RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 M0R2T5 61 aa6.17□□□□□ -1.42
HDLBP-239ENST00000483086 GHRHP01286 108 aa6.16□□□□□ -1.42
HDLBP-239ENST00000483086 CCKP06307 115 aa6.16□□□□□ -1.42
HDLBP-239ENST00000483086 IGKV4-1P06312 121 aa6.16□□□□□ -1.42
HDLBP-239ENST00000483086 USH2AO75445 5202 aa6.16□□□□□ -1.42
HDLBP-239ENST00000483086 TAX1BP3O14907 124 aa6.15□□□□□ -1.42
HDLBP-239ENST00000483086 TRACP01848 142 aa6.15□□□□□ -1.42
HDLBP-239ENST00000483086 COX6CP09669 75 aa6.15□□□□□ -1.42
HDLBP-239ENST00000483086 NAA38Q9BRA0 125 aaKnown RBP6.15□□□□□ -1.42
HDLBP-239ENST00000483086 SSPOA2VEC9 5147 aa6.14□□□□□ -1.43
HDLBP-239ENST00000483086 LINC00313P59037 77 aa6.13□□□□□ -1.43
HDLBP-239ENST00000483086 H3BQ85 93 aa6.12□□□□□ -1.43
HDLBP-239ENST00000483086 SCGB1C2P0DMR2 95 aa6.11□□□□□ -1.43
HDLBP-239ENST00000483086 K7EP34 96 aa6.1□□□□□ -1.43
HDLBP-239ENST00000483086 KRTAP9-8Q9BYQ0 159 aa6.1□□□□□ -1.43
HDLBP-239ENST00000483086 IGHV6-1A0A0B4J1U7 121 aa6.09□□□□□ -1.43
HDLBP-239ENST00000483086 C9orf118A6NHY6 69 aa6.09□□□□□ -1.43
HDLBP-239ENST00000483086 BAALC-AS2P0C853 105 aa6.09□□□□□ -1.43
HDLBP-239ENST00000483086 HRES1P13985 223 aa6.09□□□□□ -1.43
HDLBP-239ENST00000483086 RBM3P98179 157 aaKnown RBP6.09□□□□□ -1.43
HDLBP-239ENST00000483086 MPLKIPQ8TAP9 179 aa6.09□□□□□ -1.43
HDLBP-239ENST00000483086 A0A1B0GVX0 72 aa6.06□□□□□ -1.44
HDLBP-239ENST00000483086 Q6ZQT0 140 aa6.05□□□□□ -1.44
HDLBP-239ENST00000483086 DSCR8Q96T75 97 aa6.05□□□□□ -1.44
HDLBP-239ENST00000483086 C9JAW5 83 aa6.03□□□□□ -1.44
HDLBP-239ENST00000483086 F8W1H4 67 aa6.03□□□□□ -1.44
HDLBP-239ENST00000483086 ATXN8Q156A1 80 aa6.02□□□□□ -1.45
HDLBP-239ENST00000483086 SPCS1Q9Y6A9 102 aa6.02□□□□□ -1.45
HDLBP-239ENST00000483086 TRBV20-1A0A075B6N2 111 aa6.01□□□□□ -1.45
HDLBP-239ENST00000483086 A0A1W2PPM0 123 aa6.01□□□□□ -1.45
HDLBP-239ENST00000483086 LOC110117498A0A087WWA1 95 aa6□□□□□ -1.45
HDLBP-239ENST00000483086 C8orf87E5RJ46 101 aa6□□□□□ -1.45
HDLBP-239ENST00000483086 MT2AP02795 61 aa6□□□□□ -1.45
HDLBP-239ENST00000483086 C14orf132Q9NPU4 83 aa5.99□□□□□ -1.45
HDLBP-239ENST00000483086 IGKV3D-7A0A0C4DH55 119 aa5.98□□□□□ -1.45
HDLBP-239ENST00000483086 MT1FP04733 61 aa5.97□□□□□ -1.45
HDLBP-239ENST00000483086 Q8N9P0 234 aaPredicted RBP5.97□□□□□ -1.45
HDLBP-239ENST00000483086 ZCCHC13Q8WW36 166 aaKnown RBP5.97□□□□□ -1.45
HDLBP-239ENST00000483086 JMJD7-PLA2G4BH0Y9G9 81 aa5.96□□□□□ -1.46
HDLBP-239ENST00000483086 J3KT08 172 aa5.96□□□□□ -1.46
HDLBP-239ENST00000483086 C8orf17Q9NRJ1 99 aa5.96□□□□□ -1.46
HDLBP-239ENST00000483086 FAM236DA0A1B0GTK5 79 aa5.95□□□□□ -1.46
HDLBP-239ENST00000483086 FAM236CP0DP71 79 aa5.95□□□□□ -1.46
HDLBP-239ENST00000483086 ANAPC13Q9BS18 74 aa5.95□□□□□ -1.46
HDLBP-239ENST00000483086 A8MWP4 228 aa5.94□□□□□ -1.46
HDLBP-239ENST00000483086 SPINK7P58062 85 aa5.93□□□□□ -1.46
HDLBP-239ENST00000483086 C5orf47Q569G3 176 aa5.93□□□□□ -1.46
HDLBP-239ENST00000483086 FCGBPQ9Y6R7 5405 aaPredicted RBP5.92□□□□□ -1.46
HDLBP-239ENST00000483086 RBM12B-AS1Q9P1G2 102 aa5.92□□□□□ -1.46
HDLBP-239ENST00000483086 LYRM7Q5U5X0 104 aa5.91□□□□□ -1.46
HDLBP-239ENST00000483086 MMP24-AS1A0A0U1RRL7 71 aa5.9□□□□□ -1.46
HDLBP-239ENST00000483086 A0A1B0GW54 56 aa5.9□□□□□ -1.46
HDLBP-239ENST00000483086 KRTAP9-3Q9BYQ3 159 aa5.9□□□□□ -1.46
HDLBP-239ENST00000483086 NDUFB1O75438 58 aa5.89□□□□□ -1.47
HDLBP-239ENST00000483086 PDE6GP18545 87 aa5.89□□□□□ -1.47
HDLBP-239ENST00000483086 Q6ZVQ6 151 aa5.89□□□□□ -1.47
HDLBP-239ENST00000483086 PRR15Q8IV56 129 aa5.89□□□□□ -1.47
HDLBP-239ENST00000483086 K7EQZ3 153 aa5.87□□□□□ -1.47
HDLBP-239ENST00000483086 SMIM20Q8N5G0 67 aa5.87□□□□□ -1.47
HDLBP-239ENST00000483086 H3BT86 120 aa5.86□□□□□ -1.47
HDLBP-239ENST00000483086 NREPQ16612 68 aa5.86□□□□□ -1.47
HDLBP-239ENST00000483086 ETDBQ3ZM63 59 aa5.85□□□□□ -1.47
HDLBP-239ENST00000483086 WFDC13Q8IUB5 93 aa5.85□□□□□ -1.47
HDLBP-239ENST00000483086 KRTAP10-10P60014 251 aa5.83□□□□□ -1.48
HDLBP-239ENST00000483086 TMEM254Q8TBM7 123 aa5.83□□□□□ -1.48
HDLBP-239ENST00000483086 MRPL34Q9BQ48 92 aaKnown RBP5.83□□□□□ -1.48
HDLBP-239ENST00000483086 PRO0461Q9UI25 63 aa5.83□□□□□ -1.48
HDLBP-239ENST00000483086 MT-ATP8P03928 68 aa5.82□□□□□ -1.48
HDLBP-239ENST00000483086 Q5W150 140 aa5.82□□□□□ -1.48
HDLBP-239ENST00000483086 Q8N9L7 120 aa5.81□□□□□ -1.48
HDLBP-239ENST00000483086 hDV103S1A0JD37 113 aa5.8□□□□□ -1.48
HDLBP-239ENST00000483086 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.79□□□□□ -1.48
HDLBP-239ENST00000483086 KRTAP19-1Q8IUB9 90 aa5.78□□□□□ -1.48
HDLBP-239ENST00000483086 RPS28P62857 69 aaKnown RBP5.77□□□□□ -1.49
HDLBP-239ENST00000483086 BPY2O14599 106 aa5.76□□□□□ -1.49
HDLBP-239ENST00000483086 MACF1Q9UPN3 7388 aaKnown RBP5.75□□□□□ -1.49
HDLBP-239ENST00000483086 SYNE2Q8WXH0 6885 aaKnown RBP5.74□□□□□ -1.49
HDLBP-239ENST00000483086 CCDC179H3BU77 68 aa5.74□□□□□ -1.49
HDLBP-239ENST00000483086 NDUFS5O43920 106 aa5.74□□□□□ -1.49
HDLBP-239ENST00000483086 IMUPQ9GZP8 106 aa5.73□□□□□ -1.49
HDLBP-239ENST00000483086 LINC00846Q9NV44 126 aa5.73□□□□□ -1.49
HDLBP-239ENST00000483086 IGKV2D-30A0A075B6S6 120 aa5.72□□□□□ -1.49
HDLBP-239ENST00000483086 IGKV2-30P06310 120 aa5.72□□□□□ -1.49
HDLBP-239ENST00000483086 FAM240AA0A1B0GVK7 77 aa5.7□□□□□ -1.5
HDLBP-239ENST00000483086 KRTAP9-7A8MTY7 169 aa5.7□□□□□ -1.5
HDLBP-239ENST00000483086 HCG22E2RYF7 251 aa5.7□□□□□ -1.5
HDLBP-239ENST00000483086 H1FX-AS1Q4G0G2 97 aa5.7□□□□□ -1.5
HDLBP-239ENST00000483086 CASC2Q6XLA1 102 aa5.7□□□□□ -1.5
HDLBP-239ENST00000483086 UQCRQO14949 82 aa5.68□□□□□ -1.5
HDLBP-239ENST00000483086 ACYP1P07311 99 aa5.68□□□□□ -1.5
HDLBP-239ENST00000483086 C7orf65Q6ZTY9 151 aa5.67□□□□□ -1.5
HDLBP-239ENST00000483086 KRTAP3-1Q9BYR8 98 aa5.66□□□□□ -1.5
HDLBP-239ENST00000483086 C4orf26Q17RF5 130 aa5.65□□□□□ -1.5
HDLBP-239ENST00000483086 KRTAP19-6Q3LI70 58 aa5.65□□□□□ -1.5
HDLBP-239ENST00000483086 TMEM258P61165 79 aa5.62□□□□□ -1.51
HDLBP-239ENST00000483086 ATOX1O00244 68 aa5.6□□□□□ -1.51
HDLBP-239ENST00000483086 COX7CP15954 63 aa5.6□□□□□ -1.51
HDLBP-239ENST00000483086 CXCL6P80162 114 aa5.6□□□□□ -1.51
HDLBP-239ENST00000483086 UBL5Q9BZL1 73 aa5.6□□□□□ -1.51
HDLBP-239ENST00000483086 LINC00643Q86TS7 51 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms