RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 H3BQ85 93 aa6.36□□□□□ -1.39
MRPL55-228ENST00000476267 TMEM256-PLSCR3K7ERE1 68 aa6.36□□□□□ -1.39
MRPL55-228ENST00000476267 DNAL4O96015 105 aa6.36□□□□□ -1.39
MRPL55-228ENST00000476267 TRACP01848 142 aa6.36□□□□□ -1.39
MRPL55-228ENST00000476267 VAMP8Q9BV40 100 aa6.36□□□□□ -1.39
MRPL55-228ENST00000476267 C8orf87E5RJ46 101 aa6.35□□□□□ -1.39
MRPL55-228ENST00000476267 ZCCHC13Q8WW36 166 aaKnown RBP6.34□□□□□ -1.39
MRPL55-228ENST00000476267 UBE2V1Q13404 147 aa6.33□□□□□ -1.4
MRPL55-228ENST00000476267 K7ERJ3 54 aa6.32□□□□□ -1.4
MRPL55-228ENST00000476267 SPINK7P58062 85 aa6.32□□□□□ -1.4
MRPL55-228ENST00000476267 MTURNQ8N3F0 131 aa6.32□□□□□ -1.4
MRPL55-228ENST00000476267 Q8N9P0 234 aaPredicted RBP6.3□□□□□ -1.4
MRPL55-228ENST00000476267 PSMB2P49721 201 aa6.29□□□□□ -1.4
MRPL55-228ENST00000476267 HSD52Q0P140 79 aa6.28□□□□□ -1.4
MRPL55-228ENST00000476267 A8MWP4 228 aa6.27□□□□□ -1.41
MRPL55-228ENST00000476267 COX6CP09669 75 aa6.27□□□□□ -1.41
MRPL55-228ENST00000476267 J3KT08 172 aa6.26□□□□□ -1.41
MRPL55-228ENST00000476267 RBM3P98179 157 aaKnown RBP6.26□□□□□ -1.41
MRPL55-228ENST00000476267 VPS25Q9BRG1 176 aa6.26□□□□□ -1.41
MRPL55-228ENST00000476267 LINC00846Q9NV44 126 aa6.26□□□□□ -1.41
MRPL55-228ENST00000476267 Q6ZQT0 140 aa6.24□□□□□ -1.41
MRPL55-228ENST00000476267 WFDC13Q8IUB5 93 aa6.24□□□□□ -1.41
MRPL55-228ENST00000476267 DSCR8Q96T75 97 aa6.23□□□□□ -1.41
MRPL55-228ENST00000476267 C21orf62-AS1Q17RA5 79 aa6.22□□□□□ -1.41
MRPL55-228ENST00000476267 SMIM6P0DI80 62 aa6.21□□□□□ -1.42
MRPL55-228ENST00000476267 C8orf17Q9NRJ1 99 aa6.21□□□□□ -1.42
MRPL55-228ENST00000476267 C9JAW5 83 aa6.19□□□□□ -1.42
MRPL55-228ENST00000476267 IGKV3D-7A0A0C4DH55 119 aa6.18□□□□□ -1.42
MRPL55-228ENST00000476267 NDUFB1O75438 58 aa6.18□□□□□ -1.42
MRPL55-228ENST00000476267 KRTAP6-3Q3LI67 103 aa6.18□□□□□ -1.42
MRPL55-228ENST00000476267 BAALC-AS2P0C853 105 aa6.17□□□□□ -1.42
MRPL55-228ENST00000476267 A0A1B0GW54 56 aa6.15□□□□□ -1.42
MRPL55-228ENST00000476267 SCGB1C2P0DMR2 95 aa6.15□□□□□ -1.42
MRPL55-228ENST00000476267 Q6ZVQ6 151 aa6.15□□□□□ -1.42
MRPL55-228ENST00000476267 LOC110117498A0A087WWA1 95 aa6.14□□□□□ -1.43
MRPL55-228ENST00000476267 UQCR10Q9UDW1 63 aa6.14□□□□□ -1.43
MRPL55-228ENST00000476267 H1FX-AS1Q4G0G2 97 aa6.12□□□□□ -1.43
MRPL55-228ENST00000476267 PRR15Q8IV56 129 aa6.12□□□□□ -1.43
MRPL55-228ENST00000476267 MMP24-AS1A0A0U1RRL7 71 aa6.11□□□□□ -1.43
MRPL55-228ENST00000476267 LYRM7Q5U5X0 104 aa6.11□□□□□ -1.43
MRPL55-228ENST00000476267 JMJD7-PLA2G4BH0Y9G9 81 aa6.1□□□□□ -1.43
MRPL55-228ENST00000476267 TMEM254Q8TBM7 123 aa6.09□□□□□ -1.43
MRPL55-228ENST00000476267 MRPL34Q9BQ48 92 aaKnown RBP6.09□□□□□ -1.43
MRPL55-228ENST00000476267 PCP4L1A6NKN8 68 aa6.08□□□□□ -1.44
MRPL55-228ENST00000476267 PDE6GP18545 87 aa6.07□□□□□ -1.44
MRPL55-228ENST00000476267 C14orf132Q9NPU4 83 aa6.06□□□□□ -1.44
MRPL55-228ENST00000476267 ATXN8Q156A1 80 aa6.05□□□□□ -1.44
MRPL55-228ENST00000476267 TSTD3H0UI37 97 aa6.03□□□□□ -1.44
MRPL55-228ENST00000476267 NAA38Q9BRA0 125 aaKnown RBP6.03□□□□□ -1.44
MRPL55-228ENST00000476267 MUC12Q9UKN1 5478 aa6.02□□□□□ -1.45
MRPL55-228ENST00000476267 hDV103S1A0JD37 113 aa6.02□□□□□ -1.45
MRPL55-228ENST00000476267 K7EQZ3 153 aa6.02□□□□□ -1.45
MRPL55-228ENST00000476267 NREPQ16612 68 aa6.02□□□□□ -1.45
MRPL55-228ENST00000476267 Q5W150 140 aa6.02□□□□□ -1.45
MRPL55-228ENST00000476267 BATFQ16520 125 aa6.01□□□□□ -1.45
MRPL55-228ENST00000476267 NEBP20929 6669 aa6□□□□□ -1.45
MRPL55-228ENST00000476267 C7orf65Q6ZTY9 151 aa5.99□□□□□ -1.45
MRPL55-228ENST00000476267 IGKV2D-30A0A075B6S6 120 aa5.98□□□□□ -1.45
MRPL55-228ENST00000476267 IGKV2-30P06310 120 aa5.98□□□□□ -1.45
MRPL55-228ENST00000476267 MT1BP07438 61 aa5.98□□□□□ -1.45
MRPL55-228ENST00000476267 NDUFS5O43920 106 aa5.97□□□□□ -1.45
MRPL55-228ENST00000476267 M0R143 59 aa5.95□□□□□ -1.46
MRPL55-228ENST00000476267 C4orf26Q17RF5 130 aa5.93□□□□□ -1.46
MRPL55-228ENST00000476267 A6NN06 94 aa5.92□□□□□ -1.46
MRPL55-228ENST00000476267 KRTAP19-8Q3LI54 63 aa5.92□□□□□ -1.46
MRPL55-228ENST00000476267 TAX1BP3O14907 124 aa5.91□□□□□ -1.46
MRPL55-228ENST00000476267 SPRR2GQ9BYE4 73 aa5.91□□□□□ -1.46
MRPL55-228ENST00000476267 KRTAP3-1Q9BYR8 98 aa5.91□□□□□ -1.46
MRPL55-228ENST00000476267 BPY2O14599 106 aa5.9□□□□□ -1.46
MRPL55-228ENST00000476267 C5orf47Q569G3 176 aa5.89□□□□□ -1.47
MRPL55-228ENST00000476267 HCG22E2RYF7 251 aa5.88□□□□□ -1.47
MRPL55-228ENST00000476267 H3BT86 120 aa5.88□□□□□ -1.47
MRPL55-228ENST00000476267 Q5VV11 94 aa5.88□□□□□ -1.47
MRPL55-228ENST00000476267 CASC2Q6XLA1 102 aa5.88□□□□□ -1.47
MRPL55-228ENST00000476267 Q8N9L7 120 aa5.88□□□□□ -1.47
MRPL55-228ENST00000476267 KRTAP10-5P60370 271 aa5.87□□□□□ -1.47
MRPL55-228ENST00000476267 FAM236AA0A1B0GUQ0 79 aa5.85□□□□□ -1.47
MRPL55-228ENST00000476267 FAM236BA0A1B0GV22 79 aa5.85□□□□□ -1.47
MRPL55-228ENST00000476267 KRTAP5-9P26371 169 aa5.85□□□□□ -1.47
MRPL55-228ENST00000476267 CXCL6P80162 114 aa5.85□□□□□ -1.47
MRPL55-228ENST00000476267 LCA10Q71F78 164 aa5.83□□□□□ -1.48
MRPL55-228ENST00000476267 S4R3F8 94 aa5.83□□□□□ -1.48
MRPL55-228ENST00000476267 C9orf118A6NHY6 69 aa5.82□□□□□ -1.48
MRPL55-228ENST00000476267 MDN1Q9NU22 5596 aa5.82□□□□□ -1.48
MRPL55-228ENST00000476267 COL5A1-AS1Q5SY13 56 aa5.81□□□□□ -1.48
MRPL55-228ENST00000476267 KMT2DO14686 5537 aa5.8□□□□□ -1.48
MRPL55-228ENST00000476267 KRTAP20-1Q3LI63 56 aa5.8□□□□□ -1.48
MRPL55-228ENST00000476267 CSAG1Q6PB30 78 aa5.8□□□□□ -1.48
MRPL55-228ENST00000476267 A0A1W2PPM0 123 aa5.79□□□□□ -1.48
MRPL55-228ENST00000476267 KLKP1Q107X0 134 aa5.78□□□□□ -1.48
MRPL55-228ENST00000476267 C1orf64Q8NEQ6 169 aa5.78□□□□□ -1.48
MRPL55-228ENST00000476267 A0A1B0GV90 55 aa5.77□□□□□ -1.49
MRPL55-228ENST00000476267 KRTAP3-3Q9BYR6 98 aa5.77□□□□□ -1.49
MRPL55-228ENST00000476267 SPCS1Q9Y6A9 102 aa5.74□□□□□ -1.49
MRPL55-228ENST00000476267 SMCPP49901 116 aaPredicted RBP5.73□□□□□ -1.49
MRPL55-228ENST00000476267 K7EP34 96 aa5.72□□□□□ -1.49
MRPL55-228ENST00000476267 PRO0461Q9UI25 63 aa5.7□□□□□ -1.5
MRPL55-228ENST00000476267 UBL5Q9BZL1 73 aa5.68□□□□□ -1.5
MRPL55-228ENST00000476267 CRIPTQ9P021 101 aa5.67□□□□□ -1.5
MRPL55-228ENST00000476267 A0A087WVE0 104 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms