RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 Q8N9L7 120 aa11.57□□□□□ -0.56
CDHR3-210ENST00000474330 A8MWP4 228 aa11.56□□□□□ -0.56
CDHR3-210ENST00000474330 K7EQZ3 153 aa11.55□□□□□ -0.56
CDHR3-210ENST00000474330 NDUFB1O75438 58 aa11.52□□□□□ -0.57
CDHR3-210ENST00000474330 PRR15Q8IV56 129 aa11.52□□□□□ -0.57
CDHR3-210ENST00000474330 UBR4Q5T4S7 5183 aa11.52□□□□□ -0.57
CDHR3-210ENST00000474330 A0A087WVE0 104 aa11.51□□□□□ -0.57
CDHR3-210ENST00000474330 A0A1B0GVX0 72 aa11.46□□□□□ -0.57
CDHR3-210ENST00000474330 LRP2P98164 4655 aa11.43□□□□□ -0.58
CDHR3-210ENST00000474330 IGHV6-1A0A0B4J1U7 121 aa11.42□□□□□ -0.58
CDHR3-210ENST00000474330 RETNLBQ9BQ08 111 aa11.41□□□□□ -0.58
CDHR3-210ENST00000474330 FAM236AA0A1B0GUQ0 79 aa11.4□□□□□ -0.58
CDHR3-210ENST00000474330 FAM236BA0A1B0GV22 79 aa11.4□□□□□ -0.58
CDHR3-210ENST00000474330 SCGB1A1P11684 91 aa11.4□□□□□ -0.58
CDHR3-210ENST00000474330 HCG22E2RYF7 251 aa11.39□□□□□ -0.59
CDHR3-210ENST00000474330 C8orf17Q9NRJ1 99 aa11.38□□□□□ -0.59
CDHR3-210ENST00000474330 MMP24-AS1A0A0U1RRL7 71 aa11.38□□□□□ -0.59
CDHR3-210ENST00000474330 C8orf87E5RJ46 101 aa11.36□□□□□ -0.59
CDHR3-210ENST00000474330 NOTCH2NLQ7Z3S9 236 aa11.35□□□□□ -0.59
CDHR3-210ENST00000474330 WFDC13Q8IUB5 93 aa11.34□□□□□ -0.59
CDHR3-210ENST00000474330 LINC00313P59037 77 aa11.33□□□□□ -0.6
CDHR3-210ENST00000474330 CASC2Q6XLA1 102 aa11.33□□□□□ -0.6
CDHR3-210ENST00000474330 FP248Q71RG6 208 aaPredicted RBP11.33□□□□□ -0.6
CDHR3-210ENST00000474330 LPAP08519 4548 aa11.32□□□□□ -0.6
CDHR3-210ENST00000474330 hDV103S1A0JD37 113 aa11.31□□□□□ -0.6
CDHR3-210ENST00000474330 ATOX1O00244 68 aa11.27□□□□□ -0.61
CDHR3-210ENST00000474330 TMEM254Q8TBM7 123 aa11.27□□□□□ -0.61
CDHR3-210ENST00000474330 MRPL34Q9BQ48 92 aaKnown RBP11.25□□□□□ -0.61
CDHR3-210ENST00000474330 IGLV7-46A0A075B6I9 117 aa11.23□□□□□ -0.61
CDHR3-210ENST00000474330 KRTAP16-1A8MUX0 517 aa11.23□□□□□ -0.61
CDHR3-210ENST00000474330 PRR4Q16378 134 aa11.23□□□□□ -0.61
CDHR3-210ENST00000474330 RNF213Q63HN8 5207 aa11.21□□□□□ -0.61
CDHR3-210ENST00000474330 SMIM20Q8N5G0 67 aa11.19□□□□□ -0.62
CDHR3-210ENST00000474330 C9orf92A6NGG3 77 aa11.18□□□□□ -0.62
CDHR3-210ENST00000474330 OCR1Q9BZK8 76 aa11.18□□□□□ -0.62
CDHR3-210ENST00000474330 Q8N9P0 234 aaPredicted RBP11.17□□□□□ -0.62
CDHR3-210ENST00000474330 ANAPC13Q9BS18 74 aa11.15□□□□□ -0.62
CDHR3-210ENST00000474330 TRAV7A0A075B6U4 112 aa11.13□□□□□ -0.63
CDHR3-210ENST00000474330 KRTAP13-3Q3SY46 172 aa11.13□□□□□ -0.63
CDHR3-210ENST00000474330 NDUFS5O43920 106 aa11.12□□□□□ -0.63
CDHR3-210ENST00000474330 SERP2Q8N6R1 65 aa11.12□□□□□ -0.63
CDHR3-210ENST00000474330 TP53AIP1Q9HCN2 124 aa11.11□□□□□ -0.63
CDHR3-210ENST00000474330 UQCRQO14949 82 aa11.08□□□□□ -0.64
CDHR3-210ENST00000474330 TPRXLQ17RH7 258 aa11.08□□□□□ -0.64
CDHR3-210ENST00000474330 C20orf166-AS1Q96NR2 134 aa11.07□□□□□ -0.64
CDHR3-210ENST00000474330 A8MUU9 505 aa11.06□□□□□ -0.64
CDHR3-210ENST00000474330 COX7CP15954 63 aa11.05□□□□□ -0.64
CDHR3-210ENST00000474330 PCP4P48539 62 aa11.02□□□□□ -0.65
CDHR3-210ENST00000474330 C5orf47Q569G3 176 aa11.01□□□□□ -0.65
CDHR3-210ENST00000474330 XP32Q5T750 250 aa11.01□□□□□ -0.65
CDHR3-210ENST00000474330 Q75L30 129 aa11.01□□□□□ -0.65
CDHR3-210ENST00000474330 TRAV22A0A0B4J277 110 aa10.98□□□□□ -0.65
CDHR3-210ENST00000474330 Q5W150 140 aa10.97□□□□□ -0.65
CDHR3-210ENST00000474330 H0Y9P7 68 aa10.95□□□□□ -0.66
CDHR3-210ENST00000474330 MP68P56378 58 aa10.94□□□□□ -0.66
CDHR3-210ENST00000474330 MUC2Q02817 5179 aa10.94□□□□□ -0.66
CDHR3-210ENST00000474330 RPL37P61927 97 aaKnown RBP10.93□□□□□ -0.66
CDHR3-210ENST00000474330 ZCCHC13Q8WW36 166 aaKnown RBP10.92□□□□□ -0.66
CDHR3-210ENST00000474330 CCDC179H3BU77 68 aa10.91□□□□□ -0.66
CDHR3-210ENST00000474330 C20orf197Q8N268 126 aa10.91□□□□□ -0.66
CDHR3-210ENST00000474330 H3BPC8 53 aa10.89□□□□□ -0.67
CDHR3-210ENST00000474330 A0A0U1RQV1 116 aa10.87□□□□□ -0.67
CDHR3-210ENST00000474330 LINC00208Q96KT6 92 aa10.87□□□□□ -0.67
CDHR3-210ENST00000474330 KLKP1Q107X0 134 aa10.85□□□□□ -0.67
CDHR3-210ENST00000474330 ATP11AUNQ6ZP68 121 aa10.84□□□□□ -0.67
CDHR3-210ENST00000474330 C1orf64Q8NEQ6 169 aa10.84□□□□□ -0.67
CDHR3-210ENST00000474330 SNURFQ9Y675 71 aa10.84□□□□□ -0.67
CDHR3-210ENST00000474330 MUC17Q685J3 4493 aa10.8□□□□□ -0.68
CDHR3-210ENST00000474330 LOC101927531A0A1B0GV80 90 aa10.8□□□□□ -0.68
CDHR3-210ENST00000474330 IGKV2-30P06310 120 aa10.77□□□□□ -0.68
CDHR3-210ENST00000474330 CYSTM1Q9H1C7 97 aa10.76□□□□□ -0.69
CDHR3-210ENST00000474330 CYP4F30PQ9H0H9 118 aa10.74□□□□□ -0.69
CDHR3-210ENST00000474330 PCOTHQ58A44 107 aa10.72□□□□□ -0.69
CDHR3-210ENST00000474330 IGKV2D-30A0A075B6S6 120 aa10.71□□□□□ -0.69
CDHR3-210ENST00000474330 NDUFC1O43677 76 aa10.71□□□□□ -0.69
CDHR3-210ENST00000474330 SEC61BP60468 96 aaKnown RBP10.7□□□□□ -0.7
CDHR3-210ENST00000474330 C7orf65Q6ZTY9 151 aa10.7□□□□□ -0.7
CDHR3-210ENST00000474330 H7BZZ5 65 aa10.67□□□□□ -0.7
CDHR3-210ENST00000474330 SPINK7P58062 85 aa10.67□□□□□ -0.7
CDHR3-210ENST00000474330 FAT4Q6V0I7 4981 aa10.58□□□□□ -0.72
CDHR3-210ENST00000474330 HRES1P13985 223 aa10.56□□□□□ -0.72
CDHR3-210ENST00000474330 SPANXA2-OT1Q8N9U9 137 aa10.54□□□□□ -0.72
CDHR3-210ENST00000474330 TMEM258P61165 79 aa10.53□□□□□ -0.72
CDHR3-210ENST00000474330 KRTAP4-1Q9BYQ7 146 aa10.49□□□□□ -0.73
CDHR3-210ENST00000474330 C4orf26Q17RF5 130 aa10.46□□□□□ -0.74
CDHR3-210ENST00000474330 FAM236DA0A1B0GTK5 79 aa10.44□□□□□ -0.74
CDHR3-210ENST00000474330 FAM236CP0DP71 79 aa10.44□□□□□ -0.74
CDHR3-210ENST00000474330 ATP5EP56381 51 aaPredicted RBP10.43□□□□□ -0.74
CDHR3-210ENST00000474330 LCE2AQ5TA79 106 aaPredicted RBP10.41□□□□□ -0.74
CDHR3-210ENST00000474330 COX6B2Q6YFQ2 88 aa10.38□□□□□ -0.75
CDHR3-210ENST00000474330 MPLKIPQ8TAP9 179 aa10.38□□□□□ -0.75
CDHR3-210ENST00000474330 DMAC1Q96GE9 116 aa10.36□□□□□ -0.75
CDHR3-210ENST00000474330 KRTAP3-1Q9BYR8 98 aa10.33□□□□□ -0.76
CDHR3-210ENST00000474330 A8MUN3 132 aa10.33□□□□□ -0.76
CDHR3-210ENST00000474330 RBM12B-AS1Q9P1G2 102 aa10.32□□□□□ -0.76
CDHR3-210ENST00000474330 ACYP2P14621 99 aa10.29□□□□□ -0.76
CDHR3-210ENST00000474330 KRTAP19-2Q3LHN2 52 aa10.21□□□□□ -0.78
CDHR3-210ENST00000474330 LCE2CQ5TA81 110 aa10.2□□□□□ -0.78
CDHR3-210ENST00000474330 SERP1Q9Y6X1 66 aa10.2□□□□□ -0.78
CDHR3-210ENST00000474330 COA5Q86WW8 74 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms