RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 KRTAP9-8Q9BYQ0 159 aa10.26□□□□□ -0.77
PDLIM4-206ENST00000474421 C21orf62-AS1Q17RA5 79 aa10.25□□□□□ -0.77
PDLIM4-206ENST00000474421 A0A1B0GVX0 72 aa10.23□□□□□ -0.77
PDLIM4-206ENST00000474421 J3KT08 172 aa10.21□□□□□ -0.77
PDLIM4-206ENST00000474421 MPLKIPQ8TAP9 179 aa10.21□□□□□ -0.77
PDLIM4-206ENST00000474421 HRES1P13985 223 aa10.2□□□□□ -0.78
PDLIM4-206ENST00000474421 C9JAW5 83 aa10.19□□□□□ -0.78
PDLIM4-206ENST00000474421 BAALC-AS2P0C853 105 aa10.19□□□□□ -0.78
PDLIM4-206ENST00000474421 KRTAP3-3Q9BYR6 98 aa10.16□□□□□ -0.78
PDLIM4-206ENST00000474421 KRTAP3-2Q9BYR7 98 aa10.16□□□□□ -0.78
PDLIM4-206ENST00000474421 NDUFB1O75438 58 aa10.13□□□□□ -0.79
PDLIM4-206ENST00000474421 Q6ZQT0 140 aa10.13□□□□□ -0.79
PDLIM4-206ENST00000474421 MTURNQ8N3F0 131 aa10.13□□□□□ -0.79
PDLIM4-206ENST00000474421 PCP4L1A6NKN8 68 aa10.12□□□□□ -0.79
PDLIM4-206ENST00000474421 ZCCHC13Q8WW36 166 aaKnown RBP10.12□□□□□ -0.79
PDLIM4-206ENST00000474421 M0R143 59 aa10.1□□□□□ -0.79
PDLIM4-206ENST00000474421 MT2AP02795 61 aa10.1□□□□□ -0.79
PDLIM4-206ENST00000474421 USH2AO75445 5202 aa10.1□□□□□ -0.79
PDLIM4-206ENST00000474421 A0A1B0GW54 56 aa10.09□□□□□ -0.79
PDLIM4-206ENST00000474421 JMJD7-PLA2G4BH0Y9G9 81 aa10.09□□□□□ -0.79
PDLIM4-206ENST00000474421 ATXN8Q156A1 80 aa10.09□□□□□ -0.79
PDLIM4-206ENST00000474421 PDE6GP18545 87 aa10.06□□□□□ -0.8
PDLIM4-206ENST00000474421 SPINK7P58062 85 aa10.05□□□□□ -0.8
PDLIM4-206ENST00000474421 Q8N9P0 234 aaPredicted RBP10.05□□□□□ -0.8
PDLIM4-206ENST00000474421 LOC110117498A0A087WWA1 95 aa10.04□□□□□ -0.8
PDLIM4-206ENST00000474421 A8MWP4 228 aa10.03□□□□□ -0.8
PDLIM4-206ENST00000474421 BATFQ16520 125 aa10.03□□□□□ -0.8
PDLIM4-206ENST00000474421 SSPOA2VEC9 5147 aa10.02□□□□□ -0.8
PDLIM4-206ENST00000474421 MT1FP04733 61 aa10.01□□□□□ -0.81
PDLIM4-206ENST00000474421 KRTAP10-10P60014 251 aa10.01□□□□□ -0.81
PDLIM4-206ENST00000474421 LYRM7Q5U5X0 104 aa10.01□□□□□ -0.81
PDLIM4-206ENST00000474421 C8orf17Q9NRJ1 99 aa10.01□□□□□ -0.81
PDLIM4-206ENST00000474421 NAA38Q9BRA0 125 aaKnown RBP9.98□□□□□ -0.81
PDLIM4-206ENST00000474421 IGKV3D-7A0A0C4DH55 119 aa9.96□□□□□ -0.82
PDLIM4-206ENST00000474421 KRTAP9-3Q9BYQ3 159 aa9.95□□□□□ -0.82
PDLIM4-206ENST00000474421 C14orf132Q9NPU4 83 aa9.95□□□□□ -0.82
PDLIM4-206ENST00000474421 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.94□□□□□ -0.82
PDLIM4-206ENST00000474421 Q6ZVQ6 151 aa9.94□□□□□ -0.82
PDLIM4-206ENST00000474421 NREPQ16612 68 aa9.92□□□□□ -0.82
PDLIM4-206ENST00000474421 WFDC13Q8IUB5 93 aa9.92□□□□□ -0.82
PDLIM4-206ENST00000474421 PRR15Q8IV56 129 aa9.92□□□□□ -0.82
PDLIM4-206ENST00000474421 LCE2BO14633 110 aa9.91□□□□□ -0.82
PDLIM4-206ENST00000474421 COL5A1-AS1Q5SY13 56 aa9.88□□□□□ -0.83
PDLIM4-206ENST00000474421 KRTAP9-7A8MTY7 169 aa9.87□□□□□ -0.83
PDLIM4-206ENST00000474421 TMEM254Q8TBM7 123 aa9.86□□□□□ -0.83
PDLIM4-206ENST00000474421 MRPL34Q9BQ48 92 aaKnown RBP9.85□□□□□ -0.83
PDLIM4-206ENST00000474421 FCGBPQ9Y6R7 5405 aaPredicted RBP9.84□□□□□ -0.83
PDLIM4-206ENST00000474421 MMP24-AS1A0A0U1RRL7 71 aa9.83□□□□□ -0.84
PDLIM4-206ENST00000474421 KRTAP19-1Q8IUB9 90 aa9.83□□□□□ -0.84
PDLIM4-206ENST00000474421 TAX1BP3O14907 124 aa9.81□□□□□ -0.84
PDLIM4-206ENST00000474421 hDV103S1A0JD37 113 aa9.79□□□□□ -0.84
PDLIM4-206ENST00000474421 C9orf118A6NHY6 69 aa9.79□□□□□ -0.84
PDLIM4-206ENST00000474421 H3BT86 120 aa9.78□□□□□ -0.84
PDLIM4-206ENST00000474421 NDUFS5O43920 106 aa9.77□□□□□ -0.85
PDLIM4-206ENST00000474421 K7EQZ3 153 aa9.76□□□□□ -0.85
PDLIM4-206ENST00000474421 LINC00846Q9NV44 126 aa9.76□□□□□ -0.85
PDLIM4-206ENST00000474421 A0A1W2PPM0 123 aa9.73□□□□□ -0.85
PDLIM4-206ENST00000474421 BPY2O14599 106 aa9.73□□□□□ -0.85
PDLIM4-206ENST00000474421 H1FX-AS1Q4G0G2 97 aa9.73□□□□□ -0.85
PDLIM4-206ENST00000474421 IGKV2D-30A0A075B6S6 120 aa9.66□□□□□ -0.86
PDLIM4-206ENST00000474421 IGKV2-30P06310 120 aa9.66□□□□□ -0.86
PDLIM4-206ENST00000474421 C7orf65Q6ZTY9 151 aa9.66□□□□□ -0.86
PDLIM4-206ENST00000474421 SPCS1Q9Y6A9 102 aa9.66□□□□□ -0.86
PDLIM4-206ENST00000474421 KRTAP19-6Q3LI70 58 aa9.63□□□□□ -0.87
PDLIM4-206ENST00000474421 GTF2H5Q6ZYL4 71 aa9.62□□□□□ -0.87
PDLIM4-206ENST00000474421 Q5W150 140 aa9.61□□□□□ -0.87
PDLIM4-206ENST00000474421 CASC2Q6XLA1 102 aa9.61□□□□□ -0.87
PDLIM4-206ENST00000474421 MACF1Q9UPN3 7388 aaKnown RBP9.61□□□□□ -0.87
PDLIM4-206ENST00000474421 K7EP34 96 aa9.6□□□□□ -0.87
PDLIM4-206ENST00000474421 HCG22E2RYF7 251 aa9.57□□□□□ -0.88
PDLIM4-206ENST00000474421 Q8N9L7 120 aa9.57□□□□□ -0.88
PDLIM4-206ENST00000474421 A0A1B0GV90 55 aa9.56□□□□□ -0.88
PDLIM4-206ENST00000474421 CXCL6P80162 114 aa9.55□□□□□ -0.88
PDLIM4-206ENST00000474421 C4orf26Q17RF5 130 aa9.5□□□□□ -0.89
PDLIM4-206ENST00000474421 SYNE2Q8WXH0 6885 aaKnown RBP9.5□□□□□ -0.89
PDLIM4-206ENST00000474421 UBL5Q9BZL1 73 aa9.49□□□□□ -0.89
PDLIM4-206ENST00000474421 SMCPP49901 116 aaPredicted RBP9.47□□□□□ -0.89
PDLIM4-206ENST00000474421 F8W1H4 67 aa9.43□□□□□ -0.9
PDLIM4-206ENST00000474421 PRO0461Q9UI25 63 aa9.41□□□□□ -0.9
PDLIM4-206ENST00000474421 C5orf47Q569G3 176 aa9.37□□□□□ -0.91
PDLIM4-206ENST00000474421 S4R3F8 94 aa9.35□□□□□ -0.91
PDLIM4-206ENST00000474421 FAM236AA0A1B0GUQ0 79 aa9.34□□□□□ -0.91
PDLIM4-206ENST00000474421 FAM236BA0A1B0GV22 79 aa9.34□□□□□ -0.91
PDLIM4-206ENST00000474421 TP53AIP1Q9HCN2 124 aa9.34□□□□□ -0.91
PDLIM4-206ENST00000474421 CSAG1Q6PB30 78 aa9.32□□□□□ -0.92
PDLIM4-206ENST00000474421 C1orf64Q8NEQ6 169 aa9.32□□□□□ -0.92
PDLIM4-206ENST00000474421 KRTAP3-1Q9BYR8 98 aa9.32□□□□□ -0.92
PDLIM4-206ENST00000474421 ETDBQ3ZM63 59 aa9.31□□□□□ -0.92
PDLIM4-206ENST00000474421 KRTAP6-3Q3LI67 103 aa9.27□□□□□ -0.93
PDLIM4-206ENST00000474421 LCA10Q71F78 164 aa9.25□□□□□ -0.93
PDLIM4-206ENST00000474421 Q5VV11 94 aa9.2□□□□□ -0.94
PDLIM4-206ENST00000474421 SPRR2GQ9BYE4 73 aa9.18□□□□□ -0.94
PDLIM4-206ENST00000474421 A6NN06 94 aa9.16□□□□□ -0.94
PDLIM4-206ENST00000474421 J3QR89 54 aa9.14□□□□□ -0.95
PDLIM4-206ENST00000474421 MT1BP07438 61 aa9.14□□□□□ -0.95
PDLIM4-206ENST00000474421 KRTAP19-8Q3LI54 63 aa9.14□□□□□ -0.95
PDLIM4-206ENST00000474421 CYP4F30PQ9H0H9 118 aa9.14□□□□□ -0.95
PDLIM4-206ENST00000474421 KLKP1Q107X0 134 aa9.12□□□□□ -0.95
PDLIM4-206ENST00000474421 TRAV22A0A0B4J277 110 aa9.09□□□□□ -0.95
PDLIM4-206ENST00000474421 LOC101927531A0A1B0GV80 90 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms