RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 IGHV6-1A0A0B4J1U7 121 aa7.31□□□□□ -1.24
SMARCE1-209ENST00000478349 KRTAP19-4Q3LI73 84 aa7.31□□□□□ -1.24
SMARCE1-209ENST00000478349 KRTAP4-9Q9BYQ8 210 aa7.31□□□□□ -1.24
SMARCE1-209ENST00000478349 KRTAP16-1A8MUX0 517 aa7.3□□□□□ -1.24
SMARCE1-209ENST00000478349 C8orf87E5RJ46 101 aa7.3□□□□□ -1.24
SMARCE1-209ENST00000478349 LCE4AQ5TA78 99 aa7.3□□□□□ -1.24
SMARCE1-209ENST00000478349 MTURNQ8N3F0 131 aa7.3□□□□□ -1.24
SMARCE1-209ENST00000478349 K7ERJ3 54 aa7.29□□□□□ -1.24
SMARCE1-209ENST00000478349 LINC00472Q9H8W2 130 aa7.29□□□□□ -1.24
SMARCE1-209ENST00000478349 DSCR8Q96T75 97 aa7.28□□□□□ -1.24
SMARCE1-209ENST00000478349 VPS25Q9BRG1 176 aa7.28□□□□□ -1.24
SMARCE1-209ENST00000478349 RBM3P98179 157 aaKnown RBP7.27□□□□□ -1.25
SMARCE1-209ENST00000478349 DEFB116Q30KQ4 102 aa7.27□□□□□ -1.25
SMARCE1-209ENST00000478349 KRTAP9-8Q9BYQ0 159 aa7.27□□□□□ -1.25
SMARCE1-209ENST00000478349 J3KT08 172 aa7.26□□□□□ -1.25
SMARCE1-209ENST00000478349 SCGB1C2P0DMR2 95 aa7.26□□□□□ -1.25
SMARCE1-209ENST00000478349 A0A1B0GVX0 72 aa7.25□□□□□ -1.25
SMARCE1-209ENST00000478349 UQCR10Q9UDW1 63 aa7.25□□□□□ -1.25
SMARCE1-209ENST00000478349 H3BS24 57 aa7.24□□□□□ -1.25
SMARCE1-209ENST00000478349 HRES1P13985 223 aa7.23□□□□□ -1.25
SMARCE1-209ENST00000478349 NOTCH2NLQ7Z3S9 236 aa7.23□□□□□ -1.25
SMARCE1-209ENST00000478349 MPLKIPQ8TAP9 179 aa7.23□□□□□ -1.25
SMARCE1-209ENST00000478349 NDUFB1O75438 58 aa7.22□□□□□ -1.25
SMARCE1-209ENST00000478349 PYY3Q5JQD4 70 aa7.22□□□□□ -1.25
SMARCE1-209ENST00000478349 C9JAW5 83 aa7.21□□□□□ -1.26
SMARCE1-209ENST00000478349 ZCCHC13Q8WW36 166 aaKnown RBP7.19□□□□□ -1.26
SMARCE1-209ENST00000478349 MT2AP02795 61 aa7.18□□□□□ -1.26
SMARCE1-209ENST00000478349 A0A1B0GW54 56 aa7.16□□□□□ -1.26
SMARCE1-209ENST00000478349 BAALC-AS2P0C853 105 aa7.16□□□□□ -1.26
SMARCE1-209ENST00000478349 LYRM7Q5U5X0 104 aa7.16□□□□□ -1.26
SMARCE1-209ENST00000478349 JMJD7-PLA2G4BH0Y9G9 81 aa7.15□□□□□ -1.26
SMARCE1-209ENST00000478349 KRTAP10-10P60014 251 aa7.15□□□□□ -1.26
SMARCE1-209ENST00000478349 Q6ZQT0 140 aa7.15□□□□□ -1.26
SMARCE1-209ENST00000478349 KRTAP9-7A8MTY7 169 aa7.14□□□□□ -1.27
SMARCE1-209ENST00000478349 PDE6GP18545 87 aa7.14□□□□□ -1.27
SMARCE1-209ENST00000478349 SPINK7P58062 85 aa7.14□□□□□ -1.27
SMARCE1-209ENST00000478349 KRTAP4-2Q9BYR5 136 aa7.13□□□□□ -1.27
SMARCE1-209ENST00000478349 ATXN8Q156A1 80 aa7.12□□□□□ -1.27
SMARCE1-209ENST00000478349 A8MWP4 228 aa7.11□□□□□ -1.27
SMARCE1-209ENST00000478349 M0R143 59 aa7.11□□□□□ -1.27
SMARCE1-209ENST00000478349 MT1FP04733 61 aa7.11□□□□□ -1.27
SMARCE1-209ENST00000478349 Q8N9P0 234 aaPredicted RBP7.11□□□□□ -1.27
SMARCE1-209ENST00000478349 USH2AO75445 5202 aa7.1□□□□□ -1.27
SMARCE1-209ENST00000478349 LOC110117498A0A087WWA1 95 aa7.09□□□□□ -1.27
SMARCE1-209ENST00000478349 LINC00846Q9NV44 126 aa7.09□□□□□ -1.27
SMARCE1-209ENST00000478349 C8orf17Q9NRJ1 99 aa7.08□□□□□ -1.28
SMARCE1-209ENST00000478349 WFDC13Q8IUB5 93 aa7.07□□□□□ -1.28
SMARCE1-209ENST00000478349 TMA7Q9Y2S6 64 aaKnown RBP7.06□□□□□ -1.28
SMARCE1-209ENST00000478349 Q6ZVQ6 151 aa7.05□□□□□ -1.28
SMARCE1-209ENST00000478349 KRTAP9-3Q9BYQ3 159 aa7.05□□□□□ -1.28
SMARCE1-209ENST00000478349 KRTAP4-11Q9BYQ6 195 aa7.05□□□□□ -1.28
SMARCE1-209ENST00000478349 SSPOA2VEC9 5147 aa7.02□□□□□ -1.29
SMARCE1-209ENST00000478349 IGKV3D-7A0A0C4DH55 119 aa7.02□□□□□ -1.29
SMARCE1-209ENST00000478349 NREPQ16612 68 aa7.02□□□□□ -1.29
SMARCE1-209ENST00000478349 PRR15Q8IV56 129 aa7.01□□□□□ -1.29
SMARCE1-209ENST00000478349 C14orf132Q9NPU4 83 aa7.01□□□□□ -1.29
SMARCE1-209ENST00000478349 TMEM254Q8TBM7 123 aa6.99□□□□□ -1.29
SMARCE1-209ENST00000478349 MRPL34Q9BQ48 92 aaKnown RBP6.98□□□□□ -1.29
SMARCE1-209ENST00000478349 FCGBPQ9Y6R7 5405 aaPredicted RBP6.98□□□□□ -1.29
SMARCE1-209ENST00000478349 LCE5AQ5TCM9 118 aa6.97□□□□□ -1.29
SMARCE1-209ENST00000478349 NAA38Q9BRA0 125 aaKnown RBP6.97□□□□□ -1.29
SMARCE1-209ENST00000478349 NDUFS5O43920 106 aa6.95□□□□□ -1.3
SMARCE1-209ENST00000478349 MMP24-AS1A0A0U1RRL7 71 aa6.94□□□□□ -1.3
SMARCE1-209ENST00000478349 hDV103S1A0JD37 113 aa6.94□□□□□ -1.3
SMARCE1-209ENST00000478349 H1FX-AS1Q4G0G2 97 aa6.92□□□□□ -1.3
SMARCE1-209ENST00000478349 H3BT86 120 aa6.9□□□□□ -1.3
SMARCE1-209ENST00000478349 SMIM6P0DI80 62 aa6.9□□□□□ -1.3
SMARCE1-209ENST00000478349 K7EQZ3 153 aa6.89□□□□□ -1.31
SMARCE1-209ENST00000478349 BPY2O14599 106 aa6.89□□□□□ -1.31
SMARCE1-209ENST00000478349 C7orf65Q6ZTY9 151 aa6.89□□□□□ -1.31
SMARCE1-209ENST00000478349 TSTD3H0UI37 97 aa6.88□□□□□ -1.31
SMARCE1-209ENST00000478349 KRTAP19-6Q3LI70 58 aa6.88□□□□□ -1.31
SMARCE1-209ENST00000478349 IGKV2D-30A0A075B6S6 120 aa6.86□□□□□ -1.31
SMARCE1-209ENST00000478349 IGKV2-30P06310 120 aa6.86□□□□□ -1.31
SMARCE1-209ENST00000478349 BATFQ16520 125 aa6.86□□□□□ -1.31
SMARCE1-209ENST00000478349 MACF1Q9UPN3 7388 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-209ENST00000478349 CASC2Q6XLA1 102 aa6.81□□□□□ -1.32
SMARCE1-209ENST00000478349 C9orf118A6NHY6 69 aa6.8□□□□□ -1.32
SMARCE1-209ENST00000478349 A0A1W2PPM0 123 aa6.79□□□□□ -1.32
SMARCE1-209ENST00000478349 CXCL6P80162 114 aa6.79□□□□□ -1.32
SMARCE1-209ENST00000478349 HCG22E2RYF7 251 aa6.77□□□□□ -1.33
SMARCE1-209ENST00000478349 Q5W150 140 aa6.75□□□□□ -1.33
SMARCE1-209ENST00000478349 SYNE2Q8WXH0 6885 aaKnown RBP6.75□□□□□ -1.33
SMARCE1-209ENST00000478349 Q8N9L7 120 aa6.73□□□□□ -1.33
SMARCE1-209ENST00000478349 UBL5Q9BZL1 73 aa6.73□□□□□ -1.33
SMARCE1-209ENST00000478349 TAX1BP3O14907 124 aa6.72□□□□□ -1.33
SMARCE1-209ENST00000478349 C4orf26Q17RF5 130 aa6.72□□□□□ -1.33
SMARCE1-209ENST00000478349 FAM236AA0A1B0GUQ0 79 aa6.7□□□□□ -1.34
SMARCE1-209ENST00000478349 FAM236BA0A1B0GV22 79 aa6.7□□□□□ -1.34
SMARCE1-209ENST00000478349 SPCS1Q9Y6A9 102 aa6.7□□□□□ -1.34
SMARCE1-209ENST00000478349 C5orf47Q569G3 176 aa6.66□□□□□ -1.34
SMARCE1-209ENST00000478349 S4R3F8 94 aa6.66□□□□□ -1.34
SMARCE1-209ENST00000478349 KRTAP6-3Q3LI67 103 aa6.65□□□□□ -1.34
SMARCE1-209ENST00000478349 CSAG1Q6PB30 78 aa6.65□□□□□ -1.34
SMARCE1-209ENST00000478349 TP53AIP1Q9HCN2 124 aa6.63□□□□□ -1.35
SMARCE1-209ENST00000478349 C1orf64Q8NEQ6 169 aa6.61□□□□□ -1.35
SMARCE1-209ENST00000478349 Q5VV11 94 aa6.59□□□□□ -1.35
SMARCE1-209ENST00000478349 A6NN06 94 aa6.57□□□□□ -1.36
SMARCE1-209ENST00000478349 COL5A1-AS1Q5SY13 56 aa6.57□□□□□ -1.36
SMARCE1-209ENST00000478349 LCA10Q71F78 164 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms