RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 A0A1B0GVX0 72 aa11.45□□□□□ -0.58
BRAF-202ENST00000469930 CXCL6P80162 114 aa11.45□□□□□ -0.58
BRAF-202ENST00000469930 UBR4Q5T4S7 5183 aa11.44□□□□□ -0.58
BRAF-202ENST00000469930 IGKV3D-7A0A0C4DH55 119 aa11.43□□□□□ -0.58
BRAF-202ENST00000469930 PRR15Q8IV56 129 aa11.43□□□□□ -0.58
BRAF-202ENST00000469930 C8orf87E5RJ46 101 aa11.42□□□□□ -0.58
BRAF-202ENST00000469930 ATP5EP2Q5VTU8 51 aa11.41□□□□□ -0.58
BRAF-202ENST00000469930 LINC00643Q86TS7 51 aa11.41□□□□□ -0.58
BRAF-202ENST00000469930 IGHV6-1A0A0B4J1U7 121 aa11.38□□□□□ -0.59
BRAF-202ENST00000469930 LINC00313P59037 77 aa11.38□□□□□ -0.59
BRAF-202ENST00000469930 C9orf92A6NGG3 77 aa11.36□□□□□ -0.59
BRAF-202ENST00000469930 K7EQZ3 153 aa11.36□□□□□ -0.59
BRAF-202ENST00000469930 CDIP1Q9H305 208 aa11.36□□□□□ -0.59
BRAF-202ENST00000469930 LPAP08519 4548 aa11.36□□□□□ -0.59
BRAF-202ENST00000469930 XP32Q5T750 250 aa11.34□□□□□ -0.59
BRAF-202ENST00000469930 NOTCH2NLQ7Z3S9 236 aa11.33□□□□□ -0.6
BRAF-202ENST00000469930 C8orf17Q9NRJ1 99 aa11.33□□□□□ -0.6
BRAF-202ENST00000469930 KRTAP16-1A8MUX0 517 aa11.31□□□□□ -0.6
BRAF-202ENST00000469930 Q8N9L7 120 aa11.28□□□□□ -0.6
BRAF-202ENST00000469930 C20orf166-AS1Q96NR2 134 aa11.28□□□□□ -0.6
BRAF-202ENST00000469930 LRP2P98164 4655 aa11.27□□□□□ -0.6
BRAF-202ENST00000469930 MMP24-AS1A0A0U1RRL7 71 aa11.27□□□□□ -0.61
BRAF-202ENST00000469930 A8MUU9 505 aa11.25□□□□□ -0.61
BRAF-202ENST00000469930 Q75L30 129 aa11.25□□□□□ -0.61
BRAF-202ENST00000469930 TMEM254Q8TBM7 123 aa11.24□□□□□ -0.61
BRAF-202ENST00000469930 RPL37P61927 97 aaKnown RBP11.22□□□□□ -0.61
BRAF-202ENST00000469930 Q8N9P0 234 aaPredicted RBP11.22□□□□□ -0.61
BRAF-202ENST00000469930 hDV103S1A0JD37 113 aa11.21□□□□□ -0.61
BRAF-202ENST00000469930 HCG22E2RYF7 251 aa11.19□□□□□ -0.62
BRAF-202ENST00000469930 MRPL34Q9BQ48 92 aaKnown RBP11.19□□□□□ -0.62
BRAF-202ENST00000469930 CASC2Q6XLA1 102 aa11.17□□□□□ -0.62
BRAF-202ENST00000469930 IMUPQ9GZP8 106 aa11.17□□□□□ -0.62
BRAF-202ENST00000469930 MUC17Q685J3 4493 aa11.15□□□□□ -0.62
BRAF-202ENST00000469930 SEC61BP60468 96 aaKnown RBP11.15□□□□□ -0.62
BRAF-202ENST00000469930 HIST1H4AP62805 103 aaKnown RBP11.15□□□□□ -0.62
BRAF-202ENST00000469930 WFDC13Q8IUB5 93 aa11.12□□□□□ -0.63
BRAF-202ENST00000469930 MT-ATP8P03928 68 aa11.09□□□□□ -0.63
BRAF-202ENST00000469930 ATP11AUNQ6ZP68 121 aa11.08□□□□□ -0.64
BRAF-202ENST00000469930 A0A087WVE0 104 aa11.05□□□□□ -0.64
BRAF-202ENST00000469930 PCOTHQ58A44 107 aa11.03□□□□□ -0.64
BRAF-202ENST00000469930 ZCCHC13Q8WW36 166 aaKnown RBP11.01□□□□□ -0.65
BRAF-202ENST00000469930 TP53AIP1Q9HCN2 124 aa11□□□□□ -0.65
BRAF-202ENST00000469930 NDUFS5O43920 106 aa10.99□□□□□ -0.65
BRAF-202ENST00000469930 RNF213Q63HN8 5207 aa10.95□□□□□ -0.66
BRAF-202ENST00000469930 Q5W150 140 aa10.89□□□□□ -0.67
BRAF-202ENST00000469930 UQCRQO14949 82 aa10.87□□□□□ -0.67
BRAF-202ENST00000469930 KRTAP4-1Q9BYQ7 146 aa10.87□□□□□ -0.67
BRAF-202ENST00000469930 OCR1Q9BZK8 76 aa10.86□□□□□ -0.67
BRAF-202ENST00000469930 SCGB1A1P11684 91 aa10.83□□□□□ -0.68
BRAF-202ENST00000469930 FAM236AA0A1B0GUQ0 79 aa10.82□□□□□ -0.68
BRAF-202ENST00000469930 FAM236BA0A1B0GV22 79 aa10.82□□□□□ -0.68
BRAF-202ENST00000469930 SMIM20Q8N5G0 67 aa10.8□□□□□ -0.68
BRAF-202ENST00000469930 TRAV22A0A0B4J277 110 aa10.78□□□□□ -0.68
BRAF-202ENST00000469930 SPINK7P58062 85 aa10.77□□□□□ -0.69
BRAF-202ENST00000469930 ATOX1O00244 68 aa10.74□□□□□ -0.69
BRAF-202ENST00000469930 C5orf47Q569G3 176 aa10.74□□□□□ -0.69
BRAF-202ENST00000469930 C7orf65Q6ZTY9 151 aa10.72□□□□□ -0.69
BRAF-202ENST00000469930 TRAV7A0A075B6U4 112 aa10.71□□□□□ -0.69
BRAF-202ENST00000469930 IGKV2-30P06310 120 aa10.71□□□□□ -0.69
BRAF-202ENST00000469930 H0Y9P7 68 aa10.7□□□□□ -0.7
BRAF-202ENST00000469930 MUC2Q02817 5179 aa10.68□□□□□ -0.7
BRAF-202ENST00000469930 HRES1P13985 223 aa10.68□□□□□ -0.7
BRAF-202ENST00000469930 LOC101927531A0A1B0GV80 90 aa10.67□□□□□ -0.7
BRAF-202ENST00000469930 H3BPC8 53 aa10.67□□□□□ -0.7
BRAF-202ENST00000469930 IGKV2D-30A0A075B6S6 120 aa10.66□□□□□ -0.7
BRAF-202ENST00000469930 MP68P56378 58 aa10.66□□□□□ -0.7
BRAF-202ENST00000469930 MPLKIPQ8TAP9 179 aa10.66□□□□□ -0.7
BRAF-202ENST00000469930 CYP4F30PQ9H0H9 118 aa10.63□□□□□ -0.71
BRAF-202ENST00000469930 SERP2Q8N6R1 65 aa10.6□□□□□ -0.71
BRAF-202ENST00000469930 C1orf64Q8NEQ6 169 aa10.6□□□□□ -0.71
BRAF-202ENST00000469930 KRTAP19-2Q3LHN2 52 aa10.59□□□□□ -0.71
BRAF-202ENST00000469930 LINC00208Q96KT6 92 aa10.59□□□□□ -0.71
BRAF-202ENST00000469930 A0A0U1RQV1 116 aa10.58□□□□□ -0.72
BRAF-202ENST00000469930 RBM12B-AS1Q9P1G2 102 aa10.56□□□□□ -0.72
BRAF-202ENST00000469930 KRTAP9-2Q9BYQ4 174 aa10.51□□□□□ -0.73
BRAF-202ENST00000469930 LCE2CQ5TA81 110 aa10.5□□□□□ -0.73
BRAF-202ENST00000469930 COX7CP15954 63 aa10.47□□□□□ -0.73
BRAF-202ENST00000469930 COX6B2Q6YFQ2 88 aa10.45□□□□□ -0.74
BRAF-202ENST00000469930 FAT4Q6V0I7 4981 aa10.44□□□□□ -0.74
BRAF-202ENST00000469930 C4orf26Q17RF5 130 aa10.43□□□□□ -0.74
BRAF-202ENST00000469930 KLKP1Q107X0 134 aa10.42□□□□□ -0.74
BRAF-202ENST00000469930 FAM236DA0A1B0GTK5 79 aa10.41□□□□□ -0.74
BRAF-202ENST00000469930 FAM236CP0DP71 79 aa10.41□□□□□ -0.74
BRAF-202ENST00000469930 ANAPC13Q9BS18 74 aa10.41□□□□□ -0.74
BRAF-202ENST00000469930 C20orf197Q8N268 126 aa10.38□□□□□ -0.75
BRAF-202ENST00000469930 KRTAP3-1Q9BYR8 98 aa10.35□□□□□ -0.75
BRAF-202ENST00000469930 KRTAP9-6A0A140TA67 174 aa10.34□□□□□ -0.75
BRAF-202ENST00000469930 H1FX-AS1Q4G0G2 97 aa10.34□□□□□ -0.75
BRAF-202ENST00000469930 SNURFQ9Y675 71 aa10.34□□□□□ -0.75
BRAF-202ENST00000469930 FLGP20930 4061 aaPredicted RBP10.33□□□□□ -0.76
BRAF-202ENST00000469930 MT1HP80294 61 aa10.3□□□□□ -0.76
BRAF-202ENST00000469930 A8MUN3 132 aa10.29□□□□□ -0.76
BRAF-202ENST00000469930 LCE2AQ5TA79 106 aaPredicted RBP10.29□□□□□ -0.76
BRAF-202ENST00000469930 NDUFC1O43677 76 aa10.25□□□□□ -0.77
BRAF-202ENST00000469930 SPANXA2-OT1Q8N9U9 137 aa10.23□□□□□ -0.77
BRAF-202ENST00000469930 DMAC1Q96GE9 116 aa10.2□□□□□ -0.78
BRAF-202ENST00000469930 CCDC179H3BU77 68 aa10.17□□□□□ -0.78
BRAF-202ENST00000469930 H7BZZ5 65 aa10.15□□□□□ -0.78
BRAF-202ENST00000469930 CYSTM1Q9H1C7 97 aa10.13□□□□□ -0.79
BRAF-202ENST00000469930 S4R3F8 94 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms