RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 MT1HL1P0DM35 61 aa4.74□□□□□ -1.65
GTF3A-206ENST00000470606 C1orf195Q5TG92 126 aa4.74□□□□□ -1.65
GTF3A-206ENST00000470606 FAM236AA0A1B0GUQ0 79 aa4.73□□□□□ -1.65
GTF3A-206ENST00000470606 FAM236BA0A1B0GV22 79 aa4.73□□□□□ -1.65
GTF3A-206ENST00000470606 ASB16-AS1Q495Z4 193 aa4.73□□□□□ -1.65
GTF3A-206ENST00000470606 SS18L2Q9UHA2 77 aa4.73□□□□□ -1.65
GTF3A-206ENST00000470606 SPINK1P00995 79 aa4.72□□□□□ -1.65
GTF3A-206ENST00000470606 NOTCH2NLQ7Z3S9 236 aa4.72□□□□□ -1.65
GTF3A-206ENST00000470606 A8MWP4 228 aa4.72□□□□□ -1.65
GTF3A-206ENST00000470606 SCGB1A1P11684 91 aa4.71□□□□□ -1.66
GTF3A-206ENST00000470606 PRR15Q8IV56 129 aa4.71□□□□□ -1.66
GTF3A-206ENST00000470606 RPS29P62273 56 aaKnown RBP4.69□□□□□ -1.66
GTF3A-206ENST00000470606 KRTAP29-1A8MX34 341 aaPredicted RBP4.68□□□□□ -1.66
GTF3A-206ENST00000470606 J3KT08 172 aa4.68□□□□□ -1.66
GTF3A-206ENST00000470606 SPAG11AQ6PDA7 123 aa4.68□□□□□ -1.66
GTF3A-206ENST00000470606 MMP24-AS1A0A0U1RRL7 71 aa4.68□□□□□ -1.66
GTF3A-206ENST00000470606 A0A1B0GVX0 72 aa4.68□□□□□ -1.66
GTF3A-206ENST00000470606 RETNLBQ9BQ08 111 aa4.68□□□□□ -1.66
GTF3A-206ENST00000470606 LIMD2Q9BT23 127 aa4.68□□□□□ -1.66
GTF3A-206ENST00000470606 IGHV6-1A0A0B4J1U7 121 aa4.67□□□□□ -1.66
GTF3A-206ENST00000470606 HCG22E2RYF7 251 aa4.66□□□□□ -1.66
GTF3A-206ENST00000470606 WFDC13Q8IUB5 93 aa4.66□□□□□ -1.66
GTF3A-206ENST00000470606 UBR4Q5T4S7 5183 aa4.66□□□□□ -1.66
GTF3A-206ENST00000470606 C8orf17Q9NRJ1 99 aa4.65□□□□□ -1.67
GTF3A-206ENST00000470606 NDUFB1O75438 58 aa4.64□□□□□ -1.67
GTF3A-206ENST00000470606 CASC2Q6XLA1 102 aa4.63□□□□□ -1.67
GTF3A-206ENST00000470606 ANAPC13Q9BS18 74 aa4.63□□□□□ -1.67
GTF3A-206ENST00000470606 OCR1Q9BZK8 76 aa4.63□□□□□ -1.67
GTF3A-206ENST00000470606 hDV103S1A0JD37 113 aa4.62□□□□□ -1.67
GTF3A-206ENST00000470606 KRTAP16-1A8MUX0 517 aa4.62□□□□□ -1.67
GTF3A-206ENST00000470606 ATOX1O00244 68 aa4.62□□□□□ -1.67
GTF3A-206ENST00000470606 OXTP01178 125 aa4.62□□□□□ -1.67
GTF3A-206ENST00000470606 CCDC179H3BU77 68 aa4.59□□□□□ -1.67
GTF3A-206ENST00000470606 LINC00313P59037 77 aa4.59□□□□□ -1.67
GTF3A-206ENST00000470606 SERP2Q8N6R1 65 aa4.59□□□□□ -1.67
GTF3A-206ENST00000470606 TRAV7A0A075B6U4 112 aa4.58□□□□□ -1.68
GTF3A-206ENST00000470606 MRPL34Q9BQ48 92 aaKnown RBP4.58□□□□□ -1.68
GTF3A-206ENST00000470606 CYSTM1Q9H1C7 97 aa4.58□□□□□ -1.68
GTF3A-206ENST00000470606 C8orf87E5RJ46 101 aa4.57□□□□□ -1.68
GTF3A-206ENST00000470606 COX7CP15954 63 aa4.57□□□□□ -1.68
GTF3A-206ENST00000470606 TMEM254Q8TBM7 123 aa4.57□□□□□ -1.68
GTF3A-206ENST00000470606 C9orf92A6NGG3 77 aa4.56□□□□□ -1.68
GTF3A-206ENST00000470606 KRTAP4-8Q9BYQ9 185 aa4.56□□□□□ -1.68
GTF3A-206ENST00000470606 Q8N9P0 234 aaPredicted RBP4.56□□□□□ -1.68
GTF3A-206ENST00000470606 HERC1Q15751 4861 aa4.55□□□□□ -1.68
GTF3A-206ENST00000470606 Q5W150 140 aa4.54□□□□□ -1.68
GTF3A-206ENST00000470606 LPAP08519 4548 aa4.54□□□□□ -1.68
GTF3A-206ENST00000470606 UQCRQO14949 82 aa4.54□□□□□ -1.68
GTF3A-206ENST00000470606 KRTAP13-3Q3SY46 172 aa4.54□□□□□ -1.68
GTF3A-206ENST00000470606 SMIM20Q8N5G0 67 aa4.54□□□□□ -1.68
GTF3A-206ENST00000470606 IGLV7-46A0A075B6I9 117 aa4.52□□□□□ -1.69
GTF3A-206ENST00000470606 NDUFS5O43920 106 aa4.52□□□□□ -1.69
GTF3A-206ENST00000470606 FP248Q71RG6 208 aaPredicted RBP4.52□□□□□ -1.69
GTF3A-206ENST00000470606 C20orf197Q8N268 126 aa4.52□□□□□ -1.69
GTF3A-206ENST00000470606 LRP2P98164 4655 aa4.52□□□□□ -1.69
GTF3A-206ENST00000470606 KRTAP9-6A0A140TA67 174 aa4.51□□□□□ -1.69
GTF3A-206ENST00000470606 SNURFQ9Y675 71 aa4.51□□□□□ -1.69
GTF3A-206ENST00000470606 A0A0U1RQV1 116 aa4.5□□□□□ -1.69
GTF3A-206ENST00000470606 PRR4Q16378 134 aa4.5□□□□□ -1.69
GTF3A-206ENST00000470606 C20orf166-AS1Q96NR2 134 aa4.5□□□□□ -1.69
GTF3A-206ENST00000470606 A8MUU9 505 aa4.49□□□□□ -1.69
GTF3A-206ENST00000470606 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.49□□□□□ -1.69
GTF3A-206ENST00000470606 LCE2BO14633 110 aa4.49□□□□□ -1.69
GTF3A-206ENST00000470606 ZCCHC13Q8WW36 166 aaKnown RBP4.49□□□□□ -1.69
GTF3A-206ENST00000470606 TP53AIP1Q9HCN2 124 aa4.49□□□□□ -1.69
GTF3A-206ENST00000470606 TRAV22A0A0B4J277 110 aa4.48□□□□□ -1.69
GTF3A-206ENST00000470606 H0Y9P7 68 aa4.48□□□□□ -1.69
GTF3A-206ENST00000470606 KLKP1Q107X0 134 aa4.48□□□□□ -1.69
GTF3A-206ENST00000470606 C5orf47Q569G3 176 aa4.48□□□□□ -1.69
GTF3A-206ENST00000470606 KRTAP4-8A0A0G2JLE6 195 aa4.48□□□□□ -1.69
GTF3A-206ENST00000470606 SEC61GP60059 68 aa4.48□□□□□ -1.69
GTF3A-206ENST00000470606 LINC00208Q96KT6 92 aa4.46□□□□□ -1.69
GTF3A-206ENST00000470606 H7BZZ5 65 aa4.45□□□□□ -1.7
GTF3A-206ENST00000470606 TPRXLQ17RH7 258 aa4.44□□□□□ -1.7
GTF3A-206ENST00000470606 Q75L30 129 aa4.44□□□□□ -1.7
GTF3A-206ENST00000470606 MP68P56378 58 aa4.44□□□□□ -1.7
GTF3A-206ENST00000470606 C1orf64Q8NEQ6 169 aa4.44□□□□□ -1.7
GTF3A-206ENST00000470606 KRTAP9-2Q9BYQ4 174 aa4.44□□□□□ -1.7
GTF3A-206ENST00000470606 KRTAP4-7Q9BYR0 210 aa4.43□□□□□ -1.7
GTF3A-206ENST00000470606 HMCN2Q8NDA2 5059 aa4.42□□□□□ -1.7
GTF3A-206ENST00000470606 RPL37P61927 97 aaKnown RBP4.42□□□□□ -1.7
GTF3A-206ENST00000470606 H3BPC8 53 aa4.4□□□□□ -1.7
GTF3A-206ENST00000470606 CYP4F30PQ9H0H9 118 aa4.4□□□□□ -1.7
GTF3A-206ENST00000470606 IGKV2-30P06310 120 aa4.4□□□□□ -1.71
GTF3A-206ENST00000470606 PCOTHQ58A44 107 aa4.39□□□□□ -1.71
GTF3A-206ENST00000470606 IGKV2D-30A0A075B6S6 120 aa4.38□□□□□ -1.71
GTF3A-206ENST00000470606 LOC101927531A0A1B0GV80 90 aa4.38□□□□□ -1.71
GTF3A-206ENST00000470606 NDUFC1O43677 76 aa4.36□□□□□ -1.71
GTF3A-206ENST00000470606 ATP11AUNQ6ZP68 121 aa4.35□□□□□ -1.71
GTF3A-206ENST00000470606 SPINK7P58062 85 aa4.34□□□□□ -1.71
GTF3A-206ENST00000470606 HRES1P13985 223 aa4.34□□□□□ -1.71
GTF3A-206ENST00000470606 TMEM258P61165 79 aa4.34□□□□□ -1.71
GTF3A-206ENST00000470606 C7orf65Q6ZTY9 151 aa4.33□□□□□ -1.72
GTF3A-206ENST00000470606 MUC2Q02817 5179 aa4.33□□□□□ -1.72
GTF3A-206ENST00000470606 KRTAP4-1Q9BYQ7 146 aa4.32□□□□□ -1.72
GTF3A-206ENST00000470606 FAM236DA0A1B0GTK5 79 aa4.31□□□□□ -1.72
GTF3A-206ENST00000470606 FAM236CP0DP71 79 aa4.31□□□□□ -1.72
GTF3A-206ENST00000470606 SPANXA2-OT1Q8N9U9 137 aa4.31□□□□□ -1.72
GTF3A-206ENST00000470606 C4orf26Q17RF5 130 aa4.3□□□□□ -1.72
GTF3A-206ENST00000470606 LCE2CQ5TA81 110 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms