RNA–Protein interactions for RNA: ENST00000478716.1

RBMS3-213, Transcript of RNA binding motif single stranded interacting protein 3, human

TSL 4

Gene RBMS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBMS3-213	ENST00000478716	CELSR1	Q9NYQ6	3014 aa		1.01	□□□□□ -2.25
RBMS3-213	ENST00000478716	STATH	P02808	62 aa		1.01	□□□□□ -2.25
RBMS3-213	ENST00000478716	TNRC18	O15417	2968 aa	Predicted RBP	1.01	□□□□□ -2.25
RBMS3-213	ENST00000478716	ATR	Q13535	2644 aa		1.01	□□□□□ -2.25
RBMS3-213	ENST00000478716	PIEZO1	Q92508	2521 aa		1	□□□□□ -2.25
RBMS3-213	ENST00000478716	BDP1	A6H8Y1	2624 aa		1	□□□□□ -2.25
RBMS3-213	ENST00000478716	SPART-AS1	P0CW21	52 aa		1	□□□□□ -2.25
RBMS3-213	ENST00000478716	HTN1	P15515	57 aa		1	□□□□□ -2.25
RBMS3-213	ENST00000478716	NCOR1	O75376	2440 aa		0.99	□□□□□ -2.25
RBMS3-213	ENST00000478716	EP300	Q09472	2414 aa	Predicted RBP	0.99	□□□□□ -2.25
RBMS3-213	ENST00000478716	CEP250	Q9BV73	2442 aa		0.99	□□□□□ -2.25
RBMS3-213	ENST00000478716	SPINK6	Q6UWN8	80 aa		0.99	□□□□□ -2.25
RBMS3-213	ENST00000478716	APC2	O95996	2303 aa		0.99	□□□□□ -2.25
RBMS3-213	ENST00000478716	ITPR3	Q14573	2671 aa		0.99	□□□□□ -2.25
RBMS3-213	ENST00000478716	FRY	Q5TBA9	3013 aa		0.98	□□□□□ -2.25
RBMS3-213	ENST00000478716	USP9Y	O00507	2555 aa	Predicted RBP	0.98	□□□□□ -2.25
RBMS3-213	ENST00000478716		H3BNG1	76 aa		0.97	□□□□□ -2.25
RBMS3-213	ENST00000478716	EPG5	Q9HCE0	2579 aa		0.97	□□□□□ -2.25
RBMS3-213	ENST00000478716	DEFB1	P60022	68 aa		0.96	□□□□□ -2.26
RBMS3-213	ENST00000478716	RPS29	P62273	56 aa	Known RBP	0.96	□□□□□ -2.26
RBMS3-213	ENST00000478716	CACNA1A	O00555	2505 aa		0.96	□□□□□ -2.26
RBMS3-213	ENST00000478716	FLNC	Q14315	2725 aa		0.96	□□□□□ -2.26
RBMS3-213	ENST00000478716	NBAS	A2RRP1	2371 aa		0.96	□□□□□ -2.26
RBMS3-213	ENST00000478716	FRYL	O94915	3013 aa		0.95	□□□□□ -2.26
RBMS3-213	ENST00000478716	MUC16	Q8WXI7	14507 aa		0.95	□□□□□ -2.26
RBMS3-213	ENST00000478716	DEFB108B	Q8NET1	73 aa		0.94	□□□□□ -2.26
RBMS3-213	ENST00000478716	PDZD2	O15018	2839 aa		0.94	□□□□□ -2.26
RBMS3-213	ENST00000478716	NIPBL	Q6KC79	2804 aa	eCLIP	0.94	□□□□□ -2.26
RBMS3-213	ENST00000478716	LRRK2	Q5S007	2527 aa		0.93	□□□□□ -2.26
RBMS3-213	ENST00000478716	NOTCH1	P46531	2555 aa		0.93	□□□□□ -2.26
RBMS3-213	ENST00000478716	DEFB136	Q30KP8	78 aa		0.93	□□□□□ -2.26
RBMS3-213	ENST00000478716	LINC01556	Q5JQF7	62 aa		0.93	□□□□□ -2.26
RBMS3-213	ENST00000478716	MAP1A	P78559	2803 aa	Predicted RBP	0.93	□□□□□ -2.26
RBMS3-213	ENST00000478716	GCN1	Q92616	2671 aa	Known RBP	0.93	□□□□□ -2.26
RBMS3-213	ENST00000478716	FAM186A	A6NE01	2351 aa		0.93	□□□□□ -2.26
RBMS3-213	ENST00000478716	NBEA	Q8NFP9	2946 aa		0.93	□□□□□ -2.26
RBMS3-213	ENST00000478716	HIVEP3	Q5T1R4	2406 aa		0.93	□□□□□ -2.26
RBMS3-213	ENST00000478716	CSMD3	Q7Z407	3707 aa		0.92	□□□□□ -2.26
RBMS3-213	ENST00000478716		A0A096LNI7	61 aa		0.92	□□□□□ -2.26
RBMS3-213	ENST00000478716	KRTAP2-3	P0C7H8	128 aa		0.92	□□□□□ -2.26
RBMS3-213	ENST00000478716	DEFB110	Q30KQ9	67 aa		0.92	□□□□□ -2.26
RBMS3-213	ENST00000478716	KRTAP2-4	Q9BYR9	128 aa		0.92	□□□□□ -2.26
RBMS3-213	ENST00000478716	KRTAP2-1	Q9BYU5	128 aa		0.92	□□□□□ -2.26
RBMS3-213	ENST00000478716	NF1	P21359	2839 aa		0.92	□□□□□ -2.26
RBMS3-213	ENST00000478716	NSD1	Q96L73	2696 aa	Predicted RBP	0.92	□□□□□ -2.26
RBMS3-213	ENST00000478716	PRKDC	P78527	4128 aa	Known RBP	0.91	□□□□□ -2.26
RBMS3-213	ENST00000478716	UTP20	O75691	2785 aa	Known RBP	0.91	□□□□□ -2.26
RBMS3-213	ENST00000478716		U3KQA8	63 aa		0.91	□□□□□ -2.26
RBMS3-213	ENST00000478716	DMBT1	Q9UGM3	2413 aa	Predicted RBP	0.91	□□□□□ -2.26
RBMS3-213	ENST00000478716	RANBP2	P49792	3224 aa	Known RBP	0.91	□□□□□ -2.26
RBMS3-213	ENST00000478716	FBN2	P35556	2912 aa		0.91	□□□□□ -2.26
RBMS3-213	ENST00000478716	PTPN13	Q12923	2485 aa		0.9	□□□□□ -2.27
RBMS3-213	ENST00000478716	RIF1	Q5UIP0	2472 aa	Known RBP	0.9	□□□□□ -2.27
RBMS3-213	ENST00000478716	CHD8	Q9HCK8	2581 aa		0.9	□□□□□ -2.27
RBMS3-213	ENST00000478716	LRBA	P50851	2863 aa		0.9	□□□□□ -2.27
RBMS3-213	ENST00000478716	SMR3A	Q99954	134 aa		0.9	□□□□□ -2.27
RBMS3-213	ENST00000478716	MTOR	P42345	2549 aa		0.9	□□□□□ -2.27
RBMS3-213	ENST00000478716	VPS13B	Q7Z7G8	4022 aa		0.9	□□□□□ -2.27
RBMS3-213	ENST00000478716	ZZEF1	O43149	2961 aa		0.9	□□□□□ -2.27
RBMS3-213	ENST00000478716	CEP350	Q5VT06	3117 aa		0.89	□□□□□ -2.27
RBMS3-213	ENST00000478716	ZNF469	Q96JG9	3925 aa	Predicted RBP	0.89	□□□□□ -2.27
RBMS3-213	ENST00000478716	AKAP9	Q99996	3911 aa		0.89	□□□□□ -2.27
RBMS3-213	ENST00000478716	DNAH11	Q96DT5	4516 aa		0.89	□□□□□ -2.27
RBMS3-213	ENST00000478716	DEFB133	Q30KQ1	61 aa		0.89	□□□□□ -2.27
RBMS3-213	ENST00000478716	CFAP54	Q96N23	3096 aa		0.89	□□□□□ -2.27
RBMS3-213	ENST00000478716	ANKRD11	Q6UB99	2663 aa	Predicted RBP	0.88	□□□□□ -2.27
RBMS3-213	ENST00000478716	NBPF19	A0A087WUL8	3843 aa		0.88	□□□□□ -2.27
RBMS3-213	ENST00000478716	TACC2	O95359	2948 aa		0.88	□□□□□ -2.27
RBMS3-213	ENST00000478716	ANK2	Q01484	3957 aa		0.88	□□□□□ -2.27
RBMS3-213	ENST00000478716	ANKHD1	Q8IWZ3	2542 aa	Known RBP	0.87	□□□□□ -2.27
RBMS3-213	ENST00000478716	ITPR1	Q14643	2758 aa		0.87	□□□□□ -2.27
RBMS3-213	ENST00000478716	DCHS2	Q6V1P9	2916 aa		0.87	□□□□□ -2.27
RBMS3-213	ENST00000478716	PRUNE2	Q8WUY3	3088 aa		0.87	□□□□□ -2.27
RBMS3-213	ENST00000478716	CD52	P31358	61 aa		0.87	□□□□□ -2.27
RBMS3-213	ENST00000478716	KRTAP8-1	Q8IUC2	63 aa		0.87	□□□□□ -2.27
RBMS3-213	ENST00000478716	VPS13D	Q5THJ4	4388 aa		0.87	□□□□□ -2.27
RBMS3-213	ENST00000478716	SETX	Q7Z333	2677 aa	Known RBP	0.87	□□□□□ -2.27
RBMS3-213	ENST00000478716	COL7A1	Q02388	2944 aa		0.87	□□□□□ -2.27
RBMS3-213	ENST00000478716	COL12A1	Q99715	3063 aa		0.87	□□□□□ -2.27
RBMS3-213	ENST00000478716	SACS	Q9NZJ4	4579 aa		0.86	□□□□□ -2.27
RBMS3-213	ENST00000478716	DNAH3	Q8TD57	4116 aa		0.86	□□□□□ -2.27
RBMS3-213	ENST00000478716	TRIO	O75962	3097 aa		0.86	□□□□□ -2.27
RBMS3-213	ENST00000478716	TNXB	P22105	4242 aa		0.86	□□□□□ -2.27
RBMS3-213	ENST00000478716	COL6A3	P12111	3177 aa		0.86	□□□□□ -2.27
RBMS3-213	ENST00000478716	DNAH12	Q6ZR08	3092 aa		0.85	□□□□□ -2.27
RBMS3-213	ENST00000478716	KMT2A	Q03164	3969 aa		0.85	□□□□□ -2.27
RBMS3-213	ENST00000478716	HIVEP1	P15822	2718 aa		0.85	□□□□□ -2.27
RBMS3-213	ENST00000478716	CFAP46	Q8IYW2	2715 aa		0.85	□□□□□ -2.27
RBMS3-213	ENST00000478716	KRTAP19-3	Q7Z4W3	81 aa		0.85	□□□□□ -2.27
RBMS3-213	ENST00000478716	UNC79	Q9P2D8	2635 aa		0.85	□□□□□ -2.27
RBMS3-213	ENST00000478716		A0A096LPF7	62 aa		0.84	□□□□□ -2.27
RBMS3-213	ENST00000478716	DMXL2	Q8TDJ6	3036 aa		0.84	□□□□□ -2.28
RBMS3-213	ENST00000478716	ZFHX4	Q86UP3	3567 aa		0.84	□□□□□ -2.28
RBMS3-213	ENST00000478716	BOD1L1	Q8NFC6	3051 aa		0.84	□□□□□ -2.28
RBMS3-213	ENST00000478716	LYST	Q99698	3801 aa		0.84	□□□□□ -2.28
RBMS3-213	ENST00000478716	FLG	P20930	4061 aa	Predicted RBP	0.84	□□□□□ -2.28
RBMS3-213	ENST00000478716	PKD1L1	Q8TDX9	2849 aa		0.83	□□□□□ -2.28
RBMS3-213	ENST00000478716	USP9X	Q93008	2570 aa	Predicted RBP	0.83	□□□□□ -2.28
RBMS3-213	ENST00000478716	ACAN	P16112	2415 aa		0.83	□□□□□ -2.28
RBMS3-213	ENST00000478716	SPG11	Q96JI7	2443 aa		0.83	□□□□□ -2.28

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