RNA–Protein interactions for RNA: ENST00000474952.5

TFAP2A-210, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 5

Gene TFAP2A, Length 1,621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-210ENST00000474952 KRTAP29-1A8MX34 341 aaPredicted RBP14.03□□□□□ -0.16
TFAP2A-210ENST00000474952 CASC2Q6XLA1 102 aa14.02□□□□□ -0.16
TFAP2A-210ENST00000474952 C8orf17Q9NRJ1 99 aa14.02□□□□□ -0.16
TFAP2A-210ENST00000474952 SMIM20Q8N5G0 67 aa14.01□□□□□ -0.17
TFAP2A-210ENST00000474952 SERP2Q8N6R1 65 aa14.01□□□□□ -0.17
TFAP2A-210ENST00000474952 TRAV7A0A075B6U4 112 aa13.97□□□□□ -0.17
TFAP2A-210ENST00000474952 LRP1Q07954 4544 aaKnown RBP13.97□□□□□ -0.17
TFAP2A-210ENST00000474952 hDV103S1A0JD37 113 aa13.96□□□□□ -0.17
TFAP2A-210ENST00000474952 COX7CP15954 63 aa13.96□□□□□ -0.17
TFAP2A-210ENST00000474952 NOTCH2NLQ7Z3S9 236 aa13.96□□□□□ -0.17
TFAP2A-210ENST00000474952 FAT3Q8TDW7 4589 aa13.96□□□□□ -0.18
TFAP2A-210ENST00000474952 OCR1Q9BZK8 76 aa13.95□□□□□ -0.18
TFAP2A-210ENST00000474952 TNXBP22105 4242 aa13.95□□□□□ -0.18
TFAP2A-210ENST00000474952 KRTAP4-5Q9BYR2 181 aa13.93□□□□□ -0.18
TFAP2A-210ENST00000474952 C8orf87E5RJ46 101 aa13.91□□□□□ -0.18
TFAP2A-210ENST00000474952 CCDC179H3BU77 68 aa13.91□□□□□ -0.18
TFAP2A-210ENST00000474952 UQCRQO14949 82 aa13.9□□□□□ -0.18
TFAP2A-210ENST00000474952 BIRC6Q9NR09 4857 aa13.89□□□□□ -0.19
TFAP2A-210ENST00000474952 MT1HL1P0DM35 61 aa13.88□□□□□ -0.19
TFAP2A-210ENST00000474952 TMEM254Q8TBM7 123 aa13.87□□□□□ -0.19
TFAP2A-210ENST00000474952 FLG2Q5D862 2391 aaPredicted RBP13.87□□□□□ -0.19
TFAP2A-210ENST00000474952 LINC00313P59037 77 aa13.86□□□□□ -0.19
TFAP2A-210ENST00000474952 MRPL34Q9BQ48 92 aaKnown RBP13.84□□□□□ -0.19
TFAP2A-210ENST00000474952 OXTP01178 125 aa13.82□□□□□ -0.2
TFAP2A-210ENST00000474952 RETNLBQ9BQ08 111 aa13.81□□□□□ -0.2
TFAP2A-210ENST00000474952 MYCBP2O75592 4640 aa13.76□□□□□ -0.21
TFAP2A-210ENST00000474952 NDUFS5O43920 106 aa13.74□□□□□ -0.21
TFAP2A-210ENST00000474952 KRTAP16-1A8MUX0 517 aa13.73□□□□□ -0.21
TFAP2A-210ENST00000474952 C20orf197Q8N268 126 aa13.73□□□□□ -0.21
TFAP2A-210ENST00000474952 HERC2O95714 4834 aa13.72□□□□□ -0.21
TFAP2A-210ENST00000474952 TP53AIP1Q9HCN2 124 aa13.72□□□□□ -0.21
TFAP2A-210ENST00000474952 C5orf47Q569G3 176 aa13.7□□□□□ -0.22
TFAP2A-210ENST00000474952 Q8N9P0 234 aaPredicted RBP13.67□□□□□ -0.22
TFAP2A-210ENST00000474952 SNURFQ9Y675 71 aa13.64□□□□□ -0.23
TFAP2A-210ENST00000474952 CYSTM1Q9H1C7 97 aa13.64□□□□□ -0.23
TFAP2A-210ENST00000474952 A0A0U1RQV1 116 aa13.63□□□□□ -0.23
TFAP2A-210ENST00000474952 KLKP1Q107X0 134 aa13.63□□□□□ -0.23
TFAP2A-210ENST00000474952 FP248Q71RG6 208 aaPredicted RBP13.63□□□□□ -0.23
TFAP2A-210ENST00000474952 DMBT1Q9UGM3 2413 aaPredicted RBP13.62□□□□□ -0.23
TFAP2A-210ENST00000474952 ABCA13Q86UQ4 5058 aa13.62□□□□□ -0.23
TFAP2A-210ENST00000474952 H0Y9P7 68 aa13.61□□□□□ -0.23
TFAP2A-210ENST00000474952 TRAV22A0A0B4J277 110 aa13.61□□□□□ -0.23
TFAP2A-210ENST00000474952 C9orf92A6NGG3 77 aa13.61□□□□□ -0.23
TFAP2A-210ENST00000474952 MP68P56378 58 aa13.61□□□□□ -0.23
TFAP2A-210ENST00000474952 ZCCHC13Q8WW36 166 aaKnown RBP13.53□□□□□ -0.24
TFAP2A-210ENST00000474952 H3BPC8 53 aa13.53□□□□□ -0.24
TFAP2A-210ENST00000474952 Q5W150 140 aa13.53□□□□□ -0.24
TFAP2A-210ENST00000474952 LINC00208Q96KT6 92 aa13.53□□□□□ -0.24
TFAP2A-210ENST00000474952 IGLV7-46A0A075B6I9 117 aa13.52□□□□□ -0.25
TFAP2A-210ENST00000474952 KRTAP13-3Q3SY46 172 aa13.5□□□□□ -0.25
TFAP2A-210ENST00000474952 C1orf64Q8NEQ6 169 aa13.47□□□□□ -0.25
TFAP2A-210ENST00000474952 H7BZZ5 65 aa13.46□□□□□ -0.25
TFAP2A-210ENST00000474952 J3QL48 77 aa13.46□□□□□ -0.25
TFAP2A-210ENST00000474952 NDUFC1O43677 76 aa13.46□□□□□ -0.25
TFAP2A-210ENST00000474952 C20orf166-AS1Q96NR2 134 aa13.46□□□□□ -0.25
TFAP2A-210ENST00000474952 A8MUU9 505 aa13.45□□□□□ -0.26
TFAP2A-210ENST00000474952 PRR4Q16378 134 aa13.43□□□□□ -0.26
TFAP2A-210ENST00000474952 TMEM258P61165 79 aa13.37□□□□□ -0.27
TFAP2A-210ENST00000474952 LOC101927531A0A1B0GV80 90 aa13.35□□□□□ -0.27
TFAP2A-210ENST00000474952 Q75L30 129 aa13.35□□□□□ -0.27
TFAP2A-210ENST00000474952 XP32Q5T750 250 aa13.29□□□□□ -0.28
TFAP2A-210ENST00000474952 CYP4F30PQ9H0H9 118 aa13.27□□□□□ -0.29
TFAP2A-210ENST00000474952 IGKV2-30P06310 120 aa13.26□□□□□ -0.29
TFAP2A-210ENST00000474952 TPRXLQ17RH7 258 aa13.26□□□□□ -0.29
TFAP2A-210ENST00000474952 PCOTHQ58A44 107 aa13.25□□□□□ -0.29
TFAP2A-210ENST00000474952 FAM236DA0A1B0GTK5 79 aa13.24□□□□□ -0.29
TFAP2A-210ENST00000474952 FAM236CP0DP71 79 aa13.24□□□□□ -0.29
TFAP2A-210ENST00000474952 RPL37P61927 97 aaKnown RBP13.22□□□□□ -0.29
TFAP2A-210ENST00000474952 IGKV2D-30A0A075B6S6 120 aa13.19□□□□□ -0.3
TFAP2A-210ENST00000474952 ATP5EP56381 51 aaPredicted RBP13.17□□□□□ -0.3
TFAP2A-210ENST00000474952 ATP11AUNQ6ZP68 121 aa13.15□□□□□ -0.3
TFAP2A-210ENST00000474952 SPANXA2-OT1Q8N9U9 137 aa13.14□□□□□ -0.31
TFAP2A-210ENST00000474952 PCLOQ9Y6V0 5065 aa13.14□□□□□ -0.31
TFAP2A-210ENST00000474952 C7orf65Q6ZTY9 151 aa13.12□□□□□ -0.31
TFAP2A-210ENST00000474952 HRES1P13985 223 aa13.06□□□□□ -0.32
TFAP2A-210ENST00000474952 SPINK7P58062 85 aa13.02□□□□□ -0.33
TFAP2A-210ENST00000474952 LPAP08519 4548 aa12.99□□□□□ -0.33
TFAP2A-210ENST00000474952 SERP1Q9Y6X1 66 aa12.96□□□□□ -0.33
TFAP2A-210ENST00000474952 RPS28P62857 69 aaKnown RBP12.92□□□□□ -0.34
TFAP2A-210ENST00000474952 LRP2P98164 4655 aa12.9□□□□□ -0.34
TFAP2A-210ENST00000474952 C4orf26Q17RF5 130 aa12.85□□□□□ -0.35
TFAP2A-210ENST00000474952 DMAC1Q96GE9 116 aa12.85□□□□□ -0.35
TFAP2A-210ENST00000474952 SEC61BP60468 96 aaKnown RBP12.8□□□□□ -0.36
TFAP2A-210ENST00000474952 HERC1Q15751 4861 aa12.79□□□□□ -0.36
TFAP2A-210ENST00000474952 ACYP2P14621 99 aa12.77□□□□□ -0.36
TFAP2A-210ENST00000474952 COA5Q86WW8 74 aa12.77□□□□□ -0.36
TFAP2A-210ENST00000474952 A8MUN3 132 aa12.71□□□□□ -0.37
TFAP2A-210ENST00000474952 HMCN2Q8NDA2 5059 aa12.69□□□□□ -0.38
TFAP2A-210ENST00000474952 COX6B2Q6YFQ2 88 aa12.69□□□□□ -0.38
TFAP2A-210ENST00000474952 KRTAP3-1Q9BYR8 98 aa12.69□□□□□ -0.38
TFAP2A-210ENST00000474952 SMIM26A0A096LP01 95 aa12.61□□□□□ -0.39
TFAP2A-210ENST00000474952 MUC17Q685J3 4493 aa12.61□□□□□ -0.39
TFAP2A-210ENST00000474952 CHKB-CPT1BH3BT56 60 aa12.57□□□□□ -0.4
TFAP2A-210ENST00000474952 MPLKIPQ8TAP9 179 aa12.57□□□□□ -0.4
TFAP2A-210ENST00000474952 KRTAP4-1Q9BYQ7 146 aa12.56□□□□□ -0.4
TFAP2A-210ENST00000474952 RBM12B-AS1Q9P1G2 102 aa12.49□□□□□ -0.41
TFAP2A-210ENST00000474952 H1FX-AS1Q4G0G2 97 aa12.38□□□□□ -0.43
TFAP2A-210ENST00000474952 Q1T7F1 81 aa12.37□□□□□ -0.43
TFAP2A-210ENST00000474952 V9GYY9 64 aa12.32□□□□□ -0.44
TFAP2A-210ENST00000474952 SPTSSBQ8NFR3 76 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms