RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-211ENST00000481154 OTOGQ6ZRI0 2925 aa0.79□□□□□ -2.28
PTPN12-211ENST00000481154 BDP1A6H8Y1 2624 aa0.79□□□□□ -2.28
PTPN12-211ENST00000481154 H3BNG1 76 aa0.79□□□□□ -2.28
PTPN12-211ENST00000481154 SMR3AQ99954 134 aa0.79□□□□□ -2.28
PTPN12-211ENST00000481154 DMBT1Q9UGM3 2413 aaPredicted RBP0.79□□□□□ -2.28
PTPN12-211ENST00000481154 NAV2Q8IVL1 2488 aa0.79□□□□□ -2.28
PTPN12-211ENST00000481154 CELSR1Q9NYQ6 3014 aa0.79□□□□□ -2.28
PTPN12-211ENST00000481154 A0A096LNI7 61 aa0.78□□□□□ -2.28
PTPN12-211ENST00000481154 NBASA2RRP1 2371 aa0.77□□□□□ -2.29
PTPN12-211ENST00000481154 AHNAKQ09666 5890 aaKnown RBP0.77□□□□□ -2.29
PTPN12-211ENST00000481154 APC2O95996 2303 aa0.77□□□□□ -2.29
PTPN12-211ENST00000481154 CSMD3Q7Z407 3707 aa0.77□□□□□ -2.29
PTPN12-211ENST00000481154 MGAQ8IWI9 3026 aa0.76□□□□□ -2.29
PTPN12-211ENST00000481154 STATHP02808 62 aa0.76□□□□□ -2.29
PTPN12-211ENST00000481154 DEFB1P60022 68 aa0.76□□□□□ -2.29
PTPN12-211ENST00000481154 DEFB110Q30KQ9 67 aa0.76□□□□□ -2.29
PTPN12-211ENST00000481154 Q9Y3F1 56 aa0.76□□□□□ -2.29
PTPN12-211ENST00000481154 TNRC18O15417 2968 aaPredicted RBP0.76□□□□□ -2.29
PTPN12-211ENST00000481154 SPTBN4Q9H254 2564 aa0.76□□□□□ -2.29
PTPN12-211ENST00000481154 KRTAP2-3P0C7H8 128 aa0.75□□□□□ -2.29
PTPN12-211ENST00000481154 KRTAP2-4Q9BYR9 128 aa0.75□□□□□ -2.29
PTPN12-211ENST00000481154 KRTAP2-1Q9BYU5 128 aa0.75□□□□□ -2.29
PTPN12-211ENST00000481154 CCDC168Q8NDH2 2452 aa0.75□□□□□ -2.29
PTPN12-211ENST00000481154 APCP25054 2843 aa0.74□□□□□ -2.29
PTPN12-211ENST00000481154 DEFB136Q30KP8 78 aa0.74□□□□□ -2.29
PTPN12-211ENST00000481154 COX14Q96I36 57 aa0.74□□□□□ -2.29
PTPN12-211ENST00000481154 USP24Q9UPU5 2620 aa0.73□□□□□ -2.29
PTPN12-211ENST00000481154 KRTAP19-3Q7Z4W3 81 aa0.73□□□□□ -2.29
PTPN12-211ENST00000481154 DEFB108BQ8NET1 73 aa0.73□□□□□ -2.29
PTPN12-211ENST00000481154 GPR98Q8WXG9 6306 aa0.73□□□□□ -2.29
PTPN12-211ENST00000481154 PIEZO1Q92508 2521 aa0.73□□□□□ -2.29
PTPN12-211ENST00000481154 NF1P21359 2839 aa0.73□□□□□ -2.29
PTPN12-211ENST00000481154 SETD2Q9BYW2 2564 aaPredicted RBP0.72□□□□□ -2.29
PTPN12-211ENST00000481154 HIVEP3Q5T1R4 2406 aa0.72□□□□□ -2.29
PTPN12-211ENST00000481154 DEFB124Q8NES8 71 aa0.72□□□□□ -2.29
PTPN12-211ENST00000481154 EPG5Q9HCE0 2579 aa0.72□□□□□ -2.29
PTPN12-211ENST00000481154 FLNCQ14315 2725 aa0.72□□□□□ -2.29
PTPN12-211ENST00000481154 MTORP42345 2549 aa0.71□□□□□ -2.3
PTPN12-211ENST00000481154 RIF1Q5UIP0 2472 aaKnown RBP0.71□□□□□ -2.3
PTPN12-211ENST00000481154 DCHS2Q6V1P9 2916 aa0.71□□□□□ -2.3
PTPN12-211ENST00000481154 FAM186AA6NE01 2351 aa0.71□□□□□ -2.3
PTPN12-211ENST00000481154 FRYQ5TBA9 3013 aa0.71□□□□□ -2.3
PTPN12-211ENST00000481154 CRYBG3Q68DQ2 2970 aa0.71□□□□□ -2.3
PTPN12-211ENST00000481154 ITPR3Q14573 2671 aa0.7□□□□□ -2.3
PTPN12-211ENST00000481154 PTPN13Q12923 2485 aa0.7□□□□□ -2.3
PTPN12-211ENST00000481154 PDZD2O15018 2839 aa0.7□□□□□ -2.3
PTPN12-211ENST00000481154 PKD1L1Q8TDX9 2849 aa0.7□□□□□ -2.3
PTPN12-211ENST00000481154 CEP250Q9BV73 2442 aa0.7□□□□□ -2.3
PTPN12-211ENST00000481154 BSNQ9UPA5 3926 aa0.7□□□□□ -2.3
PTPN12-211ENST00000481154 NCOR2Q9Y618 2525 aa0.7□□□□□ -2.3
PTPN12-211ENST00000481154 MAP1BP46821 2468 aaKnown RBP0.7□□□□□ -2.3
PTPN12-211ENST00000481154 UNC79Q9P2D8 2635 aa0.69□□□□□ -2.3
PTPN12-211ENST00000481154 SETXQ7Z333 2677 aaKnown RBP0.69□□□□□ -2.3
PTPN12-211ENST00000481154 GCN1Q92616 2671 aaKnown RBP0.69□□□□□ -2.3
PTPN12-211ENST00000481154 UTP20O75691 2785 aaKnown RBP0.68□□□□□ -2.3
PTPN12-211ENST00000481154 LYSTQ99698 3801 aa0.68□□□□□ -2.3
PTPN12-211ENST00000481154 LRRK2Q5S007 2527 aa0.68□□□□□ -2.3
PTPN12-211ENST00000481154 ZFHX4Q86UP3 3567 aa0.68□□□□□ -2.3
PTPN12-211ENST00000481154 PRM1P04553 51 aa0.68□□□□□ -2.3
PTPN12-211ENST00000481154 DEFB133Q30KQ1 61 aa0.68□□□□□ -2.3
PTPN12-211ENST00000481154 USP9YO00507 2555 aaPredicted RBP0.68□□□□□ -2.3
PTPN12-211ENST00000481154 VPS13DQ5THJ4 4388 aa0.67□□□□□ -2.3
PTPN12-211ENST00000481154 ANK2Q01484 3957 aa0.67□□□□□ -2.3
PTPN12-211ENST00000481154 KRTAP8-1Q8IUC2 63 aa0.67□□□□□ -2.3
PTPN12-211ENST00000481154 COL12A1Q99715 3063 aa0.67□□□□□ -2.3
PTPN12-211ENST00000481154 NBEAQ8NFP9 2946 aa0.67□□□□□ -2.3
PTPN12-211ENST00000481154 ACANP16112 2415 aa0.66□□□□□ -2.3
PTPN12-211ENST00000481154 CD52P31358 61 aa0.66□□□□□ -2.3
PTPN12-211ENST00000481154 DMXL1Q9Y485 3027 aa0.66□□□□□ -2.3
PTPN12-211ENST00000481154 ANKRD11Q6UB99 2663 aaPredicted RBP0.65□□□□□ -2.3
PTPN12-211ENST00000481154 SACSQ9NZJ4 4579 aa0.65□□□□□ -2.31
PTPN12-211ENST00000481154 ZZEF1O43149 2961 aa0.65□□□□□ -2.31
PTPN12-211ENST00000481154 A0A096LPF7 62 aa0.65□□□□□ -2.31
PTPN12-211ENST00000481154 SPENQ96T58 3664 aaKnown RBP0.65□□□□□ -2.31
PTPN12-211ENST00000481154 TACC2O95359 2948 aa0.65□□□□□ -2.31
PTPN12-211ENST00000481154 NSD1Q96L73 2696 aaPredicted RBP0.64□□□□□ -2.31
PTPN12-211ENST00000481154 FAT2Q9NYQ8 4349 aa0.64□□□□□ -2.31
PTPN12-211ENST00000481154 RPS29P62273 56 aaKnown RBP0.64□□□□□ -2.31
PTPN12-211ENST00000481154 LINC01556Q5JQF7 62 aa0.64□□□□□ -2.31
PTPN12-211ENST00000481154 DNAH11Q96DT5 4516 aa0.64□□□□□ -2.31
PTPN12-211ENST00000481154 NBEAL2Q6ZNJ1 2754 aa0.64□□□□□ -2.31
PTPN12-211ENST00000481154 FLNBO75369 2602 aaKnown RBP0.63□□□□□ -2.31
PTPN12-211ENST00000481154 ZFYVE26Q68DK2 2539 aa0.63□□□□□ -2.31
PTPN12-211ENST00000481154 PRKDCP78527 4128 aaKnown RBP0.62□□□□□ -2.31
PTPN12-211ENST00000481154 CFAP54Q96N23 3096 aa0.62□□□□□ -2.31
PTPN12-211ENST00000481154 WDR87Q6ZQQ6 2873 aa0.62□□□□□ -2.31
PTPN12-211ENST00000481154 MYCBP2O75592 4640 aa0.62□□□□□ -2.31
PTPN12-211ENST00000481154 CACNA1AO00555 2505 aa0.62□□□□□ -2.31
PTPN12-211ENST00000481154 COL7A1Q02388 2944 aa0.61□□□□□ -2.31
PTPN12-211ENST00000481154 CELSR3Q9NYQ7 3312 aa0.61□□□□□ -2.31
PTPN12-211ENST00000481154 KMT2AQ03164 3969 aa0.61□□□□□ -2.31
PTPN12-211ENST00000481154 ZANQ9Y493 2812 aa0.61□□□□□ -2.31
PTPN12-211ENST00000481154 VPS13BQ7Z7G8 4022 aa0.61□□□□□ -2.31
PTPN12-211ENST00000481154 ACACBO00763 2458 aa0.61□□□□□ -2.31
PTPN12-211ENST00000481154 ITPR1Q14643 2758 aa0.61□□□□□ -2.31
PTPN12-211ENST00000481154 SPG11Q96JI7 2443 aa0.6□□□□□ -2.31
PTPN12-211ENST00000481154 STAB1Q9NY15 2570 aa0.6□□□□□ -2.31
PTPN12-211ENST00000481154 DYNC2H1Q8NCM8 4307 aaKnown RBP0.6□□□□□ -2.31
PTPN12-211ENST00000481154 ANKHD1Q8IWZ3 2542 aaKnown RBP0.6□□□□□ -2.31
PTPN12-211ENST00000481154 MT1AP04731 61 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms