RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 A0A1B0GVX0 72 aa8.73□□□□□ -1.01
HSPG2-209ENST00000480900 C8orf87E5RJ46 101 aa8.73□□□□□ -1.01
HSPG2-209ENST00000480900 J3KT08 172 aa8.73□□□□□ -1.01
HSPG2-209ENST00000480900 Q6ZQT0 140 aa8.73□□□□□ -1.01
HSPG2-209ENST00000480900 LOC110117498A0A087WWA1 95 aa8.72□□□□□ -1.01
HSPG2-209ENST00000480900 TRBV20-1A0A075B6N2 111 aa8.71□□□□□ -1.02
HSPG2-209ENST00000480900 A0A1B0GW54 56 aa8.7□□□□□ -1.02
HSPG2-209ENST00000480900 PDE6GP18545 87 aa8.7□□□□□ -1.02
HSPG2-209ENST00000480900 BATFQ16520 125 aa8.69□□□□□ -1.02
HSPG2-209ENST00000480900 LOC105371267A0A1B0GV96 52 aa8.66□□□□□ -1.02
HSPG2-209ENST00000480900 C14orf132Q9NPU4 83 aa8.66□□□□□ -1.02
HSPG2-209ENST00000480900 NDUFB1O75438 58 aa8.64□□□□□ -1.03
HSPG2-209ENST00000480900 C9orf118A6NHY6 69 aa8.62□□□□□ -1.03
HSPG2-209ENST00000480900 A8MWP4 228 aa8.61□□□□□ -1.03
HSPG2-209ENST00000480900 TAX1BP3O14907 124 aa8.59□□□□□ -1.03
HSPG2-209ENST00000480900 A0A1W2PPM0 123 aa8.58□□□□□ -1.04
HSPG2-209ENST00000480900 H3BT86 120 aa8.58□□□□□ -1.04
HSPG2-209ENST00000480900 HRES1P13985 223 aa8.58□□□□□ -1.04
HSPG2-209ENST00000480900 MPLKIPQ8TAP9 179 aa8.58□□□□□ -1.04
HSPG2-209ENST00000480900 ZCCHC13Q8WW36 166 aaKnown RBP8.58□□□□□ -1.04
HSPG2-209ENST00000480900 Q8N9P0 234 aaPredicted RBP8.57□□□□□ -1.04
HSPG2-209ENST00000480900 C8orf17Q9NRJ1 99 aa8.57□□□□□ -1.04
HSPG2-209ENST00000480900 RBM12B-AS1Q9P1G2 102 aa8.57□□□□□ -1.04
HSPG2-209ENST00000480900 CRCT1Q9UGL9 99 aa8.57□□□□□ -1.04
HSPG2-209ENST00000480900 IGKV3D-7A0A0C4DH55 119 aa8.56□□□□□ -1.04
HSPG2-209ENST00000480900 FAM236DA0A1B0GTK5 79 aa8.56□□□□□ -1.04
HSPG2-209ENST00000480900 FAM236CP0DP71 79 aa8.56□□□□□ -1.04
HSPG2-209ENST00000480900 FSIP2Q5CZC0 6907 aa8.56□□□□□ -1.04
HSPG2-209ENST00000480900 NREPQ16612 68 aa8.55□□□□□ -1.04
HSPG2-209ENST00000480900 PRR15Q8IV56 129 aa8.53□□□□□ -1.04
HSPG2-209ENST00000480900 MTURNQ8N3F0 131 aa8.52□□□□□ -1.05
HSPG2-209ENST00000480900 Q6ZVQ6 151 aa8.5□□□□□ -1.05
HSPG2-209ENST00000480900 SPINK7P58062 85 aa8.48□□□□□ -1.05
HSPG2-209ENST00000480900 KRTAP9-8Q9BYQ0 159 aa8.47□□□□□ -1.05
HSPG2-209ENST00000480900 SPCS1Q9Y6A9 102 aa8.46□□□□□ -1.06
HSPG2-209ENST00000480900 MMP24-AS1A0A0U1RRL7 71 aa8.45□□□□□ -1.06
HSPG2-209ENST00000480900 TMEM254Q8TBM7 123 aa8.45□□□□□ -1.06
HSPG2-209ENST00000480900 MRPL34Q9BQ48 92 aaKnown RBP8.43□□□□□ -1.06
HSPG2-209ENST00000480900 K7EQZ3 153 aa8.42□□□□□ -1.06
HSPG2-209ENST00000480900 BPY2O14599 106 aa8.41□□□□□ -1.06
HSPG2-209ENST00000480900 COL5A1-AS1Q5SY13 56 aa8.41□□□□□ -1.06
HSPG2-209ENST00000480900 hDV103S1A0JD37 113 aa8.4□□□□□ -1.06
HSPG2-209ENST00000480900 SMCPP49901 116 aaPredicted RBP8.39□□□□□ -1.07
HSPG2-209ENST00000480900 MT2AP02795 61 aa8.36□□□□□ -1.07
HSPG2-209ENST00000480900 WFDC13Q8IUB5 93 aa8.36□□□□□ -1.07
HSPG2-209ENST00000480900 NDUFS5O43920 106 aa8.34□□□□□ -1.07
HSPG2-209ENST00000480900 PRO0461Q9UI25 63 aa8.34□□□□□ -1.07
HSPG2-209ENST00000480900 K7EP34 96 aa8.32□□□□□ -1.08
HSPG2-209ENST00000480900 Q8N9L7 120 aa8.3□□□□□ -1.08
HSPG2-209ENST00000480900 MT1FP04733 61 aa8.29□□□□□ -1.08
HSPG2-209ENST00000480900 CASC2Q6XLA1 102 aa8.28□□□□□ -1.08
HSPG2-209ENST00000480900 UBL5Q9BZL1 73 aa8.27□□□□□ -1.09
HSPG2-209ENST00000480900 LINC00846Q9NV44 126 aa8.26□□□□□ -1.09
HSPG2-209ENST00000480900 KRTAP10-10P60014 251 aa8.25□□□□□ -1.09
HSPG2-209ENST00000480900 Q5W150 140 aa8.24□□□□□ -1.09
HSPG2-209ENST00000480900 C7orf65Q6ZTY9 151 aa8.23□□□□□ -1.09
HSPG2-209ENST00000480900 GTF2H5Q6ZYL4 71 aa8.23□□□□□ -1.09
HSPG2-209ENST00000480900 IGKV2D-30A0A075B6S6 120 aa8.22□□□□□ -1.09
HSPG2-209ENST00000480900 HCG22E2RYF7 251 aa8.22□□□□□ -1.09
HSPG2-209ENST00000480900 IGKV2-30P06310 120 aa8.22□□□□□ -1.09
HSPG2-209ENST00000480900 KRTAP9-3Q9BYQ3 159 aa8.21□□□□□ -1.1
HSPG2-209ENST00000480900 CXCL6P80162 114 aa8.2□□□□□ -1.1
HSPG2-209ENST00000480900 H1FX-AS1Q4G0G2 97 aa8.19□□□□□ -1.1
HSPG2-209ENST00000480900 F8W1H4 67 aa8.17□□□□□ -1.1
HSPG2-209ENST00000480900 PCP4L1A6NKN8 68 aa8.16□□□□□ -1.1
HSPG2-209ENST00000480900 LCE2BO14633 110 aa8.15□□□□□ -1.1
HSPG2-209ENST00000480900 USH2AO75445 5202 aa8.15□□□□□ -1.11
HSPG2-209ENST00000480900 ETDBQ3ZM63 59 aa8.13□□□□□ -1.11
HSPG2-209ENST00000480900 SSPOA2VEC9 5147 aa8.08□□□□□ -1.12
HSPG2-209ENST00000480900 C4orf26Q17RF5 130 aa8.07□□□□□ -1.12
HSPG2-209ENST00000480900 TP53AIP1Q9HCN2 124 aa8.05□□□□□ -1.12
HSPG2-209ENST00000480900 KRTAP19-1Q8IUB9 90 aa8□□□□□ -1.13
HSPG2-209ENST00000480900 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.97□□□□□ -1.13
HSPG2-209ENST00000480900 ACYP1P07311 99 aa7.97□□□□□ -1.13
HSPG2-209ENST00000480900 FAM240AA0A1B0GVK7 77 aa7.95□□□□□ -1.14
HSPG2-209ENST00000480900 KRTAP3-1Q9BYR8 98 aa7.95□□□□□ -1.14
HSPG2-209ENST00000480900 C1orf64Q8NEQ6 169 aa7.93□□□□□ -1.14
HSPG2-209ENST00000480900 FCGBPQ9Y6R7 5405 aaPredicted RBP7.92□□□□□ -1.14
HSPG2-209ENST00000480900 ATP5EP2Q5VTU8 51 aa7.92□□□□□ -1.14
HSPG2-209ENST00000480900 S4R3F8 94 aa7.91□□□□□ -1.14
HSPG2-209ENST00000480900 C5orf47Q569G3 176 aa7.9□□□□□ -1.14
HSPG2-209ENST00000480900 KRTAP19-6Q3LI70 58 aa7.89□□□□□ -1.15
HSPG2-209ENST00000480900 TRAV22A0A0B4J277 110 aa7.87□□□□□ -1.15
HSPG2-209ENST00000480900 CYP4F30PQ9H0H9 118 aa7.87□□□□□ -1.15
HSPG2-209ENST00000480900 KRTAP9-7A8MTY7 169 aa7.86□□□□□ -1.15
HSPG2-209ENST00000480900 CSAG1Q6PB30 78 aa7.85□□□□□ -1.15
HSPG2-209ENST00000480900 LCA10Q71F78 164 aa7.84□□□□□ -1.15
HSPG2-209ENST00000480900 LOC101927531A0A1B0GV80 90 aa7.83□□□□□ -1.16
HSPG2-209ENST00000480900 HIST1H4AP62805 103 aaKnown RBP7.83□□□□□ -1.16
HSPG2-209ENST00000480900 FAM236AA0A1B0GUQ0 79 aa7.8□□□□□ -1.16
HSPG2-209ENST00000480900 FAM236BA0A1B0GV22 79 aa7.8□□□□□ -1.16
HSPG2-209ENST00000480900 UQCRQO14949 82 aa7.79□□□□□ -1.16
HSPG2-209ENST00000480900 LINC00643Q86TS7 51 aa7.77□□□□□ -1.17
HSPG2-209ENST00000480900 ATOX1O00244 68 aa7.76□□□□□ -1.17
HSPG2-209ENST00000480900 H0Y9P7 68 aa7.74□□□□□ -1.17
HSPG2-209ENST00000480900 KRTAP3-3Q9BYR6 98 aa7.73□□□□□ -1.17
HSPG2-209ENST00000480900 A0A087WVE0 104 aa7.72□□□□□ -1.17
HSPG2-209ENST00000480900 A0A1B0GV90 55 aa7.72□□□□□ -1.17
HSPG2-209ENST00000480900 MACF1Q9UPN3 7388 aaKnown RBP7.71□□□□□ -1.18
HSPG2-209ENST00000480900 SPRR2GQ9BYE4 73 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms