RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 IGKV4-1P06312 121 aa7.75□□□□□ -1.17
LIMS3-203ENST00000480744 LINC00313P59037 77 aa7.75□□□□□ -1.17
LIMS3-203ENST00000480744 PCP4L1A6NKN8 68 aa7.74□□□□□ -1.17
LIMS3-203ENST00000480744 DSCR8Q96T75 97 aa7.74□□□□□ -1.17
LIMS3-203ENST00000480744 VPS25Q9BRG1 176 aa7.74□□□□□ -1.17
LIMS3-203ENST00000480744 FAM236DA0A1B0GTK5 79 aa7.73□□□□□ -1.17
LIMS3-203ENST00000480744 FAM236CP0DP71 79 aa7.73□□□□□ -1.17
LIMS3-203ENST00000480744 COL5A1-AS1Q5SY13 56 aa7.73□□□□□ -1.17
LIMS3-203ENST00000480744 Q6ZQT0 140 aa7.72□□□□□ -1.17
LIMS3-203ENST00000480744 DEFB116Q30KQ4 102 aa7.71□□□□□ -1.18
LIMS3-203ENST00000480744 KRTAP9-8Q9BYQ0 159 aa7.71□□□□□ -1.18
LIMS3-203ENST00000480744 C14orf132Q9NPU4 83 aa7.71□□□□□ -1.18
LIMS3-203ENST00000480744 LOC110117498A0A087WWA1 95 aa7.7□□□□□ -1.18
LIMS3-203ENST00000480744 KRTAP16-1A8MUX0 517 aa7.7□□□□□ -1.18
LIMS3-203ENST00000480744 JMJD7-PLA2G4BH0Y9G9 81 aa7.7□□□□□ -1.18
LIMS3-203ENST00000480744 LINC00472Q9H8W2 130 aa7.7□□□□□ -1.18
LIMS3-203ENST00000480744 SPCS1Q9Y6A9 102 aa7.7□□□□□ -1.18
LIMS3-203ENST00000480744 H3BT86 120 aa7.69□□□□□ -1.18
LIMS3-203ENST00000480744 NOTCH2NLQ7Z3S9 236 aa7.69□□□□□ -1.18
LIMS3-203ENST00000480744 IGHV6-1A0A0B4J1U7 121 aa7.67□□□□□ -1.18
LIMS3-203ENST00000480744 USH2AO75445 5202 aa7.67□□□□□ -1.18
LIMS3-203ENST00000480744 SMCPP49901 116 aaPredicted RBP7.66□□□□□ -1.18
LIMS3-203ENST00000480744 RBM12B-AS1Q9P1G2 102 aa7.65□□□□□ -1.18
LIMS3-203ENST00000480744 PRO0461Q9UI25 63 aa7.64□□□□□ -1.19
LIMS3-203ENST00000480744 K7EP34 96 aa7.63□□□□□ -1.19
LIMS3-203ENST00000480744 HRES1P13985 223 aa7.63□□□□□ -1.19
LIMS3-203ENST00000480744 SSPOA2VEC9 5147 aa7.63□□□□□ -1.19
LIMS3-203ENST00000480744 MT2AP02795 61 aa7.61□□□□□ -1.19
LIMS3-203ENST00000480744 PDE6GP18545 87 aa7.61□□□□□ -1.19
LIMS3-203ENST00000480744 MPLKIPQ8TAP9 179 aa7.6□□□□□ -1.19
LIMS3-203ENST00000480744 A0A1B0GVX0 72 aa7.58□□□□□ -1.2
LIMS3-203ENST00000480744 C8orf87E5RJ46 101 aa7.58□□□□□ -1.2
LIMS3-203ENST00000480744 C21orf62-AS1Q17RA5 79 aa7.58□□□□□ -1.2
LIMS3-203ENST00000480744 A0A1B0GW54 56 aa7.57□□□□□ -1.2
LIMS3-203ENST00000480744 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.56□□□□□ -1.2
LIMS3-203ENST00000480744 MT1FP04733 61 aa7.55□□□□□ -1.2
LIMS3-203ENST00000480744 J3KT08 172 aa7.53□□□□□ -1.2
LIMS3-203ENST00000480744 KRTAP10-10P60014 251 aa7.53□□□□□ -1.2
LIMS3-203ENST00000480744 KRTAP9-7A8MTY7 169 aa7.52□□□□□ -1.21
LIMS3-203ENST00000480744 ZCCHC13Q8WW36 166 aaKnown RBP7.52□□□□□ -1.21
LIMS3-203ENST00000480744 IGKV3D-7A0A0C4DH55 119 aa7.51□□□□□ -1.21
LIMS3-203ENST00000480744 NREPQ16612 68 aa7.5□□□□□ -1.21
LIMS3-203ENST00000480744 GTF2H5Q6ZYL4 71 aa7.5□□□□□ -1.21
LIMS3-203ENST00000480744 A8MWP4 228 aa7.49□□□□□ -1.21
LIMS3-203ENST00000480744 SPINK7P58062 85 aa7.49□□□□□ -1.21
LIMS3-203ENST00000480744 FCGBPQ9Y6R7 5405 aaPredicted RBP7.47□□□□□ -1.21
LIMS3-203ENST00000480744 NDUFB1O75438 58 aa7.47□□□□□ -1.21
LIMS3-203ENST00000480744 KRTAP9-3Q9BYQ3 159 aa7.47□□□□□ -1.21
LIMS3-203ENST00000480744 Q6ZVQ6 151 aa7.45□□□□□ -1.22
LIMS3-203ENST00000480744 KRTAP19-1Q8IUB9 90 aa7.45□□□□□ -1.22
LIMS3-203ENST00000480744 C8orf17Q9NRJ1 99 aa7.45□□□□□ -1.22
LIMS3-203ENST00000480744 F8W1H4 67 aa7.44□□□□□ -1.22
LIMS3-203ENST00000480744 PRR15Q8IV56 129 aa7.44□□□□□ -1.22
LIMS3-203ENST00000480744 K7EQZ3 153 aa7.43□□□□□ -1.22
LIMS3-203ENST00000480744 ETDBQ3ZM63 59 aa7.43□□□□□ -1.22
LIMS3-203ENST00000480744 LINC00846Q9NV44 126 aa7.43□□□□□ -1.22
LIMS3-203ENST00000480744 Q8N9P0 234 aaPredicted RBP7.42□□□□□ -1.22
LIMS3-203ENST00000480744 MMP24-AS1A0A0U1RRL7 71 aa7.41□□□□□ -1.22
LIMS3-203ENST00000480744 WFDC13Q8IUB5 93 aa7.41□□□□□ -1.22
LIMS3-203ENST00000480744 BPY2O14599 106 aa7.39□□□□□ -1.23
LIMS3-203ENST00000480744 Q8N9L7 120 aa7.39□□□□□ -1.23
LIMS3-203ENST00000480744 A0A1B0GV90 55 aa7.35□□□□□ -1.23
LIMS3-203ENST00000480744 TMEM254Q8TBM7 123 aa7.33□□□□□ -1.24
LIMS3-203ENST00000480744 UBL5Q9BZL1 73 aa7.33□□□□□ -1.24
LIMS3-203ENST00000480744 hDV103S1A0JD37 113 aa7.32□□□□□ -1.24
LIMS3-203ENST00000480744 MRPL34Q9BQ48 92 aaKnown RBP7.32□□□□□ -1.24
LIMS3-203ENST00000480744 NDUFS5O43920 106 aa7.27□□□□□ -1.25
LIMS3-203ENST00000480744 CASC2Q6XLA1 102 aa7.25□□□□□ -1.25
LIMS3-203ENST00000480744 MACF1Q9UPN3 7388 aaKnown RBP7.25□□□□□ -1.25
LIMS3-203ENST00000480744 KRTAP19-6Q3LI70 58 aa7.24□□□□□ -1.25
LIMS3-203ENST00000480744 LOC100996750A0A140TA64 210 aa7.23□□□□□ -1.25
LIMS3-203ENST00000480744 H1FX-AS1Q4G0G2 97 aa7.23□□□□□ -1.25
LIMS3-203ENST00000480744 KRTAP4-6Q9BYQ5 205 aa7.23□□□□□ -1.25
LIMS3-203ENST00000480744 CXCL6P80162 114 aa7.22□□□□□ -1.25
LIMS3-203ENST00000480744 Q5W150 140 aa7.22□□□□□ -1.25
LIMS3-203ENST00000480744 IGKV2D-30A0A075B6S6 120 aa7.21□□□□□ -1.26
LIMS3-203ENST00000480744 HCG22E2RYF7 251 aa7.21□□□□□ -1.26
LIMS3-203ENST00000480744 IGKV2-30P06310 120 aa7.21□□□□□ -1.26
LIMS3-203ENST00000480744 SYNE2Q8WXH0 6885 aaKnown RBP7.2□□□□□ -1.26
LIMS3-203ENST00000480744 FAM240AA0A1B0GVK7 77 aa7.2□□□□□ -1.26
LIMS3-203ENST00000480744 ACYP1P07311 99 aa7.18□□□□□ -1.26
LIMS3-203ENST00000480744 C7orf65Q6ZTY9 151 aa7.16□□□□□ -1.26
LIMS3-203ENST00000480744 C4orf26Q17RF5 130 aa7.09□□□□□ -1.27
LIMS3-203ENST00000480744 ATP5EP2Q5VTU8 51 aa7.09□□□□□ -1.27
LIMS3-203ENST00000480744 LINC00643Q86TS7 51 aa7.05□□□□□ -1.28
LIMS3-203ENST00000480744 HIST1H4AP62805 103 aaKnown RBP7.04□□□□□ -1.28
LIMS3-203ENST00000480744 A0A087WVE0 104 aa7.03□□□□□ -1.28
LIMS3-203ENST00000480744 C5orf47Q569G3 176 aa7.03□□□□□ -1.28
LIMS3-203ENST00000480744 FAM236AA0A1B0GUQ0 79 aa7.01□□□□□ -1.29
LIMS3-203ENST00000480744 FAM236BA0A1B0GV22 79 aa7.01□□□□□ -1.29
LIMS3-203ENST00000480744 TP53AIP1Q9HCN2 124 aa7.01□□□□□ -1.29
LIMS3-203ENST00000480744 KRTAP6-3Q3LI67 103 aa7□□□□□ -1.29
LIMS3-203ENST00000480744 J3QR89 54 aa6.96□□□□□ -1.3
LIMS3-203ENST00000480744 S4R3F8 94 aa6.96□□□□□ -1.3
LIMS3-203ENST00000480744 TRAV22A0A0B4J277 110 aa6.93□□□□□ -1.3
LIMS3-203ENST00000480744 KRTAP3-1Q9BYR8 98 aa6.93□□□□□ -1.3
LIMS3-203ENST00000480744 C1orf64Q8NEQ6 169 aa6.92□□□□□ -1.3
LIMS3-203ENST00000480744 CSAG1Q6PB30 78 aa6.91□□□□□ -1.3
LIMS3-203ENST00000480744 LCA10Q71F78 164 aa6.9□□□□□ -1.3
LIMS3-203ENST00000480744 A6NN06 94 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms