RNA–Protein interactions for RNA: ENST00000481038.5

GPCPD1-205, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 2

Gene GPCPD1, Length 6,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-205ENST00000481038 PRO2289Q9P1D8 64 aa2.63□□□□□ -1.99
GPCPD1-205ENST00000481038 TEP1Q99973 2627 aaKnown RBP2.61□□□□□ -1.99
GPCPD1-205ENST00000481038 TEX15Q9BXT5 2789 aa2.61□□□□□ -1.99
GPCPD1-205ENST00000481038 COL6A5A8TX70 2615 aa2.61□□□□□ -1.99
GPCPD1-205ENST00000481038 SMG1Q96Q15 3661 aaKnown RBP2.61□□□□□ -1.99
GPCPD1-205ENST00000481038 WDFY3Q8IZQ1 3526 aa2.6□□□□□ -1.99
GPCPD1-205ENST00000481038 CENPEQ02224 2701 aa2.6□□□□□ -1.99
GPCPD1-205ENST00000481038 KRTAP1-5Q9BYS1 174 aa2.6□□□□□ -1.99
GPCPD1-205ENST00000481038 ITPR2Q14571 2701 aa2.6□□□□□ -1.99
GPCPD1-205ENST00000481038 NSD1Q96L73 2696 aaPredicted RBP2.59□□□□□ -1.99
GPCPD1-205ENST00000481038 Q6ZRN7 208 aaPredicted RBP2.59□□□□□ -1.99
GPCPD1-205ENST00000481038 STAB1Q9NY15 2570 aa2.59□□□□□ -2
GPCPD1-205ENST00000481038 RPS29P62273 56 aaKnown RBP2.58□□□□□ -2
GPCPD1-205ENST00000481038 LCE2DQ5TA82 110 aaPredicted RBP2.58□□□□□ -2
GPCPD1-205ENST00000481038 HIVEP1P15822 2718 aa2.58□□□□□ -2
GPCPD1-205ENST00000481038 LRBAP50851 2863 aa2.58□□□□□ -2
GPCPD1-205ENST00000481038 SMR3BP02814 79 aaPredicted RBP2.57□□□□□ -2
GPCPD1-205ENST00000481038 BOD1L1Q8NFC6 3051 aa2.57□□□□□ -2
GPCPD1-205ENST00000481038 APCP25054 2843 aa2.57□□□□□ -2
GPCPD1-205ENST00000481038 Q6ZSA8 131 aa2.57□□□□□ -2
GPCPD1-205ENST00000481038 ATMQ13315 3056 aa2.57□□□□□ -2
GPCPD1-205ENST00000481038 H0YAA0 97 aa2.56□□□□□ -2
GPCPD1-205ENST00000481038 Q5VSD8 79 aa2.56□□□□□ -2
GPCPD1-205ENST00000481038 ZFHX3Q15911 3703 aa2.56□□□□□ -2
GPCPD1-205ENST00000481038 M0QZ58 72 aa2.56□□□□□ -2
GPCPD1-205ENST00000481038 KRTAP10-1P60331 282 aa2.56□□□□□ -2
GPCPD1-205ENST00000481038 COL12A1Q99715 3063 aa2.55□□□□□ -2
GPCPD1-205ENST00000481038 NF1P21359 2839 aa2.54□□□□□ -2
GPCPD1-205ENST00000481038 LAMA5O15230 3695 aa2.54□□□□□ -2
GPCPD1-205ENST00000481038 CELSR3Q9NYQ7 3312 aa2.54□□□□□ -2
GPCPD1-205ENST00000481038 FLG2Q5D862 2391 aaPredicted RBP2.54□□□□□ -2
GPCPD1-205ENST00000481038 KRTAP10-2P60368 255 aa2.54□□□□□ -2
GPCPD1-205ENST00000481038 OTOGQ6ZRI0 2925 aa2.54□□□□□ -2
GPCPD1-205ENST00000481038 UTP20O75691 2785 aaKnown RBP2.53□□□□□ -2
GPCPD1-205ENST00000481038 MAP1AP78559 2803 aaPredicted RBP2.51□□□□□ -2.01
GPCPD1-205ENST00000481038 TACC2O95359 2948 aa2.51□□□□□ -2.01
GPCPD1-205ENST00000481038 KRTAP19-4Q3LI73 84 aa2.5□□□□□ -2.01
GPCPD1-205ENST00000481038 KRTAP15-1Q3LI76 137 aa2.5□□□□□ -2.01
GPCPD1-205ENST00000481038 PDZD2O15018 2839 aa2.49□□□□□ -2.01
GPCPD1-205ENST00000481038 NOTCH1P46531 2555 aa2.49□□□□□ -2.01
GPCPD1-205ENST00000481038 CELSR1Q9NYQ6 3014 aa2.49□□□□□ -2.01
GPCPD1-205ENST00000481038 KRTAP10-8P60410 259 aa2.48□□□□□ -2.01
GPCPD1-205ENST00000481038 KRTAP13-1Q8IUC0 172 aa2.48□□□□□ -2.01
GPCPD1-205ENST00000481038 TPRXLQ17RH7 258 aa2.47□□□□□ -2.01
GPCPD1-205ENST00000481038 CELSR2Q9HCU4 2923 aa2.47□□□□□ -2.01
GPCPD1-205ENST00000481038 FBN2P35556 2912 aa2.46□□□□□ -2.02
GPCPD1-205ENST00000481038 DNHD1Q96M86 4753 aa2.46□□□□□ -2.02
GPCPD1-205ENST00000481038 NIPBLQ6KC79 2804 aaeCLIP2.46□□□□□ -2.02
GPCPD1-205ENST00000481038 RELNP78509 3460 aa2.45□□□□□ -2.02
GPCPD1-205ENST00000481038 CRYBG3Q68DQ2 2970 aa2.45□□□□□ -2.02
GPCPD1-205ENST00000481038 HRNRQ86YZ3 2850 aaPredicted RBP2.45□□□□□ -2.02
GPCPD1-205ENST00000481038 DCHS2Q6V1P9 2916 aa2.44□□□□□ -2.02
GPCPD1-205ENST00000481038 TNP1P09430 55 aa2.44□□□□□ -2.02
GPCPD1-205ENST00000481038 A0A1B0GVY2 172 aa2.42□□□□□ -2.02
GPCPD1-205ENST00000481038 FBN3Q75N90 2809 aa2.42□□□□□ -2.02
GPCPD1-205ENST00000481038 KRTAP7-1Q8IUC3 87 aa2.42□□□□□ -2.02
GPCPD1-205ENST00000481038 NBEAL1Q6ZS30 2694 aa2.4□□□□□ -2.02
GPCPD1-205ENST00000481038 ADGRG4Q8IZF6 3080 aa2.39□□□□□ -2.03
GPCPD1-205ENST00000481038 KRTAP13-2Q52LG2 175 aa2.38□□□□□ -2.03
GPCPD1-205ENST00000481038 KRTAP3-3Q9BYR6 98 aa2.38□□□□□ -2.03
GPCPD1-205ENST00000481038 KRTAP3-2Q9BYR7 98 aa2.38□□□□□ -2.03
GPCPD1-205ENST00000481038 ZANQ9Y493 2812 aa2.37□□□□□ -2.03
GPCPD1-205ENST00000481038 STAB2Q8WWQ8 2551 aa2.36□□□□□ -2.03
GPCPD1-205ENST00000481038 MXRA5Q9NR99 2828 aa2.36□□□□□ -2.03
GPCPD1-205ENST00000481038 KRTAP1-4P0C5Y4 121 aa2.36□□□□□ -2.03
GPCPD1-205ENST00000481038 BSNQ9UPA5 3926 aa2.34□□□□□ -2.03
GPCPD1-205ENST00000481038 PKD1L1Q8TDX9 2849 aa2.34□□□□□ -2.03
GPCPD1-205ENST00000481038 M0R2T5 61 aa2.34□□□□□ -2.04
GPCPD1-205ENST00000481038 NBEAL2Q6ZNJ1 2754 aa2.34□□□□□ -2.04
GPCPD1-205ENST00000481038 DMBT1Q9UGM3 2413 aaPredicted RBP2.33□□□□□ -2.04
GPCPD1-205ENST00000481038 MT3P25713 68 aa2.32□□□□□ -2.04
GPCPD1-205ENST00000481038 SPENQ96T58 3664 aaKnown RBP2.32□□□□□ -2.04
GPCPD1-205ENST00000481038 KRTAP12-2P59991 146 aa2.32□□□□□ -2.04
GPCPD1-205ENST00000481038 KRTAP13-3Q3SY46 172 aa2.29□□□□□ -2.04
GPCPD1-205ENST00000481038 CSMD1Q96PZ7 3565 aa2.28□□□□□ -2.04
GPCPD1-205ENST00000481038 ANK3Q12955 4377 aaKnown RBP2.28□□□□□ -2.04
GPCPD1-205ENST00000481038 FBN1P35555 2871 aaKnown RBP2.27□□□□□ -2.05
GPCPD1-205ENST00000481038 CSMD2Q7Z408 3487 aa2.27□□□□□ -2.05
GPCPD1-205ENST00000481038 XP32Q5T750 250 aa2.27□□□□□ -2.05
GPCPD1-205ENST00000481038 MEGF8Q7Z7M0 2845 aa2.27□□□□□ -2.05
GPCPD1-205ENST00000481038 NBPF19A0A087WUL8 3843 aa2.26□□□□□ -2.05
GPCPD1-205ENST00000481038 TENM1Q9UKZ4 2725 aa2.26□□□□□ -2.05
GPCPD1-205ENST00000481038 KRTAP13-4Q3LI77 160 aa2.26□□□□□ -2.05
GPCPD1-205ENST00000481038 KRTAP12-1P59990 96 aa2.25□□□□□ -2.05
GPCPD1-205ENST00000481038 TGP01266 2768 aa2.24□□□□□ -2.05
GPCPD1-205ENST00000481038 RYR1P21817 5038 aa2.24□□□□□ -2.05
GPCPD1-205ENST00000481038 TENM3Q9P273 2699 aa2.22□□□□□ -2.05
GPCPD1-205ENST00000481038 ZNF469Q96JG9 3925 aaPredicted RBP2.22□□□□□ -2.05
GPCPD1-205ENST00000481038 TENM2Q9NT68 2774 aa2.21□□□□□ -2.06
GPCPD1-205ENST00000481038 VWFP04275 2813 aa2.21□□□□□ -2.06
GPCPD1-205ENST00000481038 ALMS1Q8TCU4 4167 aa2.21□□□□□ -2.06
GPCPD1-205ENST00000481038 AKAP9Q99996 3911 aa2.19□□□□□ -2.06
GPCPD1-205ENST00000481038 VPS13CQ709C8 3753 aa2.18□□□□□ -2.06
GPCPD1-205ENST00000481038 KMT2CQ8NEZ4 4911 aaKnown RBP2.18□□□□□ -2.06
GPCPD1-205ENST00000481038 KRTAP10-4P60372 401 aaPredicted RBP2.17□□□□□ -2.06
GPCPD1-205ENST00000481038 MT1HL1P0DM35 61 aa2.16□□□□□ -2.06
GPCPD1-205ENST00000481038 COL7A1Q02388 2944 aa2.14□□□□□ -2.07
GPCPD1-205ENST00000481038 HYDINQ4G0P3 5121 aa2.14□□□□□ -2.07
GPCPD1-205ENST00000481038 EPPK1P58107 5090 aaKnown RBP2.13□□□□□ -2.07
GPCPD1-205ENST00000481038 PCLOQ9Y6V0 5065 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms