RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 IGLV7-46A0A075B6I9 117 aa5.86□□□□□ -1.47
COL12A1-206ENST00000474564 IGHV6-1A0A0B4J1U7 121 aa5.86□□□□□ -1.47
COL12A1-206ENST00000474564 HCG22E2RYF7 251 aa5.86□□□□□ -1.47
COL12A1-206ENST00000474564 WFDC13Q8IUB5 93 aa5.86□□□□□ -1.47
COL12A1-206ENST00000474564 RETNLBQ9BQ08 111 aa5.86□□□□□ -1.47
COL12A1-206ENST00000474564 PCP4P48539 62 aa5.85□□□□□ -1.47
COL12A1-206ENST00000474564 PRR15Q8IV56 129 aa5.85□□□□□ -1.47
COL12A1-206ENST00000474564 Q96NJ1 140 aa5.85□□□□□ -1.47
COL12A1-206ENST00000474564 A0A1B0GVX0 72 aa5.84□□□□□ -1.47
COL12A1-206ENST00000474564 C8orf87E5RJ46 101 aa5.84□□□□□ -1.47
COL12A1-206ENST00000474564 CASC2Q6XLA1 102 aa5.84□□□□□ -1.47
COL12A1-206ENST00000474564 SMIM20Q8N5G0 67 aa5.84□□□□□ -1.47
COL12A1-206ENST00000474564 LINC00313P59037 77 aa5.82□□□□□ -1.48
COL12A1-206ENST00000474564 C8orf17Q9NRJ1 99 aa5.81□□□□□ -1.48
COL12A1-206ENST00000474564 hDV103S1A0JD37 113 aa5.8□□□□□ -1.48
COL12A1-206ENST00000474564 NDUFS5O43920 106 aa5.8□□□□□ -1.48
COL12A1-206ENST00000474564 PKHD1L1Q86WI1 4243 aa5.78□□□□□ -1.48
COL12A1-206ENST00000474564 DMBT1Q9UGM3 2413 aaPredicted RBP5.77□□□□□ -1.49
COL12A1-206ENST00000474564 TRAV7A0A075B6U4 112 aa5.77□□□□□ -1.49
COL12A1-206ENST00000474564 MMP24-AS1A0A0U1RRL7 71 aa5.77□□□□□ -1.49
COL12A1-206ENST00000474564 SERP2Q8N6R1 65 aa5.77□□□□□ -1.49
COL12A1-206ENST00000474564 TMEM254Q8TBM7 123 aa5.76□□□□□ -1.49
COL12A1-206ENST00000474564 HERC2O95714 4834 aa5.75□□□□□ -1.49
COL12A1-206ENST00000474564 C9orf92A6NGG3 77 aa5.75□□□□□ -1.49
COL12A1-206ENST00000474564 COX7CP15954 63 aa5.75□□□□□ -1.49
COL12A1-206ENST00000474564 TPRXLQ17RH7 258 aa5.75□□□□□ -1.49
COL12A1-206ENST00000474564 MRPL34Q9BQ48 92 aaKnown RBP5.74□□□□□ -1.49
COL12A1-206ENST00000474564 UQCRQO14949 82 aa5.73□□□□□ -1.49
COL12A1-206ENST00000474564 MP68P56378 58 aa5.71□□□□□ -1.5
COL12A1-206ENST00000474564 KRTAP13-3Q3SY46 172 aa5.71□□□□□ -1.5
COL12A1-206ENST00000474564 TP53AIP1Q9HCN2 124 aa5.71□□□□□ -1.5
COL12A1-206ENST00000474564 CCDC179H3BU77 68 aa5.68□□□□□ -1.5
COL12A1-206ENST00000474564 ATP11AUNQ6ZP68 121 aa5.68□□□□□ -1.5
COL12A1-206ENST00000474564 NOTCH2NLQ7Z3S9 236 aa5.68□□□□□ -1.5
COL12A1-206ENST00000474564 C20orf197Q8N268 126 aa5.68□□□□□ -1.5
COL12A1-206ENST00000474564 OCR1Q9BZK8 76 aa5.68□□□□□ -1.5
COL12A1-206ENST00000474564 H0Y9P7 68 aa5.67□□□□□ -1.5
COL12A1-206ENST00000474564 C5orf47Q569G3 176 aa5.67□□□□□ -1.5
COL12A1-206ENST00000474564 LRP1Q07954 4544 aaKnown RBP5.67□□□□□ -1.5
COL12A1-206ENST00000474564 TRAV22A0A0B4J277 110 aa5.66□□□□□ -1.5
COL12A1-206ENST00000474564 Q75L30 129 aa5.65□□□□□ -1.5
COL12A1-206ENST00000474564 Q8N9P0 234 aaPredicted RBP5.65□□□□□ -1.5
COL12A1-206ENST00000474564 FAT3Q8TDW7 4589 aa5.64□□□□□ -1.51
COL12A1-206ENST00000474564 SEC61BP60468 96 aaKnown RBP5.64□□□□□ -1.51
COL12A1-206ENST00000474564 XP32Q5T750 250 aa5.64□□□□□ -1.51
COL12A1-206ENST00000474564 C20orf166-AS1Q96NR2 134 aa5.64□□□□□ -1.51
COL12A1-206ENST00000474564 SNURFQ9Y675 71 aa5.64□□□□□ -1.51
COL12A1-206ENST00000474564 MYCBP2O75592 4640 aa5.63□□□□□ -1.51
COL12A1-206ENST00000474564 A8MUU9 505 aa5.63□□□□□ -1.51
COL12A1-206ENST00000474564 KRTAP16-1A8MUX0 517 aa5.63□□□□□ -1.51
COL12A1-206ENST00000474564 H3BPC8 53 aa5.62□□□□□ -1.51
COL12A1-206ENST00000474564 RPL37P61927 97 aaKnown RBP5.62□□□□□ -1.51
COL12A1-206ENST00000474564 LINC00208Q96KT6 92 aa5.62□□□□□ -1.51
COL12A1-206ENST00000474564 TNXBP22105 4242 aa5.61□□□□□ -1.51
COL12A1-206ENST00000474564 NDUFC1O43677 76 aa5.59□□□□□ -1.51
COL12A1-206ENST00000474564 C1orf64Q8NEQ6 169 aa5.59□□□□□ -1.51
COL12A1-206ENST00000474564 ZCCHC13Q8WW36 166 aaKnown RBP5.59□□□□□ -1.51
COL12A1-206ENST00000474564 ABCA13Q86UQ4 5058 aa5.58□□□□□ -1.52
COL12A1-206ENST00000474564 A0A0U1RQV1 116 aa5.58□□□□□ -1.52
COL12A1-206ENST00000474564 KLKP1Q107X0 134 aa5.58□□□□□ -1.52
COL12A1-206ENST00000474564 LOC101927531A0A1B0GV80 90 aa5.56□□□□□ -1.52
COL12A1-206ENST00000474564 PCOTHQ58A44 107 aa5.54□□□□□ -1.52
COL12A1-206ENST00000474564 TMEM258P61165 79 aa5.53□□□□□ -1.52
COL12A1-206ENST00000474564 IGKV2D-30A0A075B6S6 120 aa5.52□□□□□ -1.53
COL12A1-206ENST00000474564 IGKV2-30P06310 120 aa5.52□□□□□ -1.53
COL12A1-206ENST00000474564 Q5W150 140 aa5.52□□□□□ -1.53
COL12A1-206ENST00000474564 FAM236DA0A1B0GTK5 79 aa5.51□□□□□ -1.53
COL12A1-206ENST00000474564 FAM236CP0DP71 79 aa5.51□□□□□ -1.53
COL12A1-206ENST00000474564 ATP5EP56381 51 aaPredicted RBP5.5□□□□□ -1.53
COL12A1-206ENST00000474564 H7BZZ5 65 aa5.49□□□□□ -1.53
COL12A1-206ENST00000474564 C7orf65Q6ZTY9 151 aa5.49□□□□□ -1.53
COL12A1-206ENST00000474564 CYSTM1Q9H1C7 97 aa5.49□□□□□ -1.53
COL12A1-206ENST00000474564 PCLOQ9Y6V0 5065 aa5.48□□□□□ -1.53
COL12A1-206ENST00000474564 SPINK7P58062 85 aa5.46□□□□□ -1.54
COL12A1-206ENST00000474564 CYP4F30PQ9H0H9 118 aa5.45□□□□□ -1.54
COL12A1-206ENST00000474564 RBM12B-AS1Q9P1G2 102 aa5.42□□□□□ -1.54
COL12A1-206ENST00000474564 SPANXA2-OT1Q8N9U9 137 aa5.41□□□□□ -1.54
COL12A1-206ENST00000474564 HRES1P13985 223 aa5.39□□□□□ -1.55
COL12A1-206ENST00000474564 SERP1Q9Y6X1 66 aa5.36□□□□□ -1.55
COL12A1-206ENST00000474564 CHKB-CPT1BH3BT56 60 aa5.34□□□□□ -1.55
COL12A1-206ENST00000474564 ACYP2P14621 99 aa5.34□□□□□ -1.55
COL12A1-206ENST00000474564 COX6B2Q6YFQ2 88 aa5.34□□□□□ -1.55
COL12A1-206ENST00000474564 C4orf26Q17RF5 130 aa5.32□□□□□ -1.56
COL12A1-206ENST00000474564 A8MUN3 132 aa5.3□□□□□ -1.56
COL12A1-206ENST00000474564 COA5Q86WW8 74 aa5.29□□□□□ -1.56
COL12A1-206ENST00000474564 DMAC1Q96GE9 116 aa5.29□□□□□ -1.56
COL12A1-206ENST00000474564 LPAP08519 4548 aa5.29□□□□□ -1.56
COL12A1-206ENST00000474564 HERC1Q15751 4861 aa5.29□□□□□ -1.56
COL12A1-206ENST00000474564 KRTAP4-1Q9BYQ7 146 aa5.28□□□□□ -1.56
COL12A1-206ENST00000474564 RPS28P62857 69 aaKnown RBP5.27□□□□□ -1.57
COL12A1-206ENST00000474564 H1FX-AS1Q4G0G2 97 aa5.25□□□□□ -1.57
COL12A1-206ENST00000474564 SPTSSBQ8NFR3 76 aa5.24□□□□□ -1.57
COL12A1-206ENST00000474564 MPLKIPQ8TAP9 179 aa5.24□□□□□ -1.57
COL12A1-206ENST00000474564 SMIM26A0A096LP01 95 aa5.22□□□□□ -1.57
COL12A1-206ENST00000474564 HMCN2Q8NDA2 5059 aa5.22□□□□□ -1.57
COL12A1-206ENST00000474564 LRP2P98164 4655 aa5.21□□□□□ -1.58
COL12A1-206ENST00000474564 S4R3F8 94 aa5.17□□□□□ -1.58
COL12A1-206ENST00000474564 V9GYY9 64 aa5.17□□□□□ -1.58
COL12A1-206ENST00000474564 M0R2T5 61 aa5.15□□□□□ -1.59
COL12A1-206ENST00000474564 KRTAP3-1Q9BYR8 98 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms