RNA–Protein interactions for RNA: ENST00000481098.1

GTF3C3-211, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-211ENST00000481098 LINC00304Q8N9R0 145 aa2.69□□□□□ -1.98
GTF3C3-211ENST00000481098 IGF2RP11717 2491 aa2.69□□□□□ -1.98
GTF3C3-211ENST00000481098 NAV2Q8IVL1 2488 aa2.69□□□□□ -1.98
GTF3C3-211ENST00000481098 IGLV7-43P04211 117 aa2.68□□□□□ -1.98
GTF3C3-211ENST00000481098 FN1P02751 2386 aaKnown RBP2.68□□□□□ -1.98
GTF3C3-211ENST00000481098 SETXQ7Z333 2677 aaKnown RBP2.68□□□□□ -1.98
GTF3C3-211ENST00000481098 SVEP1Q4LDE5 3571 aa2.68□□□□□ -1.98
GTF3C3-211ENST00000481098 CELSR1Q9NYQ6 3014 aa2.68□□□□□ -1.98
GTF3C3-211ENST00000481098 MUC6Q6W4X9 2439 aa2.67□□□□□ -1.98
GTF3C3-211ENST00000481098 CIRBP-AS1Q8TBR5 109 aa2.67□□□□□ -1.98
GTF3C3-211ENST00000481098 CHD6Q8TD26 2715 aa2.66□□□□□ -1.98
GTF3C3-211ENST00000481098 ZFYVE26Q68DK2 2539 aa2.66□□□□□ -1.98
GTF3C3-211ENST00000481098 ATMQ13315 3056 aa2.66□□□□□ -1.98
GTF3C3-211ENST00000481098 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
GTF3C3-211ENST00000481098 ITPR1Q14643 2758 aa2.65□□□□□ -1.99
GTF3C3-211ENST00000481098 ROMO1P60602 79 aa2.65□□□□□ -1.99
GTF3C3-211ENST00000481098 KRTAP25-1Q3LHN0 102 aa2.65□□□□□ -1.99
GTF3C3-211ENST00000481098 C1orf134Q5TEV5 83 aa2.65□□□□□ -1.99
GTF3C3-211ENST00000481098 EPG5Q9HCE0 2579 aa2.65□□□□□ -1.99
GTF3C3-211ENST00000481098 NCOR2Q9Y618 2525 aa2.65□□□□□ -1.99
GTF3C3-211ENST00000481098 LY6G6CO95867 125 aa2.64□□□□□ -1.99
GTF3C3-211ENST00000481098 DMXL1Q9Y485 3027 aa2.64□□□□□ -1.99
GTF3C3-211ENST00000481098 ACACBO00763 2458 aa2.64□□□□□ -1.99
GTF3C3-211ENST00000481098 ANKRD17O75179 2603 aaKnown RBP2.63□□□□□ -1.99
GTF3C3-211ENST00000481098 ASH1LQ9NR48 2969 aaKnown RBP2.63□□□□□ -1.99
GTF3C3-211ENST00000481098 LAMA5O15230 3695 aa2.63□□□□□ -1.99
GTF3C3-211ENST00000481098 PTPN13Q12923 2485 aa2.62□□□□□ -1.99
GTF3C3-211ENST00000481098 K7EIL1 84 aa2.62□□□□□ -1.99
GTF3C3-211ENST00000481098 SSBP3-AS1Q7Z2R9 100 aa2.62□□□□□ -1.99
GTF3C3-211ENST00000481098 UTP20O75691 2785 aaKnown RBP2.62□□□□□ -1.99
GTF3C3-211ENST00000481098 MXRA5Q9NR99 2828 aa2.61□□□□□ -1.99
GTF3C3-211ENST00000481098 K7ERS5 55 aa2.61□□□□□ -1.99
GTF3C3-211ENST00000481098 RELNP78509 3460 aa2.61□□□□□ -1.99
GTF3C3-211ENST00000481098 MUC3AQ02505 3323 aa2.6□□□□□ -1.99
GTF3C3-211ENST00000481098 GCN1Q92616 2671 aaKnown RBP2.6□□□□□ -1.99
GTF3C3-211ENST00000481098 SPACA4Q8TDM5 124 aa2.6□□□□□ -1.99
GTF3C3-211ENST00000481098 LRRK2Q5S007 2527 aa2.6□□□□□ -1.99
GTF3C3-211ENST00000481098 NBPF19A0A087WUL8 3843 aa2.59□□□□□ -1.99
GTF3C3-211ENST00000481098 POLQO75417 2590 aa2.58□□□□□ -2
GTF3C3-211ENST00000481098 SONP18583 2426 aaKnown RBP2.58□□□□□ -2
GTF3C3-211ENST00000481098 NBEAL2Q6ZNJ1 2754 aa2.57□□□□□ -2
GTF3C3-211ENST00000481098 COL12A1Q99715 3063 aa2.57□□□□□ -2
GTF3C3-211ENST00000481098 PKD1L2Q7Z442 2459 aa2.57□□□□□ -2
GTF3C3-211ENST00000481098 SPINK6Q6UWN8 80 aa2.57□□□□□ -2
GTF3C3-211ENST00000481098 UBE2DNLQ8IWF7 75 aa2.57□□□□□ -2
GTF3C3-211ENST00000481098 APCP25054 2843 aa2.57□□□□□ -2
GTF3C3-211ENST00000481098 ZANQ9Y493 2812 aa2.57□□□□□ -2
GTF3C3-211ENST00000481098 AKAP9Q99996 3911 aa2.57□□□□□ -2
GTF3C3-211ENST00000481098 FAM208BQ5VWN6 2430 aa2.57□□□□□ -2
GTF3C3-211ENST00000481098 A0A1B0GU33 70 aa2.56□□□□□ -2
GTF3C3-211ENST00000481098 SPTBN4Q9H254 2564 aa2.56□□□□□ -2
GTF3C3-211ENST00000481098 TEX15Q9BXT5 2789 aa2.56□□□□□ -2
GTF3C3-211ENST00000481098 CCDC168Q8NDH2 2452 aa2.56□□□□□ -2
GTF3C3-211ENST00000481098 CACNA1AO00555 2505 aa2.56□□□□□ -2
GTF3C3-211ENST00000481098 MYO18BQ8IUG5 2567 aa2.55□□□□□ -2
GTF3C3-211ENST00000481098 CHD8Q9HCK8 2581 aa2.55□□□□□ -2
GTF3C3-211ENST00000481098 ITPR3Q14573 2671 aa2.55□□□□□ -2
GTF3C3-211ENST00000481098 SPINT4Q6UDR6 99 aa2.55□□□□□ -2
GTF3C3-211ENST00000481098 Q6ZSA8 131 aa2.55□□□□□ -2
GTF3C3-211ENST00000481098 ABCA12Q86UK0 2595 aa2.55□□□□□ -2
GTF3C3-211ENST00000481098 SETD2Q9BYW2 2564 aaPredicted RBP2.55□□□□□ -2
GTF3C3-211ENST00000481098 PSORS1C2Q9UIG4 136 aa2.55□□□□□ -2
GTF3C3-211ENST00000481098 UNC79Q9P2D8 2635 aa2.55□□□□□ -2
GTF3C3-211ENST00000481098 CFAP46Q8IYW2 2715 aa2.54□□□□□ -2
GTF3C3-211ENST00000481098 H0YAA0 97 aa2.54□□□□□ -2
GTF3C3-211ENST00000481098 KRTAP12-4P60329 112 aa2.54□□□□□ -2
GTF3C3-211ENST00000481098 H1FX-AS1Q4G0G2 97 aa2.54□□□□□ -2
GTF3C3-211ENST00000481098 FBN2P35556 2912 aa2.54□□□□□ -2
GTF3C3-211ENST00000481098 MTORP42345 2549 aa2.53□□□□□ -2
GTF3C3-211ENST00000481098 ALMS1Q8TCU4 4167 aa2.53□□□□□ -2
GTF3C3-211ENST00000481098 VPS13CQ709C8 3753 aa2.53□□□□□ -2
GTF3C3-211ENST00000481098 CELSR2Q9HCU4 2923 aa2.53□□□□□ -2
GTF3C3-211ENST00000481098 NBDYA0A0U1RRE5 68 aa2.53□□□□□ -2
GTF3C3-211ENST00000481098 NUPR2A6NF83 97 aa2.53□□□□□ -2
GTF3C3-211ENST00000481098 APLNQ9ULZ1 77 aa2.53□□□□□ -2
GTF3C3-211ENST00000481098 F8P00451 2351 aa2.53□□□□□ -2
GTF3C3-211ENST00000481098 FLNCQ14315 2725 aa2.52□□□□□ -2.01
GTF3C3-211ENST00000481098 FLNAP21333 2647 aaKnown RBP2.52□□□□□ -2.01
GTF3C3-211ENST00000481098 KRTAP12-3P60328 96 aa2.52□□□□□ -2.01
GTF3C3-211ENST00000481098 KRTAP6-3Q3LI67 103 aa2.52□□□□□ -2.01
GTF3C3-211ENST00000481098 COX6B2Q6YFQ2 88 aa2.52□□□□□ -2.01
GTF3C3-211ENST00000481098 KMT2BQ9UMN6 2715 aaPredicted RBP2.52□□□□□ -2.01
GTF3C3-211ENST00000481098 CRYBG3Q68DQ2 2970 aa2.52□□□□□ -2.01
GTF3C3-211ENST00000481098 ZNF462Q96JM2 2506 aa2.51□□□□□ -2.01
GTF3C3-211ENST00000481098 Q6ZRN7 208 aaPredicted RBP2.51□□□□□ -2.01
GTF3C3-211ENST00000481098 SMR3AQ99954 134 aa2.51□□□□□ -2.01
GTF3C3-211ENST00000481098 NIPBLQ6KC79 2804 aaeCLIP2.5□□□□□ -2.01
GTF3C3-211ENST00000481098 UBR5O95071 2799 aaPredicted RBP2.5□□□□□ -2.01
GTF3C3-211ENST00000481098 HIVEP1P15822 2718 aa2.5□□□□□ -2.01
GTF3C3-211ENST00000481098 SPINK1P00995 79 aa2.5□□□□□ -2.01
GTF3C3-211ENST00000481098 P0C880 135 aa2.5□□□□□ -2.01
GTF3C3-211ENST00000481098 PIEZO1Q92508 2521 aa2.5□□□□□ -2.01
GTF3C3-211ENST00000481098 NF1P21359 2839 aa2.49□□□□□ -2.01
GTF3C3-211ENST00000481098 DNAH1Q9P2D7 4330 aa2.49□□□□□ -2.01
GTF3C3-211ENST00000481098 A0A087WTM6 91 aa2.49□□□□□ -2.01
GTF3C3-211ENST00000481098 ANK3Q12955 4377 aaKnown RBP2.49□□□□□ -2.01
GTF3C3-211ENST00000481098 IGSF10Q6WRI0 2623 aa2.48□□□□□ -2.01
GTF3C3-211ENST00000481098 RPS29P62273 56 aaKnown RBP2.48□□□□□ -2.01
GTF3C3-211ENST00000481098 J3QKU1 62 aa2.47□□□□□ -2.01
GTF3C3-211ENST00000481098 RPL37P61927 97 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms