RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 GOLGB1Q14789 3259 aaKnown RBP0.67□□□□□ -2.3
CUL3-209ENST00000481135 TNP1P09430 55 aa0.67□□□□□ -2.3
CUL3-209ENST00000481135 CEP350Q5VT06 3117 aa0.67□□□□□ -2.3
CUL3-209ENST00000481135 CREBBPQ92793 2442 aa0.67□□□□□ -2.3
CUL3-209ENST00000481135 PKDREJQ9NTG1 2253 aa0.67□□□□□ -2.3
CUL3-209ENST00000481135 CELSR2Q9HCU4 2923 aa0.66□□□□□ -2.3
CUL3-209ENST00000481135 DNAH12Q6ZR08 3092 aa0.66□□□□□ -2.3
CUL3-209ENST00000481135 WDFY4Q6ZS81 3184 aa0.66□□□□□ -2.3
CUL3-209ENST00000481135 ZZEF1O43149 2961 aa0.66□□□□□ -2.3
CUL3-209ENST00000481135 COL6A3P12111 3177 aa0.65□□□□□ -2.3
CUL3-209ENST00000481135 APC2O95996 2303 aa0.65□□□□□ -2.3
CUL3-209ENST00000481135 UTRNP46939 3433 aa0.65□□□□□ -2.31
CUL3-209ENST00000481135 TNRC18O15417 2968 aaPredicted RBP0.65□□□□□ -2.31
CUL3-209ENST00000481135 AKAP6Q13023 2319 aa0.65□□□□□ -2.31
CUL3-209ENST00000481135 CSMD3Q7Z407 3707 aa0.65□□□□□ -2.31
CUL3-209ENST00000481135 VPS13AQ96RL7 3174 aa0.64□□□□□ -2.31
CUL3-209ENST00000481135 ANKHD1Q8IWZ3 2542 aaKnown RBP0.64□□□□□ -2.31
CUL3-209ENST00000481135 RANBP2P49792 3224 aaKnown RBP0.64□□□□□ -2.31
CUL3-209ENST00000481135 REV3LO60673 3130 aa0.64□□□□□ -2.31
CUL3-209ENST00000481135 PCNX1Q96RV3 2341 aa0.64□□□□□ -2.31
CUL3-209ENST00000481135 EP400Q96L91 3159 aa0.63□□□□□ -2.31
CUL3-209ENST00000481135 CNOT1A5YKK6 2376 aaKnown RBP0.63□□□□□ -2.31
CUL3-209ENST00000481135 MGAQ8IWI9 3026 aa0.63□□□□□ -2.31
CUL3-209ENST00000481135 DCHS1Q96JQ0 3298 aa0.63□□□□□ -2.31
CUL3-209ENST00000481135 ACACAQ13085 2346 aa0.63□□□□□ -2.31
CUL3-209ENST00000481135 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.63□□□□□ -2.312e-12■■■■■ 46.8
CUL3-209ENST00000481135 CSPG4Q6UVK1 2322 aa0.63□□□□□ -2.31
CUL3-209ENST00000481135 SZT2Q5T011 3432 aa0.63□□□□□ -2.31
CUL3-209ENST00000481135 TRIOO75962 3097 aa0.63□□□□□ -2.31
CUL3-209ENST00000481135 SPTA1P02549 2419 aa0.63□□□□□ -2.31
CUL3-209ENST00000481135 EP300Q09472 2414 aaPredicted RBP0.63□□□□□ -2.31
CUL3-209ENST00000481135 FRYLO94915 3013 aa0.62□□□□□ -2.31
CUL3-209ENST00000481135 SPTAN1Q13813 2472 aaKnown RBP0.62□□□□□ -2.31
CUL3-209ENST00000481135 UNC80Q8N2C7 3258 aa0.62□□□□□ -2.31
CUL3-209ENST00000481135 NBEAQ8NFP9 2946 aa0.61□□□□□ -2.31
CUL3-209ENST00000481135 AHNAKQ09666 5890 aaKnown RBP0.61□□□□□ -2.31
CUL3-209ENST00000481135 CFAP54Q96N23 3096 aa0.61□□□□□ -2.31
CUL3-209ENST00000481135 DNAH14Q0VDD8 3507 aa0.61□□□□□ -2.31
CUL3-209ENST00000481135 ALMS1Q8TCU4 4167 aa0.6□□□□□ -2.31
CUL3-209ENST00000481135 MKI67P46013 3256 aaKnown RBP0.6□□□□□ -2.31
CUL3-209ENST00000481135 CHD9Q3L8U1 2897 aa0.6□□□□□ -2.31
CUL3-209ENST00000481135 FRYQ5TBA9 3013 aa0.6□□□□□ -2.31
CUL3-209ENST00000481135 FREM2Q5SZK8 3169 aa0.6□□□□□ -2.31
CUL3-209ENST00000481135 NBASA2RRP1 2371 aa0.6□□□□□ -2.31
CUL3-209ENST00000481135 LAMA2P24043 3122 aaKnown RBP0.6□□□□□ -2.31
CUL3-209ENST00000481135 GVINP1Q7Z2Y8 2422 aa0.6□□□□□ -2.31
CUL3-209ENST00000481135 PRUNE2Q8WUY3 3088 aa0.6□□□□□ -2.31
CUL3-209ENST00000481135 XIRP2A4UGR9 3374 aa0.6□□□□□ -2.31
CUL3-209ENST00000481135 KALRNO60229 2985 aa0.6□□□□□ -2.31
CUL3-209ENST00000481135 LRP1Q07954 4544 aaKnown RBP0.59□□□□□ -2.31
CUL3-209ENST00000481135 ZNF292O60281 2723 aa0.59□□□□□ -2.31
CUL3-209ENST00000481135 SPG11Q96JI7 2443 aa0.59□□□□□ -2.31
CUL3-209ENST00000481135 CHD7Q9P2D1 2997 aa0.59□□□□□ -2.31
CUL3-209ENST00000481135 ZFYVE26Q68DK2 2539 aa0.59□□□□□ -2.31
CUL3-209ENST00000481135 NCOR2Q9Y618 2525 aa0.59□□□□□ -2.31
CUL3-209ENST00000481135 PRRC2CQ9Y520 2896 aaKnown RBP0.59□□□□□ -2.32
CUL3-209ENST00000481135 SPEGQ15772 3267 aa0.59□□□□□ -2.32
CUL3-209ENST00000481135 HTTP42858 3142 aa0.59□□□□□ -2.32
CUL3-209ENST00000481135 VCANP13611 3396 aa0.59□□□□□ -2.32
CUL3-209ENST00000481135 SONP18583 2426 aaKnown RBP0.58□□□□□ -2.32
CUL3-209ENST00000481135 HIVEP3Q5T1R4 2406 aa0.58□□□□□ -2.32
CUL3-209ENST00000481135 C5orf42Q9H799 3197 aa0.58□□□□□ -2.32
CUL3-209ENST00000481135 CEP290O15078 2479 aa0.58□□□□□ -2.32
CUL3-209ENST00000481135 M0R2T5 61 aa0.58□□□□□ -2.32
CUL3-209ENST00000481135 SMR3BP02814 79 aaPredicted RBP0.58□□□□□ -2.32
CUL3-209ENST00000481135 CFAP47Q6ZTR5 3102 aa0.58□□□□□ -2.32
CUL3-209ENST00000481135 MAP1AP78559 2803 aaPredicted RBP0.58□□□□□ -2.32
CUL3-209ENST00000481135 CELSR3Q9NYQ7 3312 aa0.58□□□□□ -2.32
CUL3-209ENST00000481135 USP34Q70CQ2 3546 aa0.58□□□□□ -2.32
CUL3-209ENST00000481135 DMXL2Q8TDJ6 3036 aa0.57□□□□□ -2.32
CUL3-209ENST00000481135 ADGRG4Q8IZF6 3080 aa0.57□□□□□ -2.32
CUL3-209ENST00000481135 WDFY3Q8IZQ1 3526 aa0.57□□□□□ -2.32
CUL3-209ENST00000481135 PIEZO2Q9H5I5 2752 aa0.57□□□□□ -2.32
CUL3-209ENST00000481135 LAMA1P25391 3075 aa0.57□□□□□ -2.32
CUL3-209ENST00000481135 COL12A1Q99715 3063 aa0.57□□□□□ -2.32
CUL3-209ENST00000481135 LAMA3Q16787 3333 aa0.57□□□□□ -2.32
CUL3-209ENST00000481135 BRCA2P51587 3418 aa0.57□□□□□ -2.32
CUL3-209ENST00000481135 MUC5BQ9HC84 5762 aaPredicted RBP0.57□□□□□ -2.32
CUL3-209ENST00000481135 DMXL1Q9Y485 3027 aa0.56□□□□□ -2.32
CUL3-209ENST00000481135 SPTBN4Q9H254 2564 aa0.56□□□□□ -2.32
CUL3-209ENST00000481135 DSPP15924 2871 aaKnown RBP0.56□□□□□ -2.32
CUL3-209ENST00000481135 IGF2RP11717 2491 aa0.56□□□□□ -2.32
CUL3-209ENST00000481135 ITPR1Q14643 2758 aa0.56□□□□□ -2.32
CUL3-209ENST00000481135 ABCA2Q9BZC7 2435 aa0.56□□□□□ -2.32
CUL3-209ENST00000481135 RIF1Q5UIP0 2472 aaKnown RBP0.56□□□□□ -2.32
CUL3-209ENST00000481135 ZFHX4Q86UP3 3567 aa0.56□□□□□ -2.32
CUL3-209ENST00000481135 CSMD1Q96PZ7 3565 aa0.56□□□□□ -2.32
CUL3-209ENST00000481135 MYO9AB2RTY4 2548 aa0.56□□□□□ -2.32
CUL3-209ENST00000481135 TLN1Q9Y490 2541 aaKnown RBP0.56□□□□□ -2.32
CUL3-209ENST00000481135 TRANK1O15050 2925 aa0.55□□□□□ -2.32
CUL3-209ENST00000481135 PKD1L2Q7Z442 2459 aa0.55□□□□□ -2.32
CUL3-209ENST00000481135 LRRK2Q5S007 2527 aa0.55□□□□□ -2.32
CUL3-209ENST00000481135 TACC2O95359 2948 aa0.55□□□□□ -2.32
CUL3-209ENST00000481135 CDH23Q9H251 3354 aa0.55□□□□□ -2.32
CUL3-209ENST00000481135 CHD6Q8TD26 2715 aa0.55□□□□□ -2.32
CUL3-209ENST00000481135 ACANP16112 2415 aa0.55□□□□□ -2.32
CUL3-209ENST00000481135 AKAP13Q12802 2813 aa0.55□□□□□ -2.32
CUL3-209ENST00000481135 DOPEY1Q5JWR5 2465 aa0.55□□□□□ -2.32
CUL3-209ENST00000481135 TLN2Q9Y4G6 2542 aa0.55□□□□□ -2.32
CUL3-209ENST00000481135 CELSR1Q9NYQ6 3014 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms