RNA–Protein interactions for RNA: ENST00000470972.5

SLC44A1-205, Transcript of solute carrier family 44 member 1, humanhuman

TSL 1 (best)

Gene SLC44A1, Length 10,433 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-205ENST00000470972 P0C880 135 aa6.11□□□□□ -1.43
SLC44A1-205ENST00000470972 H0YAA0 97 aa6.1□□□□□ -1.43
SLC44A1-205ENST00000470972 KRTAP10-10P60014 251 aa6.08□□□□□ -1.44
SLC44A1-205ENST00000470972 XP32Q5T750 250 aa6.05□□□□□ -1.44
SLC44A1-205ENST00000470972 REV3LO60673 3130 aa6.04□□□□□ -1.44
SLC44A1-205ENST00000470972 COL12A1Q99715 3063 aa6.03□□□□□ -1.44
SLC44A1-205ENST00000470972 TENM1Q9UKZ4 2725 aa6.03□□□□□ -1.44
SLC44A1-205ENST00000470972 FRYLO94915 3013 aa6.01□□□□□ -1.45
SLC44A1-205ENST00000470972 PRO2289Q9P1D8 64 aa6.01□□□□□ -1.45
SLC44A1-205ENST00000470972 CHD9Q3L8U1 2897 aa6□□□□□ -1.45
SLC44A1-205ENST00000470972 CELSR2Q9HCU4 2923 aa5.99□□□□□ -1.45
SLC44A1-205ENST00000470972 TACC2O95359 2948 aa5.98□□□□□ -1.45
SLC44A1-205ENST00000470972 LAMA3Q16787 3333 aa5.94□□□□□ -1.46
SLC44A1-205ENST00000470972 FLNCQ14315 2725 aa5.94□□□□□ -1.46
SLC44A1-205ENST00000470972 UNC80Q8N2C7 3258 aa5.92□□□□□ -1.46
SLC44A1-205ENST00000470972 BRCA2P51587 3418 aa5.92□□□□□ -1.46
SLC44A1-205ENST00000470972 TENM3Q9P273 2699 aa5.92□□□□□ -1.46
SLC44A1-205ENST00000470972 NF1P21359 2839 aa5.9□□□□□ -1.46
SLC44A1-205ENST00000470972 TGP01266 2768 aa5.9□□□□□ -1.46
SLC44A1-205ENST00000470972 HTTP42858 3142 aa5.9□□□□□ -1.47
SLC44A1-205ENST00000470972 CFAP47Q6ZTR5 3102 aa5.9□□□□□ -1.47
SLC44A1-205ENST00000470972 COL6A3P12111 3177 aa5.89□□□□□ -1.47
SLC44A1-205ENST00000470972 LAMA1P25391 3075 aa5.88□□□□□ -1.47
SLC44A1-205ENST00000470972 KRTAP1-4P0C5Y4 121 aa5.87□□□□□ -1.47
SLC44A1-205ENST00000470972 DNAH14Q0VDD8 3507 aa5.85□□□□□ -1.47
SLC44A1-205ENST00000470972 NBEAQ8NFP9 2946 aa5.85□□□□□ -1.47
SLC44A1-205ENST00000470972 TPRXLQ17RH7 258 aa5.84□□□□□ -1.48
SLC44A1-205ENST00000470972 TENM4Q6N022 2769 aa5.83□□□□□ -1.48
SLC44A1-205ENST00000470972 ZZEF1O43149 2961 aa5.82□□□□□ -1.48
SLC44A1-205ENST00000470972 DCHS2Q6V1P9 2916 aa5.81□□□□□ -1.48
SLC44A1-205ENST00000470972 BOD1L1Q8NFC6 3051 aa5.81□□□□□ -1.48
SLC44A1-205ENST00000470972 NIPBLQ6KC79 2804 aaeCLIP5.8□□□□□ -1.48
SLC44A1-205ENST00000470972 ATMQ13315 3056 aa5.8□□□□□ -1.48
SLC44A1-205ENST00000470972 VCANP13611 3396 aa5.78□□□□□ -1.48
SLC44A1-205ENST00000470972 KRTAP12-2P59991 146 aa5.78□□□□□ -1.48
SLC44A1-205ENST00000470972 SPEGQ15772 3267 aa5.76□□□□□ -1.49
SLC44A1-205ENST00000470972 TNRC18O15417 2968 aaPredicted RBP5.75□□□□□ -1.49
SLC44A1-205ENST00000470972 KRTAP13-3Q3SY46 172 aa5.74□□□□□ -1.49
SLC44A1-205ENST00000470972 PDZD2O15018 2839 aa5.74□□□□□ -1.49
SLC44A1-205ENST00000470972 ADGRG4Q8IZF6 3080 aa5.73□□□□□ -1.49
SLC44A1-205ENST00000470972 CDH23Q9H251 3354 aa5.71□□□□□ -1.49
SLC44A1-205ENST00000470972 CELSR1Q9NYQ6 3014 aa5.7□□□□□ -1.5
SLC44A1-205ENST00000470972 USP34Q70CQ2 3546 aa5.68□□□□□ -1.5
SLC44A1-205ENST00000470972 VWFP04275 2813 aa5.68□□□□□ -1.5
SLC44A1-205ENST00000470972 FBN2P35556 2912 aa5.65□□□□□ -1.5
SLC44A1-205ENST00000470972 PKD1L1Q8TDX9 2849 aa5.64□□□□□ -1.51
SLC44A1-205ENST00000470972 KRTAP15-1Q3LI76 137 aa5.64□□□□□ -1.51
SLC44A1-205ENST00000470972 KRTAP13-4Q3LI77 160 aa5.64□□□□□ -1.51
SLC44A1-205ENST00000470972 ZANQ9Y493 2812 aa5.64□□□□□ -1.51
SLC44A1-205ENST00000470972 DMXL1Q9Y485 3027 aa5.62□□□□□ -1.51
SLC44A1-205ENST00000470972 TENM2Q9NT68 2774 aa5.62□□□□□ -1.51
SLC44A1-205ENST00000470972 KRTAP21-3Q3LHN1 58 aa5.6□□□□□ -1.51
SLC44A1-205ENST00000470972 SZT2Q5T011 3432 aa5.59□□□□□ -1.51
SLC44A1-205ENST00000470972 KRTAP12-1P59990 96 aa5.56□□□□□ -1.52
SLC44A1-205ENST00000470972 CRCT1Q9UGL9 99 aa5.51□□□□□ -1.53
SLC44A1-205ENST00000470972 HRNRQ86YZ3 2850 aaPredicted RBP5.5□□□□□ -1.53
SLC44A1-205ENST00000470972 ZFHX4Q86UP3 3567 aa5.49□□□□□ -1.53
SLC44A1-205ENST00000470972 MXRA5Q9NR99 2828 aa5.48□□□□□ -1.53
SLC44A1-205ENST00000470972 EYSQ5T1H1 3165 aa5.42□□□□□ -1.54
SLC44A1-205ENST00000470972 SRRM2Q9UQ35 2752 aaKnown RBP5.42□□□□□ -1.54
SLC44A1-205ENST00000470972 SPTBN5Q9NRC6 3674 aaKnown RBP5.41□□□□□ -1.54
SLC44A1-205ENST00000470972 NBPF19A0A087WUL8 3843 aa5.4□□□□□ -1.54
SLC44A1-205ENST00000470972 LOC400499M0QZD8 3231 aa5.36□□□□□ -1.55
SLC44A1-205ENST00000470972 WDFY3Q8IZQ1 3526 aa5.36□□□□□ -1.55
SLC44A1-205ENST00000470972 MYO15AQ9UKN7 3530 aa5.35□□□□□ -1.55
SLC44A1-205ENST00000470972 ASPMQ8IZT6 3477 aa5.32□□□□□ -1.56
SLC44A1-205ENST00000470972 KRTAP3-1Q9BYR8 98 aa5.32□□□□□ -1.56
SLC44A1-205ENST00000470972 COL7A1Q02388 2944 aa5.29□□□□□ -1.56
SLC44A1-205ENST00000470972 INE1O15225 51 aa5.28□□□□□ -1.56
SLC44A1-205ENST00000470972 MEGF8Q7Z7M0 2845 aa5.26□□□□□ -1.57
SLC44A1-205ENST00000470972 KRTAP10-12P60413 245 aa5.23□□□□□ -1.57
SLC44A1-205ENST00000470972 KRTAP10-6P60371 365 aaPredicted RBP5.21□□□□□ -1.58
SLC44A1-205ENST00000470972 FBN3Q75N90 2809 aa5.2□□□□□ -1.58
SLC44A1-205ENST00000470972 LAMA5O15230 3695 aa5.19□□□□□ -1.58
SLC44A1-205ENST00000470972 CSMD1Q96PZ7 3565 aa5.17□□□□□ -1.58
SLC44A1-205ENST00000470972 DCHS1Q96JQ0 3298 aa5.13□□□□□ -1.59
SLC44A1-205ENST00000470972 SMG1Q96Q15 3661 aaKnown RBP5.13□□□□□ -1.59
SLC44A1-205ENST00000470972 ZFHX3Q15911 3703 aa5.12□□□□□ -1.59
SLC44A1-205ENST00000470972 DMDP11532 3685 aa5.07□□□□□ -1.6
SLC44A1-205ENST00000470972 KRTAP12-3P60328 96 aa5.05□□□□□ -1.6
SLC44A1-205ENST00000470972 FBN1P35555 2871 aaKnown RBP5.05□□□□□ -1.6
SLC44A1-205ENST00000470972 RELNP78509 3460 aa5.04□□□□□ -1.6
SLC44A1-205ENST00000470972 SPENQ96T58 3664 aaKnown RBP5.04□□□□□ -1.6
SLC44A1-205ENST00000470972 KRTAP10-5P60370 271 aa5.03□□□□□ -1.6
SLC44A1-205ENST00000470972 LCE3AQ5TA76 89 aa5□□□□□ -1.61
SLC44A1-205ENST00000470972 KRTAP3-2Q9BYR7 98 aa4.97□□□□□ -1.61
SLC44A1-205ENST00000470972 KRTAP3-3Q9BYR6 98 aa4.95□□□□□ -1.62
SLC44A1-205ENST00000470972 TRRAPQ9Y4A5 3859 aa4.89□□□□□ -1.63
SLC44A1-205ENST00000470972 MT1HL1P0DM35 61 aa4.87□□□□□ -1.63
SLC44A1-205ENST00000470972 OTOGQ6ZRI0 2925 aa4.87□□□□□ -1.63
SLC44A1-205ENST00000470972 KRTAP8-1Q8IUC2 63 aa4.83□□□□□ -1.64
SLC44A1-205ENST00000470972 VPS13CQ709C8 3753 aa4.83□□□□□ -1.64
SLC44A1-205ENST00000470972 CUBNO60494 3623 aa4.82□□□□□ -1.64
SLC44A1-205ENST00000470972 KRTAP4-5Q9BYR2 181 aa4.81□□□□□ -1.64
SLC44A1-205ENST00000470972 LORP23490 312 aaPredicted RBP4.79□□□□□ -1.64
SLC44A1-205ENST00000470972 SVEP1Q4LDE5 3571 aa4.78□□□□□ -1.64
SLC44A1-205ENST00000470972 CSMD3Q7Z407 3707 aa4.78□□□□□ -1.65
SLC44A1-205ENST00000470972 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
SLC44A1-205ENST00000470972 MUC3AQ02505 3323 aa4.69□□□□□ -1.66
SLC44A1-205ENST00000470972 ALMS1Q8TCU4 4167 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms