RNA–Protein interactions for RNA: ENST00000476784.5

TTC3-215, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 7,425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-215ENST00000476784 CHD6Q8TD26 2715 aa3.69□□□□□ -1.82
TTC3-215ENST00000476784 KRTAP13-2Q52LG2 175 aa3.69□□□□□ -1.82
TTC3-215ENST00000476784 Q5VV11 94 aa3.69□□□□□ -1.82
TTC3-215ENST00000476784 ZZEF1O43149 2961 aa3.68□□□□□ -1.82
TTC3-215ENST00000476784 CRYBG3Q68DQ2 2970 aa3.68□□□□□ -1.82
TTC3-215ENST00000476784 BOD1L1Q8NFC6 3051 aa3.67□□□□□ -1.82
TTC3-215ENST00000476784 IGSF10Q6WRI0 2623 aa3.67□□□□□ -1.82
TTC3-215ENST00000476784 KRTAP11-1Q8IUC1 163 aa3.66□□□□□ -1.82
TTC3-215ENST00000476784 Q6ZRN7 208 aaPredicted RBP3.66□□□□□ -1.82
TTC3-215ENST00000476784 DSPP15924 2871 aaKnown RBP3.65□□□□□ -1.83
TTC3-215ENST00000476784 KRTAP4-16G5E9R7 235 aaPredicted RBP3.64□□□□□ -1.83
TTC3-215ENST00000476784 ZNF292O60281 2723 aa3.64□□□□□ -1.83
TTC3-215ENST00000476784 ATMQ13315 3056 aa3.64□□□□□ -1.83
TTC3-215ENST00000476784 CYSTM1Q9H1C7 97 aa3.64□□□□□ -1.83
TTC3-215ENST00000476784 BSNQ9UPA5 3926 aa3.63□□□□□ -1.83
TTC3-215ENST00000476784 XP32Q5T750 250 aa3.63□□□□□ -1.83
TTC3-215ENST00000476784 SMG1Q96Q15 3661 aaKnown RBP3.62□□□□□ -1.83
TTC3-215ENST00000476784 DMXL2Q8TDJ6 3036 aa3.61□□□□□ -1.83
TTC3-215ENST00000476784 NBEAQ8NFP9 2946 aa3.6□□□□□ -1.83
TTC3-215ENST00000476784 ASB16-AS1Q495Z4 193 aa3.59□□□□□ -1.83
TTC3-215ENST00000476784 KALRNO60229 2985 aa3.58□□□□□ -1.84
TTC3-215ENST00000476784 NDUFAF8A1L188 74 aa3.58□□□□□ -1.84
TTC3-215ENST00000476784 TPRXLQ17RH7 258 aa3.58□□□□□ -1.84
TTC3-215ENST00000476784 MGAQ8IWI9 3026 aa3.56□□□□□ -1.84
TTC3-215ENST00000476784 KRTAP25-1Q3LHN0 102 aa3.56□□□□□ -1.84
TTC3-215ENST00000476784 ITPR2Q14571 2701 aa3.55□□□□□ -1.84
TTC3-215ENST00000476784 RELNP78509 3460 aa3.55□□□□□ -1.84
TTC3-215ENST00000476784 ZFHX3Q15911 3703 aa3.54□□□□□ -1.84
TTC3-215ENST00000476784 ASH1LQ9NR48 2969 aaKnown RBP3.54□□□□□ -1.84
TTC3-215ENST00000476784 KRTAP29-1A8MX34 341 aaPredicted RBP3.53□□□□□ -1.84
TTC3-215ENST00000476784 GCN1Q92616 2671 aaKnown RBP3.53□□□□□ -1.84
TTC3-215ENST00000476784 DCHS2Q6V1P9 2916 aa3.52□□□□□ -1.85
TTC3-215ENST00000476784 ITPR1Q14643 2758 aa3.52□□□□□ -1.85
TTC3-215ENST00000476784 ADGRG4Q8IZF6 3080 aa3.51□□□□□ -1.85
TTC3-215ENST00000476784 PP632Q6XCG6 107 aa3.51□□□□□ -1.85
TTC3-215ENST00000476784 CRCT1Q9UGL9 99 aa3.51□□□□□ -1.85
TTC3-215ENST00000476784 COL12A1Q99715 3063 aa3.5□□□□□ -1.85
TTC3-215ENST00000476784 A6NN06 94 aa3.49□□□□□ -1.85
TTC3-215ENST00000476784 VPS13CQ709C8 3753 aa3.48□□□□□ -1.85
TTC3-215ENST00000476784 CELSR2Q9HCU4 2923 aa3.47□□□□□ -1.85
TTC3-215ENST00000476784 NSD1Q96L73 2696 aaPredicted RBP3.47□□□□□ -1.85
TTC3-215ENST00000476784 MAP1AP78559 2803 aaPredicted RBP3.47□□□□□ -1.85
TTC3-215ENST00000476784 TACC2O95359 2948 aa3.47□□□□□ -1.85
TTC3-215ENST00000476784 SVEP1Q4LDE5 3571 aa3.47□□□□□ -1.85
TTC3-215ENST00000476784 FLNCQ14315 2725 aa3.47□□□□□ -1.85
TTC3-215ENST00000476784 KRTAP7-1Q8IUC3 87 aa3.46□□□□□ -1.85
TTC3-215ENST00000476784 KRTAP23-1A1A580 65 aa3.46□□□□□ -1.86
TTC3-215ENST00000476784 KRTAP13-1Q8IUC0 172 aa3.45□□□□□ -1.86
TTC3-215ENST00000476784 TENM4Q6N022 2769 aa3.44□□□□□ -1.86
TTC3-215ENST00000476784 NBEAL2Q6ZNJ1 2754 aa3.44□□□□□ -1.86
TTC3-215ENST00000476784 KRTAP13-3Q3SY46 172 aa3.43□□□□□ -1.86
TTC3-215ENST00000476784 CSMD1Q96PZ7 3565 aa3.42□□□□□ -1.86
TTC3-215ENST00000476784 UBR5O95071 2799 aaPredicted RBP3.42□□□□□ -1.86
TTC3-215ENST00000476784 KRTAP1-4P0C5Y4 121 aa3.41□□□□□ -1.86
TTC3-215ENST00000476784 CSMD2Q7Z408 3487 aa3.41□□□□□ -1.86
TTC3-215ENST00000476784 CELSR1Q9NYQ6 3014 aa3.41□□□□□ -1.86
TTC3-215ENST00000476784 H0YAA0 97 aa3.39□□□□□ -1.87
TTC3-215ENST00000476784 LRBAP50851 2863 aa3.39□□□□□ -1.87
TTC3-215ENST00000476784 HRNRQ86YZ3 2850 aaPredicted RBP3.38□□□□□ -1.87
TTC3-215ENST00000476784 KRTAP12-2P59991 146 aa3.36□□□□□ -1.87
TTC3-215ENST00000476784 UTP20O75691 2785 aaKnown RBP3.36□□□□□ -1.87
TTC3-215ENST00000476784 KRTAP15-1Q3LI76 137 aa3.35□□□□□ -1.87
TTC3-215ENST00000476784 APCP25054 2843 aa3.34□□□□□ -1.88
TTC3-215ENST00000476784 TENM1Q9UKZ4 2725 aa3.32□□□□□ -1.88
TTC3-215ENST00000476784 ZNF469Q96JG9 3925 aaPredicted RBP3.31□□□□□ -1.88
TTC3-215ENST00000476784 HIVEP1P15822 2718 aa3.31□□□□□ -1.88
TTC3-215ENST00000476784 NBPF19A0A087WUL8 3843 aa3.3□□□□□ -1.88
TTC3-215ENST00000476784 TENM2Q9NT68 2774 aa3.3□□□□□ -1.88
TTC3-215ENST00000476784 ZANQ9Y493 2812 aa3.29□□□□□ -1.88
TTC3-215ENST00000476784 LORP23490 312 aaPredicted RBP3.28□□□□□ -1.88
TTC3-215ENST00000476784 MXRA5Q9NR99 2828 aa3.27□□□□□ -1.89
TTC3-215ENST00000476784 NIPBLQ6KC79 2804 aaeCLIP3.26□□□□□ -1.894e-6■■■■□ 23.4
TTC3-215ENST00000476784 CUBNO60494 3623 aa3.23□□□□□ -1.89
TTC3-215ENST00000476784 NF1P21359 2839 aa3.23□□□□□ -1.89
TTC3-215ENST00000476784 FBN2P35556 2912 aa3.22□□□□□ -1.89
TTC3-215ENST00000476784 TENM3Q9P273 2699 aa3.22□□□□□ -1.89
TTC3-215ENST00000476784 AKAP9Q99996 3911 aa3.19□□□□□ -1.9
TTC3-215ENST00000476784 KRTAP13-4Q3LI77 160 aa3.18□□□□□ -1.9
TTC3-215ENST00000476784 KRTAP10-6P60371 365 aaPredicted RBP3.16□□□□□ -1.9
TTC3-215ENST00000476784 PKD1L1Q8TDX9 2849 aa3.16□□□□□ -1.9
TTC3-215ENST00000476784 OTOGQ6ZRI0 2925 aa3.15□□□□□ -1.91
TTC3-215ENST00000476784 PDZD2O15018 2839 aa3.13□□□□□ -1.91
TTC3-215ENST00000476784 KRTAP10-12P60413 245 aa3.12□□□□□ -1.91
TTC3-215ENST00000476784 VWFP04275 2813 aa3.12□□□□□ -1.91
TTC3-215ENST00000476784 KRTAP17-1Q9BYP8 105 aa3.1□□□□□ -1.91
TTC3-215ENST00000476784 KRTAP8-1Q8IUC2 63 aa3.1□□□□□ -1.91
TTC3-215ENST00000476784 KRTAP3-3Q9BYR6 98 aa3.08□□□□□ -1.92
TTC3-215ENST00000476784 KRTAP3-2Q9BYR7 98 aa3.08□□□□□ -1.92
TTC3-215ENST00000476784 KRTAP4-5Q9BYR2 181 aa3.08□□□□□ -1.92
TTC3-215ENST00000476784 FBN3Q75N90 2809 aa3.06□□□□□ -1.92
TTC3-215ENST00000476784 KRTAP12-1P59990 96 aa3.06□□□□□ -1.92
TTC3-215ENST00000476784 ANK2Q01484 3957 aa3.04□□□□□ -1.92
TTC3-215ENST00000476784 KRTAP10-5P60370 271 aa3.04□□□□□ -1.92
TTC3-215ENST00000476784 TGP01266 2768 aa3.02□□□□□ -1.93
TTC3-215ENST00000476784 TRRAPQ9Y4A5 3859 aa2.99□□□□□ -1.93
TTC3-215ENST00000476784 SRRM2Q9UQ35 2752 aaKnown RBP2.96□□□□□ -1.94
TTC3-215ENST00000476784 MT1HL1P0DM35 61 aa2.95□□□□□ -1.94
TTC3-215ENST00000476784 KRTAP12-3P60328 96 aa2.95□□□□□ -1.94
TTC3-215ENST00000476784 ANK3Q12955 4377 aaKnown RBP2.94□□□□□ -1.94
TTC3-215ENST00000476784 FBN1P35555 2871 aaKnown RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms