RNA–Protein interactions for RNA: ENST00000469275.5

PRKD3-207, Transcript of protein kinase D3, humanhuman

TSL 2

Gene PRKD3, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-207ENST00000469275 SMR3BP02814 79 aaPredicted RBP3.54□□□□□ -1.84
PRKD3-207ENST00000469275 LINC00336Q6ZUF6 198 aa3.54□□□□□ -1.84
PRKD3-207ENST00000469275 KMT2CQ8NEZ4 4911 aaKnown RBP3.53□□□□□ -1.84
PRKD3-207ENST00000469275 NDUFS5O43920 106 aa3.53□□□□□ -1.84
PRKD3-207ENST00000469275 NDUFB1O75438 58 aa3.53□□□□□ -1.84
PRKD3-207ENST00000469275 LINC00208Q96KT6 92 aa3.53□□□□□ -1.84
PRKD3-207ENST00000469275 MMP24-AS1A0A0U1RRL7 71 aa3.53□□□□□ -1.84
PRKD3-207ENST00000469275 KRTAP9-6A0A140TA67 174 aa3.53□□□□□ -1.84
PRKD3-207ENST00000469275 KRTAP29-1A8MX34 341 aaPredicted RBP3.53□□□□□ -1.84
PRKD3-207ENST00000469275 KRTAP5-3Q6L8H2 238 aa3.53□□□□□ -1.84
PRKD3-207ENST00000469275 hDV103S1A0JD37 113 aa3.52□□□□□ -1.85
PRKD3-207ENST00000469275 CDK2AP2O75956 126 aa3.51□□□□□ -1.85
PRKD3-207ENST00000469275 Q6ZSA8 131 aa3.51□□□□□ -1.85
PRKD3-207ENST00000469275 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
PRKD3-207ENST00000469275 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.51□□□□□ -1.85
PRKD3-207ENST00000469275 H0Y9P7 68 aa3.51□□□□□ -1.85
PRKD3-207ENST00000469275 KRTAP13-2Q52LG2 175 aa3.51□□□□□ -1.85
PRKD3-207ENST00000469275 FAT1Q14517 4588 aa3.51□□□□□ -1.85
PRKD3-207ENST00000469275 NDUFC1O43677 76 aa3.5□□□□□ -1.85
PRKD3-207ENST00000469275 MP68P56378 58 aa3.5□□□□□ -1.85
PRKD3-207ENST00000469275 SEC61GP60059 68 aa3.5□□□□□ -1.85
PRKD3-207ENST00000469275 FAM229BQ4G0N7 80 aa3.5□□□□□ -1.85
PRKD3-207ENST00000469275 C8orf17Q9NRJ1 99 aa3.5□□□□□ -1.85
PRKD3-207ENST00000469275 A0A1B0GVX0 72 aa3.49□□□□□ -1.85
PRKD3-207ENST00000469275 C4orf26Q17RF5 130 aa3.49□□□□□ -1.85
PRKD3-207ENST00000469275 RPS28P62857 69 aaKnown RBP3.49□□□□□ -1.85
PRKD3-207ENST00000469275 PCOTHQ58A44 107 aa3.49□□□□□ -1.85
PRKD3-207ENST00000469275 DYNC1H1Q14204 4646 aaKnown RBP3.48□□□□□ -1.85
PRKD3-207ENST00000469275 LCE3BQ5TA77 95 aa3.48□□□□□ -1.85
PRKD3-207ENST00000469275 ZCCHC13Q8WW36 166 aaKnown RBP3.48□□□□□ -1.85
PRKD3-207ENST00000469275 RETNLBQ9BQ08 111 aa3.48□□□□□ -1.85
PRKD3-207ENST00000469275 SERP1Q9Y6X1 66 aa3.48□□□□□ -1.85
PRKD3-207ENST00000469275 C1orf64Q8NEQ6 169 aa3.47□□□□□ -1.85
PRKD3-207ENST00000469275 MPLKIPQ8TAP9 179 aa3.47□□□□□ -1.85
PRKD3-207ENST00000469275 TRAV22A0A0B4J277 110 aa3.47□□□□□ -1.85
PRKD3-207ENST00000469275 KRTAP1-4P0C5Y4 121 aa3.47□□□□□ -1.85
PRKD3-207ENST00000469275 KRTAP4-8A0A0G2JLE6 195 aa3.46□□□□□ -1.86
PRKD3-207ENST00000469275 Q5XG85 94 aa3.46□□□□□ -1.86
PRKD3-207ENST00000469275 SSBP3-AS1Q7Z2R9 100 aa3.46□□□□□ -1.86
PRKD3-207ENST00000469275 RYR2Q92736 4967 aa3.45□□□□□ -1.86
PRKD3-207ENST00000469275 FP248Q71RG6 208 aaPredicted RBP3.45□□□□□ -1.86
PRKD3-207ENST00000469275 PRR26Q8N8Z3 221 aa3.45□□□□□ -1.86
PRKD3-207ENST00000469275 MRPL34Q9BQ48 92 aaKnown RBP3.45□□□□□ -1.86
PRKD3-207ENST00000469275 TYMSOSQ8TAI1 123 aa3.45□□□□□ -1.86
PRKD3-207ENST00000469275 C1orf195Q5TG92 126 aa3.44□□□□□ -1.86
PRKD3-207ENST00000469275 RYR3Q15413 4870 aa3.44□□□□□ -1.86
PRKD3-207ENST00000469275 Q5W150 140 aa3.43□□□□□ -1.86
PRKD3-207ENST00000469275 APOBP04114 4563 aaKnown RBP3.43□□□□□ -1.86
PRKD3-207ENST00000469275 ATP5EP56381 51 aaPredicted RBP3.43□□□□□ -1.86
PRKD3-207ENST00000469275 ASB16-AS1Q495Z4 193 aa3.43□□□□□ -1.86
PRKD3-207ENST00000469275 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
PRKD3-207ENST00000469275 LINC00313P59037 77 aa3.42□□□□□ -1.86
PRKD3-207ENST00000469275 SMIM26A0A096LP01 95 aa3.41□□□□□ -1.86
PRKD3-207ENST00000469275 CD164Q04900 197 aa3.41□□□□□ -1.86
PRKD3-207ENST00000469275 A0A1B0GVY2 172 aa3.41□□□□□ -1.86
PRKD3-207ENST00000469275 FLG2Q5D862 2391 aaPredicted RBP3.41□□□□□ -1.86
PRKD3-207ENST00000469275 TP53AIP1Q9HCN2 124 aa3.4□□□□□ -1.86
PRKD3-207ENST00000469275 LRP1Q07954 4544 aaKnown RBP3.39□□□□□ -1.87
PRKD3-207ENST00000469275 Q8N9P0 234 aaPredicted RBP3.39□□□□□ -1.87
PRKD3-207ENST00000469275 KRTAP4-7Q9BYR0 210 aa3.39□□□□□ -1.87
PRKD3-207ENST00000469275 H3BPC8 53 aa3.38□□□□□ -1.87
PRKD3-207ENST00000469275 PSPHP1O15172 72 aa3.38□□□□□ -1.87
PRKD3-207ENST00000469275 LINC00304Q8N9R0 145 aa3.38□□□□□ -1.87
PRKD3-207ENST00000469275 LIMD2Q9BT23 127 aa3.38□□□□□ -1.87
PRKD3-207ENST00000469275 V9GYY9 64 aa3.38□□□□□ -1.87
PRKD3-207ENST00000469275 C9orf92A6NGG3 77 aa3.37□□□□□ -1.87
PRKD3-207ENST00000469275 KRTAP9-9Q9BYP9 154 aa3.37□□□□□ -1.87
PRKD3-207ENST00000469275 KRTAP9-4Q9BYQ2 154 aa3.37□□□□□ -1.87
PRKD3-207ENST00000469275 CYP4F30PQ9H0H9 118 aa3.37□□□□□ -1.87
PRKD3-207ENST00000469275 DMBT1Q9UGM3 2413 aaPredicted RBP3.36□□□□□ -1.87
PRKD3-207ENST00000469275 C8orf87E5RJ46 101 aa3.36□□□□□ -1.87
PRKD3-207ENST00000469275 SPINK1P00995 79 aa3.36□□□□□ -1.87
PRKD3-207ENST00000469275 PKHD1L1Q86WI1 4243 aa3.36□□□□□ -1.87
PRKD3-207ENST00000469275 IGKV2D-30A0A075B6S6 120 aa3.36□□□□□ -1.87
PRKD3-207ENST00000469275 IGKV2-30P06310 120 aa3.36□□□□□ -1.87
PRKD3-207ENST00000469275 KRTAP10-4P60372 401 aaPredicted RBP3.36□□□□□ -1.87
PRKD3-207ENST00000469275 COA5Q86WW8 74 aa3.36□□□□□ -1.87
PRKD3-207ENST00000469275 IGLV7-46A0A075B6I9 117 aa3.35□□□□□ -1.87
PRKD3-207ENST00000469275 KRTAP16-1A8MUX0 517 aa3.35□□□□□ -1.87
PRKD3-207ENST00000469275 SPANXA2-OT1Q8N9U9 137 aa3.35□□□□□ -1.87
PRKD3-207ENST00000469275 KRTAP13-3Q3SY46 172 aa3.35□□□□□ -1.87
PRKD3-207ENST00000469275 LCE1DQ5T752 114 aa3.35□□□□□ -1.87
PRKD3-207ENST00000469275 PRO0628Q9UI54 55 aa3.35□□□□□ -1.87
PRKD3-207ENST00000469275 HSPG2P98160 4391 aa3.34□□□□□ -1.87
PRKD3-207ENST00000469275 BRK1Q8WUW1 75 aa3.34□□□□□ -1.88
PRKD3-207ENST00000469275 MYCBP2O75592 4640 aa3.33□□□□□ -1.88
PRKD3-207ENST00000469275 KIAA1109Q2LD37 5005 aa3.33□□□□□ -1.88
PRKD3-207ENST00000469275 LOC101927531A0A1B0GV80 90 aa3.33□□□□□ -1.88
PRKD3-207ENST00000469275 A8MUN3 132 aa3.33□□□□□ -1.88
PRKD3-207ENST00000469275 HRES1P13985 223 aa3.33□□□□□ -1.88
PRKD3-207ENST00000469275 SPAG11AQ6PDA7 123 aa3.32□□□□□ -1.88
PRKD3-207ENST00000469275 EPPK1P58107 5090 aaKnown RBP3.31□□□□□ -1.88
PRKD3-207ENST00000469275 Q5VSD8 79 aa3.31□□□□□ -1.88
PRKD3-207ENST00000469275 Q1T7F1 81 aa3.3□□□□□ -1.88
PRKD3-207ENST00000469275 KRTAP19-1Q8IUB9 90 aa3.3□□□□□ -1.88
PRKD3-207ENST00000469275 PRR15LQ9BU68 103 aa3.3□□□□□ -1.88
PRKD3-207ENST00000469275 A8MU10 97 aa3.29□□□□□ -1.88
PRKD3-207ENST00000469275 Q8N1X5 172 aa3.29□□□□□ -1.88
PRKD3-207ENST00000469275 KRTAP4-9Q9BYQ8 210 aa3.29□□□□□ -1.88
PRKD3-207ENST00000469275 TNXBP22105 4242 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms