RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 PCOTHQ58A44 107 aa13.44□□□□□ -0.26
PERM1-203ENST00000479361 IGHV6-1A0A0B4J1U7 121 aa13.43□□□□□ -0.26
PERM1-203ENST00000479361 Q75L30 129 aa13.43□□□□□ -0.26
PERM1-203ENST00000479361 A0A1B0GVX0 72 aa13.41□□□□□ -0.26
PERM1-203ENST00000479361 NDUFB1O75438 58 aa13.41□□□□□ -0.26
PERM1-203ENST00000479361 A0A0U1RQV1 116 aa13.38□□□□□ -0.27
PERM1-203ENST00000479361 C8orf87E5RJ46 101 aa13.38□□□□□ -0.27
PERM1-203ENST00000479361 C20orf166-AS1Q96NR2 134 aa13.37□□□□□ -0.27
PERM1-203ENST00000479361 A8MWP4 228 aa13.35□□□□□ -0.27
PERM1-203ENST00000479361 ETDBQ3ZM63 59 aa13.35□□□□□ -0.27
PERM1-203ENST00000479361 ATP11AUNQ6ZP68 121 aa13.34□□□□□ -0.27
PERM1-203ENST00000479361 A8MUU9 505 aa13.33□□□□□ -0.28
PERM1-203ENST00000479361 NOTCH2NLQ7Z3S9 236 aa13.33□□□□□ -0.28
PERM1-203ENST00000479361 KRTAP4-1Q9BYQ7 146 aa13.32□□□□□ -0.28
PERM1-203ENST00000479361 KRTAP16-1A8MUX0 517 aa13.3□□□□□ -0.28
PERM1-203ENST00000479361 IGKV3D-7A0A0C4DH55 119 aa13.28□□□□□ -0.28
PERM1-203ENST00000479361 Q6ZVQ6 151 aa13.28□□□□□ -0.28
PERM1-203ENST00000479361 BPY2O14599 106 aa13.26□□□□□ -0.29
PERM1-203ENST00000479361 PRR15Q8IV56 129 aa13.25□□□□□ -0.29
PERM1-203ENST00000479361 UBL5Q9BZL1 73 aa13.25□□□□□ -0.29
PERM1-203ENST00000479361 LINC00846Q9NV44 126 aa13.24□□□□□ -0.29
PERM1-203ENST00000479361 A0A1B0GV90 55 aa13.23□□□□□ -0.29
PERM1-203ENST00000479361 C8orf17Q9NRJ1 99 aa13.22□□□□□ -0.29
PERM1-203ENST00000479361 K7EQZ3 153 aa13.16□□□□□ -0.3
PERM1-203ENST00000479361 Q8N9P0 234 aaPredicted RBP13.1□□□□□ -0.31
PERM1-203ENST00000479361 MMP24-AS1A0A0U1RRL7 71 aa13.09□□□□□ -0.31
PERM1-203ENST00000479361 ACYP1P07311 99 aa13.08□□□□□ -0.32
PERM1-203ENST00000479361 TMEM254Q8TBM7 123 aa13.06□□□□□ -0.32
PERM1-203ENST00000479361 hDV103S1A0JD37 113 aa13.05□□□□□ -0.32
PERM1-203ENST00000479361 Q8N9L7 120 aa13.05□□□□□ -0.32
PERM1-203ENST00000479361 FAT4Q6V0I7 4981 aa13.05□□□□□ -0.32
PERM1-203ENST00000479361 MRPL34Q9BQ48 92 aaKnown RBP13.04□□□□□ -0.32
PERM1-203ENST00000479361 FAM240AA0A1B0GVK7 77 aa13.03□□□□□ -0.32
PERM1-203ENST00000479361 ZCCHC13Q8WW36 166 aaKnown RBP13.01□□□□□ -0.33
PERM1-203ENST00000479361 CXCL6P80162 114 aa13□□□□□ -0.33
PERM1-203ENST00000479361 CASC2Q6XLA1 102 aa12.96□□□□□ -0.33
PERM1-203ENST00000479361 WFDC13Q8IUB5 93 aa12.94□□□□□ -0.34
PERM1-203ENST00000479361 NDUFS5O43920 106 aa12.93□□□□□ -0.34
PERM1-203ENST00000479361 KRTAP19-2Q3LHN2 52 aa12.93□□□□□ -0.34
PERM1-203ENST00000479361 LCE2AQ5TA79 106 aaPredicted RBP12.91□□□□□ -0.34
PERM1-203ENST00000479361 HCG22E2RYF7 251 aa12.9□□□□□ -0.34
PERM1-203ENST00000479361 LCE2CQ5TA81 110 aa12.89□□□□□ -0.35
PERM1-203ENST00000479361 COX6B2Q6YFQ2 88 aa12.89□□□□□ -0.35
PERM1-203ENST00000479361 ATP5EP2Q5VTU8 51 aa12.86□□□□□ -0.35
PERM1-203ENST00000479361 J3QR89 54 aa12.82□□□□□ -0.36
PERM1-203ENST00000479361 SPINK7P58062 85 aa12.8□□□□□ -0.36
PERM1-203ENST00000479361 LINC00643Q86TS7 51 aa12.77□□□□□ -0.37
PERM1-203ENST00000479361 HRES1P13985 223 aa12.74□□□□□ -0.37
PERM1-203ENST00000479361 RBM12B-AS1Q9P1G2 102 aa12.74□□□□□ -0.37
PERM1-203ENST00000479361 MT1HP80294 61 aa12.73□□□□□ -0.37
PERM1-203ENST00000479361 HIST1H4AP62805 103 aaKnown RBP12.7□□□□□ -0.38
PERM1-203ENST00000479361 Q5W150 140 aa12.69□□□□□ -0.38
PERM1-203ENST00000479361 MPLKIPQ8TAP9 179 aa12.69□□□□□ -0.38
PERM1-203ENST00000479361 FAM236DA0A1B0GTK5 79 aa12.68□□□□□ -0.38
PERM1-203ENST00000479361 FAM236CP0DP71 79 aa12.68□□□□□ -0.38
PERM1-203ENST00000479361 TP53AIP1Q9HCN2 124 aa12.66□□□□□ -0.38
PERM1-203ENST00000479361 M0R2T5 61 aa12.61□□□□□ -0.39
PERM1-203ENST00000479361 IGKV2D-30A0A075B6S6 120 aa12.6□□□□□ -0.39
PERM1-203ENST00000479361 IGKV2-30P06310 120 aa12.6□□□□□ -0.39
PERM1-203ENST00000479361 C7orf65Q6ZTY9 151 aa12.6□□□□□ -0.39
PERM1-203ENST00000479361 FLGP20930 4061 aaPredicted RBP12.58□□□□□ -0.4
PERM1-203ENST00000479361 K7ERU9 68 aa12.54□□□□□ -0.4
PERM1-203ENST00000479361 A0A087WVE0 104 aa12.52□□□□□ -0.41
PERM1-203ENST00000479361 TRAV22A0A0B4J277 110 aa12.42□□□□□ -0.42
PERM1-203ENST00000479361 UQCRQO14949 82 aa12.41□□□□□ -0.42
PERM1-203ENST00000479361 KRTAP10-6P60371 365 aaPredicted RBP12.41□□□□□ -0.42
PERM1-203ENST00000479361 LORP23490 312 aaPredicted RBP12.38□□□□□ -0.43
PERM1-203ENST00000479361 ATOX1O00244 68 aa12.32□□□□□ -0.44
PERM1-203ENST00000479361 C4orf26Q17RF5 130 aa12.32□□□□□ -0.44
PERM1-203ENST00000479361 IMUPQ9GZP8 106 aa12.32□□□□□ -0.44
PERM1-203ENST00000479361 LOC101927531A0A1B0GV80 90 aa12.31□□□□□ -0.44
PERM1-203ENST00000479361 H1FX-AS1Q4G0G2 97 aa12.3□□□□□ -0.44
PERM1-203ENST00000479361 H0Y9P7 68 aa12.29□□□□□ -0.44
PERM1-203ENST00000479361 CYP4F30PQ9H0H9 118 aa12.28□□□□□ -0.44
PERM1-203ENST00000479361 MT-ATP8P03928 68 aa12.26□□□□□ -0.45
PERM1-203ENST00000479361 OCR1Q9BZK8 76 aa12.26□□□□□ -0.45
PERM1-203ENST00000479361 SCGB1A1P11684 91 aa12.25□□□□□ -0.45
PERM1-203ENST00000479361 MP68P56378 58 aa12.18□□□□□ -0.46
PERM1-203ENST00000479361 C1orf64Q8NEQ6 169 aa12.17□□□□□ -0.46
PERM1-203ENST00000479361 C5orf47Q569G3 176 aa12.16□□□□□ -0.46
PERM1-203ENST00000479361 KRTAP9-2Q9BYQ4 174 aa12.16□□□□□ -0.46
PERM1-203ENST00000479361 LINC00208Q96KT6 92 aa12.14□□□□□ -0.47
PERM1-203ENST00000479361 LCE2DQ5TA82 110 aaPredicted RBP12.11□□□□□ -0.47
PERM1-203ENST00000479361 KRTAP9-8Q9BYQ0 159 aa12.11□□□□□ -0.47
PERM1-203ENST00000479361 KRTAP3-1Q9BYR8 98 aa12.1□□□□□ -0.47
PERM1-203ENST00000479361 FAM236AA0A1B0GUQ0 79 aa12.07□□□□□ -0.48
PERM1-203ENST00000479361 FAM236BA0A1B0GV22 79 aa12.07□□□□□ -0.48
PERM1-203ENST00000479361 H3BPC8 53 aa12.07□□□□□ -0.48
PERM1-203ENST00000479361 SMIM20Q8N5G0 67 aa12.04□□□□□ -0.48
PERM1-203ENST00000479361 MT2AP02795 61 aa11.99□□□□□ -0.49
PERM1-203ENST00000479361 S4R3F8 94 aa11.99□□□□□ -0.49
PERM1-203ENST00000479361 TRAV7A0A075B6U4 112 aa11.96□□□□□ -0.49
PERM1-203ENST00000479361 KLKP1Q107X0 134 aa11.96□□□□□ -0.49
PERM1-203ENST00000479361 KRTAP10-10P60014 251 aa11.91□□□□□ -0.5
PERM1-203ENST00000479361 A8MUN3 132 aa11.89□□□□□ -0.51
PERM1-203ENST00000479361 MT1FP04733 61 aa11.89□□□□□ -0.51
PERM1-203ENST00000479361 LCA10Q71F78 164 aa11.89□□□□□ -0.51
PERM1-203ENST00000479361 CSAG1Q6PB30 78 aa11.86□□□□□ -0.51
PERM1-203ENST00000479361 SERP2Q8N6R1 65 aa11.74□□□□□ -0.53
PERM1-203ENST00000479361 KRTAP3-3Q9BYR6 98 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms