RNA–Protein interactions for RNA: ENST00000477819.1

PTPRN-214, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-214ENST00000477819 WFDC13Q8IUB5 93 aa3.34□□□□□ -1.87
PTPRN-214ENST00000477819 PRAC1Q96KF2 57 aa3.34□□□□□ -1.87
PTPRN-214ENST00000477819 NHP2Q9NX24 153 aaKnown RBP3.34□□□□□ -1.87
PTPRN-214ENST00000477819 ZNF815PA8K554 130 aa3.33□□□□□ -1.88
PTPRN-214ENST00000477819 PLNP26678 52 aa3.33□□□□□ -1.88
PTPRN-214ENST00000477819 SS18L2Q9UHA2 77 aa3.33□□□□□ -1.88
PTPRN-214ENST00000477819 A0A087WSZ3 146 aa3.32□□□□□ -1.88
PTPRN-214ENST00000477819 DPM2O94777 84 aa3.32□□□□□ -1.88
PTPRN-214ENST00000477819 CLLU1Q5K131 121 aa3.32□□□□□ -1.88
PTPRN-214ENST00000477819 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
PTPRN-214ENST00000477819 SMIM11BQ8TCY0 68 aa3.32□□□□□ -1.88
PTPRN-214ENST00000477819 TSTD3H0UI37 97 aa3.31□□□□□ -1.88
PTPRN-214ENST00000477819 TIMM17BO60830 172 aa3.31□□□□□ -1.88
PTPRN-214ENST00000477819 IGKCP01834 107 aa3.31□□□□□ -1.88
PTPRN-214ENST00000477819 CHCHD1Q96BP2 118 aaKnown RBP3.31□□□□□ -1.88
PTPRN-214ENST00000477819 OCR1Q9BZK8 76 aa3.31□□□□□ -1.88
PTPRN-214ENST00000477819 LINC00575Q6W349 94 aa3.3□□□□□ -1.88
PTPRN-214ENST00000477819 ZCCHC13Q8WW36 166 aaKnown RBP3.3□□□□□ -1.88
PTPRN-214ENST00000477819 PRO0628Q9UI54 55 aa3.3□□□□□ -1.88
PTPRN-214ENST00000477819 IGKV4-1P06312 121 aa3.29□□□□□ -1.88
PTPRN-214ENST00000477819 PSMB2P49721 201 aa3.29□□□□□ -1.88
PTPRN-214ENST00000477819 H1FX-AS1Q4G0G2 97 aa3.29□□□□□ -1.88
PTPRN-214ENST00000477819 SNHG12Q9BXW3 62 aa3.29□□□□□ -1.88
PTPRN-214ENST00000477819 TTTY13Q9BZ97 58 aa3.29□□□□□ -1.88
PTPRN-214ENST00000477819 IMUPQ9GZP8 106 aa3.29□□□□□ -1.88
PTPRN-214ENST00000477819 DSTQ03001 7570 aaKnown RBP3.29□□□□□ -1.88
PTPRN-214ENST00000477819 IGHV6-1A0A0B4J1U7 121 aa3.28□□□□□ -1.88
PTPRN-214ENST00000477819 hADV29S1A0JD25 119 aa3.28□□□□□ -1.88
PTPRN-214ENST00000477819 DEFB116Q30KQ4 102 aa3.28□□□□□ -1.88
PTPRN-214ENST00000477819 TEN1Q86WV5 123 aa3.28□□□□□ -1.88
PTPRN-214ENST00000477819 KRTAP8-1Q8IUC2 63 aa3.28□□□□□ -1.88
PTPRN-214ENST00000477819 SPRR2GQ9BYE4 73 aa3.28□□□□□ -1.88
PTPRN-214ENST00000477819 FAM236AA0A1B0GUQ0 79 aa3.27□□□□□ -1.89
PTPRN-214ENST00000477819 FAM236BA0A1B0GV22 79 aa3.27□□□□□ -1.89
PTPRN-214ENST00000477819 NDUFS5O43920 106 aa3.27□□□□□ -1.89
PTPRN-214ENST00000477819 LEPROTL1O95214 131 aa3.27□□□□□ -1.89
PTPRN-214ENST00000477819 HSPB8Q9UJY1 196 aa3.27□□□□□ -1.89
PTPRN-214ENST00000477819 SMIM6P0DI80 62 aa3.26□□□□□ -1.89
PTPRN-214ENST00000477819 SCGB1A1P11684 91 aa3.26□□□□□ -1.89
PTPRN-214ENST00000477819 FABP4P15090 132 aa3.26□□□□□ -1.89
PTPRN-214ENST00000477819 SMIM20Q8N5G0 67 aa3.26□□□□□ -1.89
PTPRN-214ENST00000477819 C12orf57Q99622 126 aa3.26□□□□□ -1.89
PTPRN-214ENST00000477819 TMEM218A2RU14 115 aa3.25□□□□□ -1.89
PTPRN-214ENST00000477819 SMIM26A0A096LP01 95 aa3.24□□□□□ -1.89
PTPRN-214ENST00000477819 BATFQ16520 125 aa3.24□□□□□ -1.89
PTPRN-214ENST00000477819 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.24□□□□□ -1.89
PTPRN-214ENST00000477819 MUSTN1Q8IVN3 82 aa3.24□□□□□ -1.89
PTPRN-214ENST00000477819 COA6Q5JTJ3 125 aaKnown RBP3.23□□□□□ -1.89
PTPRN-214ENST00000477819 APOC3P02656 99 aa3.22□□□□□ -1.89
PTPRN-214ENST00000477819 SVBPQ8N300 66 aa3.22□□□□□ -1.89
PTPRN-214ENST00000477819 HMCN1Q96RW7 5635 aa3.22□□□□□ -1.89
PTPRN-214ENST00000477819 PSPHP1O15172 72 aa3.21□□□□□ -1.9
PTPRN-214ENST00000477819 PMAIP1Q13794 54 aa3.21□□□□□ -1.9
PTPRN-214ENST00000477819 SCGB1D4Q6XE38 83 aa3.21□□□□□ -1.9
PTPRN-214ENST00000477819 PPDPFLQ8WWR9 84 aa3.21□□□□□ -1.9
PTPRN-214ENST00000477819 C8orf87E5RJ46 101 aa3.2□□□□□ -1.9
PTPRN-214ENST00000477819 IFITM1P13164 125 aa3.2□□□□□ -1.9
PTPRN-214ENST00000477819 LINC00472Q9H8W2 130 aa3.2□□□□□ -1.9
PTPRN-214ENST00000477819 COPS9Q8WXC6 57 aa3.19□□□□□ -1.9
PTPRN-214ENST00000477819 ANAPC13Q9BS18 74 aa3.19□□□□□ -1.9
PTPRN-214ENST00000477819 AHNAK2Q8IVF2 5795 aa3.19□□□□□ -1.9
PTPRN-214ENST00000477819 H3BMG7 143 aa3.18□□□□□ -1.9
PTPRN-214ENST00000477819 C3orf79P0CE67 100 aa3.18□□□□□ -1.9
PTPRN-214ENST00000477819 A0A1B0GVX0 72 aa3.17□□□□□ -1.9
PTPRN-214ENST00000477819 LYRM7Q5U5X0 104 aa3.17□□□□□ -1.9
PTPRN-214ENST00000477819 CXCL6P80162 114 aa3.16□□□□□ -1.9
PTPRN-214ENST00000477819 SCGB1C2P0DMR2 95 aa3.15□□□□□ -1.91
PTPRN-214ENST00000477819 S100A2P29034 98 aa3.15□□□□□ -1.91
PTPRN-214ENST00000477819 MP68P56378 58 aa3.15□□□□□ -1.91
PTPRN-214ENST00000477819 RAB37Q96AX2 223 aa3.15□□□□□ -1.91
PTPRN-214ENST00000477819 YPEL4Q96NS1 127 aa3.15□□□□□ -1.91
PTPRN-214ENST00000477819 IGKV3D-7A0A0C4DH55 119 aa3.14□□□□□ -1.91
PTPRN-214ENST00000477819 SYS1-DBNDD2H3BUS1 97 aa3.14□□□□□ -1.91
PTPRN-214ENST00000477819 ANKRD29Q8N6D5 301 aa3.14□□□□□ -1.91
PTPRN-214ENST00000477819 A0A1B0GV90 55 aa3.13□□□□□ -1.91
PTPRN-214ENST00000477819 TRGC2P03986 189 aa3.13□□□□□ -1.91
PTPRN-214ENST00000477819 MT1XP80297 61 aa3.13□□□□□ -1.91
PTPRN-214ENST00000477819 KLKP1Q107X0 134 aa3.13□□□□□ -1.91
PTPRN-214ENST00000477819 C14orf144Q96I85 54 aa3.13□□□□□ -1.91
PTPRN-214ENST00000477819 VPS25Q9BRG1 176 aa3.13□□□□□ -1.91
PTPRN-214ENST00000477819 LINC01545Q5VT33 79 aa3.12□□□□□ -1.91
PTPRN-214ENST00000477819 TRBV7-4A0A0J9YYF1 115 aa3.11□□□□□ -1.91
PTPRN-214ENST00000477819 FABP2P12104 132 aa3.11□□□□□ -1.91
PTPRN-214ENST00000477819 BVES-AS1Q5T3Y7 98 aa3.11□□□□□ -1.91
PTPRN-214ENST00000477819 KRTAP5-10Q6L8G5 202 aa3.11□□□□□ -1.91
PTPRN-214ENST00000477819 PYY3Q5JQD4 70 aa3.1□□□□□ -1.91
PTPRN-214ENST00000477819 DSCR8Q96T75 97 aa3.1□□□□□ -1.91
PTPRN-214ENST00000477819 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
PTPRN-214ENST00000477819 KRTAP12-2P59991 146 aa3.09□□□□□ -1.91
PTPRN-214ENST00000477819 RBM3P98179 157 aaKnown RBP3.09□□□□□ -1.91
PTPRN-214ENST00000477819 PRO2289Q9P1D8 64 aa3.09□□□□□ -1.91
PTPRN-214ENST00000477819 CSAG1Q6PB30 78 aa3.08□□□□□ -1.92
PTPRN-214ENST00000477819 CAMK2N1Q7Z7J9 78 aa3.08□□□□□ -1.92
PTPRN-214ENST00000477819 M0R143 59 aa3.07□□□□□ -1.92
PTPRN-214ENST00000477819 TRACP01848 142 aa3.07□□□□□ -1.92
PTPRN-214ENST00000477819 CCKP06307 115 aa3.07□□□□□ -1.92
PTPRN-214ENST00000477819 LCA10Q71F78 164 aa3.07□□□□□ -1.92
PTPRN-214ENST00000477819 HIST3H2BBQ8N257 126 aa3.07□□□□□ -1.92
PTPRN-214ENST00000477819 DLEU1O43261 78 aa3.06□□□□□ -1.92
PTPRN-214ENST00000477819 ATOH7Q8N100 152 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms