RNA–Protein interactions for RNA: ENST00000478716.1

RBMS3-213, Transcript of RNA binding motif single stranded interacting protein 3, humanhuman

TSL 4

Gene RBMS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBMS3-213ENST00000478716 AEBP2Q6ZN18 517 aaPredicted RBP25.91■■□□□ 1.74
RBMS3-213ENST00000478716 CHIC1Q5VXU3 224 aa25.49■■□□□ 1.67
RBMS3-213ENST00000478716 PHF23Q9BUL5 403 aaPredicted RBP22.45■■□□□ 1.18
RBMS3-213ENST00000478716 SENP3Q9H4L4 574 aaPredicted RBP21.95■■□□□ 1.1
RBMS3-213ENST00000478716 PLPPR3Q6T4P5 718 aa20.78■□□□□ 0.92
RBMS3-213ENST00000478716 FOXD1Q16676 465 aa20.36■□□□□ 0.85
RBMS3-213ENST00000478716 ADRA2BP18089 450 aa19.76■□□□□ 0.75
RBMS3-213ENST00000478716 PPP6R1Q9UPN7 881 aa19.75■□□□□ 0.75
RBMS3-213ENST00000478716 PIAS4Q8N2W9 510 aaPredicted RBP19.26■□□□□ 0.67
RBMS3-213ENST00000478716 MSH5O43196 834 aa18.69■□□□□ 0.58
RBMS3-213ENST00000478716 PPP4R3CPQ6ZMV5 832 aa18.35■□□□□ 0.53
RBMS3-213ENST00000478716 KCNA4P22459 653 aa18.15■□□□□ 0.5
RBMS3-213ENST00000478716 SCAF1Q9H7N4 1312 aaKnown RBP18.05■□□□□ 0.48
RBMS3-213ENST00000478716 NCBP3Q53F19 620 aaKnown RBP17.93■□□□□ 0.46
RBMS3-213ENST00000478716 MAPK8IP2Q13387 824 aaPredicted RBP17.87■□□□□ 0.45
RBMS3-213ENST00000478716 CNKSR2Q8WXI2 1034 aa17.79■□□□□ 0.44
RBMS3-213ENST00000478716 NPM3O75607 178 aaKnown RBP17.66■□□□□ 0.42
RBMS3-213ENST00000478716 DMRT2Q9Y5R5 561 aa17.55■□□□□ 0.4
RBMS3-213ENST00000478716 RNF216Q9NWF9 866 aaPredicted RBP17.39■□□□□ 0.37
RBMS3-213ENST00000478716 SLC4A1APQ9BWU0 796 aaKnown RBP17.33■□□□□ 0.36
RBMS3-213ENST00000478716 HOXD11P31277 338 aaPredicted RBP17.26■□□□□ 0.35
RBMS3-213ENST00000478716 EHMT2Q96KQ7 1210 aa17.08■□□□□ 0.32
RBMS3-213ENST00000478716 DNAJC5BQ9UF47 199 aa17.07■□□□□ 0.32
RBMS3-213ENST00000478716 POTEDQ86YR6 584 aa16.83■□□□□ 0.28
RBMS3-213ENST00000478716 DCAF8L1A6NGE4 600 aa16.82■□□□□ 0.28
RBMS3-213ENST00000478716 CSRNP3Q8WYN3 585 aa16.76■□□□□ 0.27
RBMS3-213ENST00000478716 ZBTB22O15209 634 aa16.71■□□□□ 0.27
RBMS3-213ENST00000478716 FOXD4L1Q9NU39 408 aa16.64■□□□□ 0.25
RBMS3-213ENST00000478716 SLC4A2P04920 1241 aa16.63■□□□□ 0.25
RBMS3-213ENST00000478716 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.48■□□□□ 0.23
RBMS3-213ENST00000478716 MYCNP04198 464 aaPredicted RBP16.31■□□□□ 0.2
RBMS3-213ENST00000478716 U3KPZ7 1027 aaPredicted RBP16.22■□□□□ 0.19
RBMS3-213ENST00000478716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.07■□□□□ 0.16
RBMS3-213ENST00000478716 HNRNPUL2Q1KMD3 747 aaKnown RBP16.07■□□□□ 0.16
RBMS3-213ENST00000478716 ATXN8OSP0DMR3 200 aa16.03■□□□□ 0.16
RBMS3-213ENST00000478716 SAMD1Q6SPF0 538 aaPredicted RBP16.03■□□□□ 0.16
RBMS3-213ENST00000478716 RNF39Q9H2S5 420 aa16.03■□□□□ 0.16
RBMS3-213ENST00000478716 ATF5Q9Y2D1 282 aaPredicted RBP15.88■□□□□ 0.13
RBMS3-213ENST00000478716 APLP2Q06481 763 aa15.86■□□□□ 0.13
RBMS3-213ENST00000478716 C1QBPQ07021 282 aaKnown RBP15.85■□□□□ 0.13
RBMS3-213ENST00000478716 SPINK5Q9NQ38 1064 aaPredicted RBP15.72■□□□□ 0.11
RBMS3-213ENST00000478716 CAPN15O75808 1086 aa15.66■□□□□ 0.1
RBMS3-213ENST00000478716 TRHP20396 242 aaPredicted RBP15.63■□□□□ 0.09
RBMS3-213ENST00000478716 ZNF219Q9P2Y4 722 aaPredicted RBP15.62■□□□□ 0.09
RBMS3-213ENST00000478716 CACNB1Q02641 598 aaPredicted RBP15.49■□□□□ 0.07
RBMS3-213ENST00000478716 POLA2Q14181 598 aa15.42■□□□□ 0.06
RBMS3-213ENST00000478716 ABCB7O75027 752 aa15.39■□□□□ 0.05
RBMS3-213ENST00000478716 DSG3P32926 999 aa15.33■□□□□ 0.04
RBMS3-213ENST00000478716 FBLN2P98095 1184 aa15.2■□□□□ 0.02
RBMS3-213ENST00000478716 MKRN4PQ13434 485 aaPredicted RBP15.19■□□□□ 0.02
RBMS3-213ENST00000478716 FKBP8Q14318 412 aa15.16■□□□□ 0.02
RBMS3-213ENST00000478716 ZBTB12Q9Y330 459 aaPredicted RBP15.15■□□□□ 0.02
RBMS3-213ENST00000478716 SPDYE4A6NLX3 237 aa14.95□□□□□ -0.02
RBMS3-213ENST00000478716 OSCARQ8IYS5 282 aa14.88□□□□□ -0.03
RBMS3-213ENST00000478716 SPDYE2BA6NHP3 402 aa14.76□□□□□ -0.05
RBMS3-213ENST00000478716 SPDYE6P0CI01 402 aa14.76□□□□□ -0.05
RBMS3-213ENST00000478716 SPDYE2Q495Y8 402 aa14.76□□□□□ -0.05
RBMS3-213ENST00000478716 ZNF692Q9BU19 519 aaPredicted RBP14.76□□□□□ -0.05
RBMS3-213ENST00000478716 PROM2Q8N271 834 aa14.7□□□□□ -0.06
RBMS3-213ENST00000478716 SSUH2Q9Y2M2 353 aa14.66□□□□□ -0.06
RBMS3-213ENST00000478716 RBM42Q9BTD8 480 aaKnown RBP14.59□□□□□ -0.07
RBMS3-213ENST00000478716 PABPN1Q86U42 306 aaKnown RBP eCLIP14.57□□□□□ -0.08
RBMS3-213ENST00000478716 FBXO3Q9UK99 471 aa14.55□□□□□ -0.08
RBMS3-213ENST00000478716 AKT1S1Q96B36 256 aa14.46□□□□□ -0.09
RBMS3-213ENST00000478716 VASPP50552 380 aaPredicted RBP14.35□□□□□ -0.11
RBMS3-213ENST00000478716 STAG3Q9UJ98 1225 aa14.35□□□□□ -0.11
RBMS3-213ENST00000478716 REM2Q8IYK8 340 aaPredicted RBP14.33□□□□□ -0.12
RBMS3-213ENST00000478716 SPDYE1Q8NFV5 336 aaPredicted RBP14.29□□□□□ -0.12
RBMS3-213ENST00000478716 CLEC11AQ9Y240 323 aa14.24□□□□□ -0.13
RBMS3-213ENST00000478716 IFNLR1Q8IU57 520 aaPredicted RBP14.18□□□□□ -0.14
RBMS3-213ENST00000478716 PITPNM1O00562 1244 aa14.17□□□□□ -0.14
RBMS3-213ENST00000478716 MIER1Q8N108 512 aa14.17□□□□□ -0.14
RBMS3-213ENST00000478716 PLCD3Q8N3E9 789 aa14.17□□□□□ -0.14
RBMS3-213ENST00000478716 AMER1Q5JTC6 1135 aaPredicted RBP14.14□□□□□ -0.15
RBMS3-213ENST00000478716 PRR29P0C7W0 189 aa14.13□□□□□ -0.15
RBMS3-213ENST00000478716 RTN4Q9NQC3 1192 aaKnown RBP14.12□□□□□ -0.15
RBMS3-213ENST00000478716 KLHL34Q8N239 644 aa14.09□□□□□ -0.15
RBMS3-213ENST00000478716 PLEKHG5O94827 1062 aa14.07□□□□□ -0.16
RBMS3-213ENST00000478716 CREBZFQ9NS37 354 aa13.99□□□□□ -0.17
RBMS3-213ENST00000478716 SPOCK2Q92563 424 aa13.98□□□□□ -0.17
RBMS3-213ENST00000478716 ZBTB47Q9UFB7 747 aaPredicted RBP13.98□□□□□ -0.17
RBMS3-213ENST00000478716 CHRDL2Q6WN34 429 aa13.92□□□□□ -0.18
RBMS3-213ENST00000478716 CHADLQ6NUI6 762 aa13.87□□□□□ -0.19
RBMS3-213ENST00000478716 MNX1P50219 401 aaPredicted RBP13.85□□□□□ -0.19
RBMS3-213ENST00000478716 FXR2P51116 673 aaKnown RBP eCLIP13.85□□□□□ -0.19
RBMS3-213ENST00000478716 PRKAR2AP13861 404 aaKnown RBP13.82□□□□□ -0.2
RBMS3-213ENST00000478716 PIP4P2Q8N4L2 257 aa13.8□□□□□ -0.2
RBMS3-213ENST00000478716 PKD2Q13563 968 aa13.77□□□□□ -0.21
RBMS3-213ENST00000478716 NPM1P06748 294 aaKnown RBP eCLIP13.76□□□□□ -0.21
RBMS3-213ENST00000478716 NUBP1P53384 320 aa13.76□□□□□ -0.21
RBMS3-213ENST00000478716 CIZ1Q9ULV3 898 aaPredicted RBP13.75□□□□□ -0.21
RBMS3-213ENST00000478716 FARP1Q9Y4F1 1045 aaPredicted RBP13.75□□□□□ -0.21
RBMS3-213ENST00000478716 DCAF8Q5TAQ9 597 aa13.68□□□□□ -0.22
RBMS3-213ENST00000478716 RASEFQ8IZ41 740 aa13.68□□□□□ -0.22
RBMS3-213ENST00000478716 ECM2O94769 699 aaPredicted RBP13.67□□□□□ -0.22
RBMS3-213ENST00000478716 GSE1Q14687 1217 aa13.67□□□□□ -0.22
RBMS3-213ENST00000478716 FAM212AQ96EL1 285 aa13.66□□□□□ -0.22
RBMS3-213ENST00000478716 TRIM41Q8WV44 630 aa13.57□□□□□ -0.24
RBMS3-213ENST00000478716 TSPYL2Q9H2G4 693 aaPredicted RBP13.56□□□□□ -0.24
RBMS3-213ENST00000478716 DCAF8L2P0C7V8 631 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms