NBB2 130 aa3.19□□□□□ -1.9
SEMA3D-204ENST00000484038 S100A7L2Q5SY68 101 aa3.18□□□□□ -1.9
SEMA3D-204ENST00000484038 CLEC2BQ92478 149 aa3.18□□□□□ -1.9
SEMA3D-204ENST00000484038 TRAV23DV6A0A075B6W5 121 aa3.17□□□□□ -1.9
SEMA3D-204ENST00000484038 ATXN8Q156A1 80 aa3.17□□□□□ -1.9
SEMA3D-204ENST00000484038 ANKRD29Q8N6D5 301 aa3.17□□□□□ -1.9
SEMA3D-204ENST00000484038 TRBV10-2A0A0K0K1G8 114 aa3.16□□□□□ -1.9
SEMA3D-204ENST00000484038 RPL37P61927 97 aaKnown RBP3.16□□□□□ -1.9
SEMA3D-204ENST00000484038 Q6Q795 121 aa3.16□□□□□ -1.9
SEMA3D-204ENST00000484038 V9GYY9 64 aa3.16□□□□□ -1.9
SEMA3D-204ENST00000484038 USH2AO75445 5202 aa3.15□□□□□ -1.9
SEMA3D-204ENST00000484038 A8MU10 97 aa3.15□□□□□ -1.9
SEMA3D-204ENST00000484038 J3QR89 54 aa3.15□□□□□ -1.9
SEMA3D-204ENST00000484038 ZNF73O43830 326 aaPredicted RBP3.15□□□□□ -1.9
SEMA3D-204ENST00000484038 TEN1Q86WV5 123 aa3.15□□□□□ -1.9
SEMA3D-204ENST00000484038 PPDPFLQ8WWR9 84 aa3.15□□□□□ -1.9
SEMA3D-204ENST00000484038 LST1O00453 97 aa3.14□□□□□ -1.91
SEMA3D-204ENST00000484038 COX6CP09669 75 aa3.14□□□□□ -1.91
SEMA3D-204ENST00000484038 COPS9Q8WXC6 57 aa3.14□□□□□ -1.91
SEMA3D-204ENST00000484038 SMIM20Q8N5G0 67 aa3.14□□□□□ -1.91
SEMA3D-204ENST00000484038 LAMTOR3Q9UHA4 124 aa3.14□□□□□ -1.91
SEMA3D-204ENST00000484038 TRAV13-2A0A0B4J235 113 aa3.13□□□□□ -1.91
SEMA3D-204ENST00000484038 NDUFC2O95298 119 aa3.13□□□□□ -1.91
SEMA3D-204ENST00000484038 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
SEMA3D-204ENST00000484038 SMIM11BQ8TCY0 68 aa3.13□□□□□ -1.91
SEMA3D-204ENST00000484038 SIGMAR1Q99720 223 aa3.13□□□□□ -1.91
SEMA3D-204ENST00000484038 SSPOA2VEC9 5147 aa3.13□□□□□ -1.91
SEMA3D-204ENST00000484038 TEX49A0A1B0GTD5 131 aa3.12□□□□□ -1.91
SEMA3D-204ENST00000484038 H3BT86 120 aa3.12□□□□□ -1.91
SEMA3D-204ENST00000484038 SPRR1BP22528 89 aa3.12□□□□□ -1.91
SEMA3D-204ENST00000484038 CD164Q04900 197 aa3.12□□□□□ -1.91
SEMA3D-204ENST00000484038 C1orf195Q5TG92 126 aa3.12□□□□□ -1.91
SEMA3D-204ENST00000484038 DEFB105AQ8NG35 78 aa3.12□□□□□ -1.91
SEMA3D-204ENST00000484038 OR13C6PQ8NH95 151 aa3.12□□□□□ -1.91
SEMA3D-204ENST00000484038 SS18L2Q9UHA2 77 aa3.12□□□□□ -1.91
SEMA3D-204ENST00000484038 FCGBPQ9Y6R7 5405 aaPredicted RBP3.11□□□□□ -1.91
SEMA3D-204ENST00000484038 MT-ATP8P03928 68 aa3.11□□□□□ -1.91
SEMA3D-204ENST00000484038 DHRS4-AS1Q9P1J3 65 aa3.11□□□□□ -1.91
SEMA3D-204ENST00000484038 A0A0G2JQZ4 141 aa3.1□□□□□ -1.91
SEMA3D-204ENST00000484038 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
SEMA3D-204ENST00000484038 TRACP01848 142 aa3.09□□□□□ -1.91
SEMA3D-204ENST00000484038 BAALC-AS2P0C853 105 aa3.09□□□□□ -1.91
SEMA3D-204ENST00000484038 Q5XG85 94 aa3.09□□□□□ -1.91
SEMA3D-204ENST00000484038 MACF1Q9UPN3 7388 aaKnown RBP3.09□□□□□ -1.91
SEMA3D-204ENST00000484038 COX7BP24311 80 aa3.09□□□□□ -1.92
SEMA3D-204ENST00000484038 KRTAP12-2P59991 146 aa3.09□□□□□ -1.92
SEMA3D-204ENST00000484038 DNAL4O96015 105 aa3.08□□□□□ -1.92
SEMA3D-204ENST00000484038 ELOF1P60002 83 aaKnown RBP3.08□□□□□ -1.92
SEMA3D-204ENST00000484038 C6orf99Q4VX62 202 aa3.08□□□□□ -1.92
SEMA3D-204ENST00000484038 ATP11AUNQ6ZP68 121 aa3.08□□□□□ -1.92
SEMA3D-204ENST00000484038 H0YGX0 51 aa3.07□□□□□ -1.92
SEMA3D-204ENST00000484038 PRO0628Q9UI54 55 aa3.07□□□□□ -1.92
SEMA3D-204ENST00000484038 OBSCN-AS1Q96MR7 158 aa3.06□□□□□ -1.92
SEMA3D-204ENST00000484038 SNCGO76070 127 aa3.05□□□□□ -1.92
SEMA3D-204ENST00000484038 SYNE2Q8WXH0 6885 aaKnown RBP3.05□□□□□ -1.92
SEMA3D-204ENST00000484038 A0A1B0GX51 115 aa3.04□□□□□ -1.92
SEMA3D-204ENST00000484038 MT2AP02795 61 aa3.04□□□□□ -1.92
SEMA3D-204ENST00000484038 C14orf132Q9NPU4 83 aa3.04□□□□□ -1.92
SEMA3D-204ENST00000484038 ORMDL1Q9P0S3 153 aa3.04□□□□□ -1.92
SEMA3D-204ENST00000484038 IGLV5-48A0A075B6I7 105 aa3.03□□□□□ -1.92
SEMA3D-204ENST00000484038 FAM240AA0A1B0GVK7 77 aa3.03□□□□□ -1.92
SEMA3D-204ENST00000484038 RPS28P62857 69 aaKnown RBP3.03□□□□□ -1.92
SEMA3D-204ENST00000484038 F8WEM9 126 aa3.03□□□□□ -1.92
SEMA3D-204ENST00000484038 C4orf26Q17RF5 130 aa3.03□□□□□ -1.92
SEMA3D-204ENST00000484038 LINC00575Q6W349 94 aa3.03□□□□□ -1.92
SEMA3D-204ENST00000484038 hADV29S1A0JD25 119 aa3.02□□□□□ -1.93
SEMA3D-204ENST00000484038 MT1FP04733 61 aa3.02□□□□□ -1.93
SEMA3D-204ENST00000484038 ACYP1P07311 99 aa3.02□□□□□ -1.93
SEMA3D-204ENST00000484038 KRTAP10-10P60014 251 aa3.02□□□□□ -1.93
SEMA3D-204ENST00000484038 Q96NJ1 140 aa3.02□□□□□ -1.93
SEMA3D-204ENST00000484038 TRBV7-6A0A0J9YX20 115 aa3.01□□□□□ -1.93
SEMA3D-204ENST00000484038 FAM236DA0A1B0GTK5 79 aa3.01□□□□□ -1.93
SEMA3D-204ENST00000484038 J3KT08 172 aa3.01□□□□□ -1.93
SEMA3D-204ENST00000484038 FAM236CP0DP71 79 aa3.01□□□□□ -1.93
SEMA3D-204ENST00000484038 TRBV7-7A0A0K0K1E9 115 aa3□□□□□ -1.93
SEMA3D-204ENST00000484038 TMEM256-PLSCR3K7ERE1 68 aa3□□□□□ -1.93
SEMA3D-204ENST00000484038 Q6ZQY7 126 aa3□□□□□ -1.93
SEMA3D-204ENST00000484038 LINC00643Q86TS7 51 aa3□□□□□ -1.93
SEMA3D-204ENST00000484038 ANAPC13Q9BS18 74 aa3□□□□□ -1.93
SEMA3D-204ENST00000484038 LINC00846Q9NV44 126 aa3□□□□□ -1.93
SEMA3D-204ENST00000484038 IGKV3D-7A0A0C4DH55 119 aa2.99□□□□□ -1.93
SEMA3D-204ENST00000484038 JMJD7-PLA2G4BH0Y9G9 81 aa2.99□□□□□ -1.93
SEMA3D-204ENST00000484038 CCKP06307 115 aa2.99□□□□□ -1.93
SEMA3D-204ENST00000484038 IGFL1Q6UW32 110 aa2.99□□□□□ -1.93
SEMA3D-204ENST00000484038 C20orf166-AS1Q96NR2 134 aa2.99□□□□□ -1.93
SEMA3D-204ENST00000484038 FAM236AA0A1B0GUQ0 79 aa2.98□□□□□ -1.93
SEMA3D-204ENST00000484038 FAM236BA0A1B0GV22 79 aa2.98□□□□□ -1.93
SEMA3D-204ENST00000484038 Q6JHZ5 121 aa2.98□□□□□ -1.93
SEMA3D-204ENST00000484038 CCDC179H3BU77 68 aa2.97□□□□□ -1.93
SEMA3D-204ENST00000484038 RBM3P98179 157 aaKnown RBP2.97□□□□□ -1.93
SEMA3D-204ENST00000484038 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.97□□□□□ -1.93
SEMA3D-204ENST00000484038 Q6ZQT0 140 aa2.97□□□□□ -1.93
SEMA3D-204ENST00000484038 LOC110117498A0A087WWA1 95 aa2.96□□□□□ -1.94
SEMA3D-204ENST00000484038 A8MUU9 505 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms