RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 PCOTHQ58A44 107 aa15.88■□□□□ 0.13
HOXB3-208ENST00000476342 A0A1B0GVX0 72 aa15.87■□□□□ 0.13
HOXB3-208ENST00000476342 Q75L30 129 aa15.87■□□□□ 0.13
HOXB3-208ENST00000476342 NDUFB1O75438 58 aa15.86■□□□□ 0.13
HOXB3-208ENST00000476342 ETDBQ3ZM63 59 aa15.85■□□□□ 0.13
HOXB3-208ENST00000476342 C8orf87E5RJ46 101 aa15.83■□□□□ 0.12
HOXB3-208ENST00000476342 C20orf166-AS1Q96NR2 134 aa15.81■□□□□ 0.12
HOXB3-208ENST00000476342 A8MWP4 228 aa15.8■□□□□ 0.12
HOXB3-208ENST00000476342 NOTCH2NLQ7Z3S9 236 aa15.78■□□□□ 0.12
HOXB3-208ENST00000476342 A8MUU9 505 aa15.77■□□□□ 0.11
HOXB3-208ENST00000476342 ATP11AUNQ6ZP68 121 aa15.77■□□□□ 0.11
HOXB3-208ENST00000476342 A0A0U1RQV1 116 aa15.76■□□□□ 0.11
HOXB3-208ENST00000476342 A0A1B0GV90 55 aa15.75■□□□□ 0.11
HOXB3-208ENST00000476342 Q6ZVQ6 151 aa15.75■□□□□ 0.11
HOXB3-208ENST00000476342 KRTAP16-1A8MUX0 517 aa15.74■□□□□ 0.11
HOXB3-208ENST00000476342 KRTAP4-1Q9BYQ7 146 aa15.74■□□□□ 0.11
HOXB3-208ENST00000476342 IGKV3D-7A0A0C4DH55 119 aa15.72■□□□□ 0.11
HOXB3-208ENST00000476342 BPY2O14599 106 aa15.71■□□□□ 0.11
HOXB3-208ENST00000476342 UBL5Q9BZL1 73 aa15.71■□□□□ 0.11
HOXB3-208ENST00000476342 LINC00846Q9NV44 126 aa15.69■□□□□ 0.1
HOXB3-208ENST00000476342 PRR15Q8IV56 129 aa15.68■□□□□ 0.1
HOXB3-208ENST00000476342 C8orf17Q9NRJ1 99 aa15.66■□□□□ 0.1
HOXB3-208ENST00000476342 K7EQZ3 153 aa15.6■□□□□ 0.09
HOXB3-208ENST00000476342 MMP24-AS1A0A0U1RRL7 71 aa15.51■□□□□ 0.07
HOXB3-208ENST00000476342 ACYP1P07311 99 aa15.5■□□□□ 0.07
HOXB3-208ENST00000476342 Q8N9P0 234 aaPredicted RBP15.5■□□□□ 0.07
HOXB3-208ENST00000476342 FAT4Q6V0I7 4981 aa15.48■□□□□ 0.07
HOXB3-208ENST00000476342 Q8N9L7 120 aa15.47■□□□□ 0.07
HOXB3-208ENST00000476342 TMEM254Q8TBM7 123 aa15.47■□□□□ 0.07
HOXB3-208ENST00000476342 FAM240AA0A1B0GVK7 77 aa15.46■□□□□ 0.07
HOXB3-208ENST00000476342 hDV103S1A0JD37 113 aa15.46■□□□□ 0.07
HOXB3-208ENST00000476342 MRPL34Q9BQ48 92 aaKnown RBP15.44■□□□□ 0.06
HOXB3-208ENST00000476342 CXCL6P80162 114 aa15.4■□□□□ 0.06
HOXB3-208ENST00000476342 ZCCHC13Q8WW36 166 aaKnown RBP15.39■□□□□ 0.05
HOXB3-208ENST00000476342 CASC2Q6XLA1 102 aa15.34■□□□□ 0.05
HOXB3-208ENST00000476342 WFDC13Q8IUB5 93 aa15.34■□□□□ 0.05
HOXB3-208ENST00000476342 NDUFS5O43920 106 aa15.32■□□□□ 0.04
HOXB3-208ENST00000476342 HCG22E2RYF7 251 aa15.28■□□□□ 0.04
HOXB3-208ENST00000476342 KRTAP19-2Q3LHN2 52 aa15.27■□□□□ 0.04
HOXB3-208ENST00000476342 ATP5EP2Q5VTU8 51 aa15.25■□□□□ 0.03
HOXB3-208ENST00000476342 J3QR89 54 aa15.23■□□□□ 0.03
HOXB3-208ENST00000476342 LCE2AQ5TA79 106 aaPredicted RBP15.23■□□□□ 0.03
HOXB3-208ENST00000476342 COX6B2Q6YFQ2 88 aa15.22■□□□□ 0.03
HOXB3-208ENST00000476342 LCE2CQ5TA81 110 aa15.21■□□□□ 0.03
HOXB3-208ENST00000476342 LINC00643Q86TS7 51 aa15.14■□□□□ 0.01
HOXB3-208ENST00000476342 SPINK7P58062 85 aa15.12■□□□□ 0.01
HOXB3-208ENST00000476342 HRES1P13985 223 aa15.08■□□□□ 0
HOXB3-208ENST00000476342 HIST1H4AP62805 103 aaKnown RBP15.07■□□□□ 0
HOXB3-208ENST00000476342 RBM12B-AS1Q9P1G2 102 aa15.06■□□□□ 0
HOXB3-208ENST00000476342 MT1HP80294 61 aa15.02■□□□□ -0
HOXB3-208ENST00000476342 Q5W150 140 aa15.02■□□□□ -0
HOXB3-208ENST00000476342 MPLKIPQ8TAP9 179 aa15□□□□□ -0.01
HOXB3-208ENST00000476342 FAM236DA0A1B0GTK5 79 aa14.99□□□□□ -0.01
HOXB3-208ENST00000476342 FAM236CP0DP71 79 aa14.99□□□□□ -0.01
HOXB3-208ENST00000476342 TP53AIP1Q9HCN2 124 aa14.99□□□□□ -0.01
HOXB3-208ENST00000476342 FLGP20930 4061 aaPredicted RBP14.94□□□□□ -0.02
HOXB3-208ENST00000476342 C7orf65Q6ZTY9 151 aa14.92□□□□□ -0.02
HOXB3-208ENST00000476342 IGKV2D-30A0A075B6S6 120 aa14.92□□□□□ -0.02
HOXB3-208ENST00000476342 IGKV2-30P06310 120 aa14.92□□□□□ -0.02
HOXB3-208ENST00000476342 K7ERU9 68 aa14.9□□□□□ -0.02
HOXB3-208ENST00000476342 A0A087WVE0 104 aa14.87□□□□□ -0.03
HOXB3-208ENST00000476342 M0R2T5 61 aa14.87□□□□□ -0.03
HOXB3-208ENST00000476342 TRAV22A0A0B4J277 110 aa14.72□□□□□ -0.05
HOXB3-208ENST00000476342 UQCRQO14949 82 aa14.69□□□□□ -0.06
HOXB3-208ENST00000476342 PCP4P48539 62 aa14.69□□□□□ -0.06
HOXB3-208ENST00000476342 KRTAP10-6P60371 365 aaPredicted RBP14.65□□□□□ -0.06
HOXB3-208ENST00000476342 IMUPQ9GZP8 106 aa14.61□□□□□ -0.07
HOXB3-208ENST00000476342 LORP23490 312 aaPredicted RBP14.6□□□□□ -0.07
HOXB3-208ENST00000476342 LOC101927531A0A1B0GV80 90 aa14.58□□□□□ -0.07
HOXB3-208ENST00000476342 ATOX1O00244 68 aa14.58□□□□□ -0.07
HOXB3-208ENST00000476342 MT-ATP8P03928 68 aa14.58□□□□□ -0.08
HOXB3-208ENST00000476342 C4orf26Q17RF5 130 aa14.58□□□□□ -0.08
HOXB3-208ENST00000476342 H0Y9P7 68 aa14.57□□□□□ -0.08
HOXB3-208ENST00000476342 OCR1Q9BZK8 76 aa14.54□□□□□ -0.08
HOXB3-208ENST00000476342 H1FX-AS1Q4G0G2 97 aa14.53□□□□□ -0.08
HOXB3-208ENST00000476342 CYP4F30PQ9H0H9 118 aa14.53□□□□□ -0.08
HOXB3-208ENST00000476342 SCGB1A1P11684 91 aa14.52□□□□□ -0.08
HOXB3-208ENST00000476342 MP68P56378 58 aa14.44□□□□□ -0.1
HOXB3-208ENST00000476342 C1orf64Q8NEQ6 169 aa14.41□□□□□ -0.1
HOXB3-208ENST00000476342 C5orf47Q569G3 176 aa14.41□□□□□ -0.1
HOXB3-208ENST00000476342 LINC00208Q96KT6 92 aa14.39□□□□□ -0.11
HOXB3-208ENST00000476342 FAM236AA0A1B0GUQ0 79 aa14.34□□□□□ -0.11
HOXB3-208ENST00000476342 FAM236BA0A1B0GV22 79 aa14.34□□□□□ -0.11
HOXB3-208ENST00000476342 KRTAP3-1Q9BYR8 98 aa14.32□□□□□ -0.12
HOXB3-208ENST00000476342 KRTAP9-2Q9BYQ4 174 aa14.32□□□□□ -0.12
HOXB3-208ENST00000476342 H3BPC8 53 aa14.3□□□□□ -0.12
HOXB3-208ENST00000476342 KRTAP9-8Q9BYQ0 159 aa14.29□□□□□ -0.12
HOXB3-208ENST00000476342 SMIM20Q8N5G0 67 aa14.27□□□□□ -0.12
HOXB3-208ENST00000476342 LCE2DQ5TA82 110 aaPredicted RBP14.25□□□□□ -0.13
HOXB3-208ENST00000476342 TRAV7A0A075B6U4 112 aa14.19□□□□□ -0.14
HOXB3-208ENST00000476342 S4R3F8 94 aa14.19□□□□□ -0.14
HOXB3-208ENST00000476342 KLKP1Q107X0 134 aa14.18□□□□□ -0.14
HOXB3-208ENST00000476342 MT2AP02795 61 aa14.16□□□□□ -0.14
HOXB3-208ENST00000476342 LCA10Q71F78 164 aa14.07□□□□□ -0.16
HOXB3-208ENST00000476342 A8MUN3 132 aa14.07□□□□□ -0.16
HOXB3-208ENST00000476342 MT1FP04733 61 aa14.05□□□□□ -0.16
HOXB3-208ENST00000476342 KRTAP10-10P60014 251 aa14.05□□□□□ -0.16
HOXB3-208ENST00000476342 CSAG1Q6PB30 78 aa14.01□□□□□ -0.17
HOXB3-208ENST00000476342 SERP2Q8N6R1 65 aa13.93□□□□□ -0.18
HOXB3-208ENST00000476342 KRTAP3-3Q9BYR6 98 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms