RNA–Protein interactions for RNA: ENST00000468777.5

PCCB-208, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-208ENST00000468777 SS18L2Q9UHA2 77 aa10.8□□□□□ -0.68
PCCB-208ENST00000468777 IGKV4-1P06312 121 aa10.78□□□□□ -0.68
PCCB-208ENST00000468777 DSCR10P59022 87 aa10.78□□□□□ -0.68
PCCB-208ENST00000468777 LINC00472Q9H8W2 130 aa10.78□□□□□ -0.68
PCCB-208ENST00000468777 LIMD2Q9BT23 127 aa10.78□□□□□ -0.68
PCCB-208ENST00000468777 UBR4Q5T4S7 5183 aa10.73□□□□□ -0.69
PCCB-208ENST00000468777 K7EQZ3 153 aa10.73□□□□□ -0.69
PCCB-208ENST00000468777 IGLV7-46A0A075B6I9 117 aa10.72□□□□□ -0.69
PCCB-208ENST00000468777 ATOX1O00244 68 aa10.72□□□□□ -0.69
PCCB-208ENST00000468777 Q96NJ1 140 aa10.72□□□□□ -0.69
PCCB-208ENST00000468777 J3KT08 172 aa10.71□□□□□ -0.69
PCCB-208ENST00000468777 Q5XG85 94 aa10.7□□□□□ -0.7
PCCB-208ENST00000468777 CCDC179H3BU77 68 aa10.7□□□□□ -0.7
PCCB-208ENST00000468777 SVIPQ8NHG7 77 aa10.7□□□□□ -0.7
PCCB-208ENST00000468777 FP248Q71RG6 208 aaPredicted RBP10.68□□□□□ -0.7
PCCB-208ENST00000468777 A8MWP4 228 aa10.68□□□□□ -0.7
PCCB-208ENST00000468777 C1orf195Q5TG92 126 aa10.66□□□□□ -0.7
PCCB-208ENST00000468777 ASB16-AS1Q495Z4 193 aa10.64□□□□□ -0.71
PCCB-208ENST00000468777 PRR15Q8IV56 129 aa10.64□□□□□ -0.71
PCCB-208ENST00000468777 NDUFB1O75438 58 aa10.63□□□□□ -0.71
PCCB-208ENST00000468777 TPRXLQ17RH7 258 aa10.61□□□□□ -0.71
PCCB-208ENST00000468777 HCG22E2RYF7 251 aa10.6□□□□□ -0.71
PCCB-208ENST00000468777 KRTAP13-3Q3SY46 172 aa10.58□□□□□ -0.72
PCCB-208ENST00000468777 SERP2Q8N6R1 65 aa10.58□□□□□ -0.72
PCCB-208ENST00000468777 SMIM20Q8N5G0 67 aa10.57□□□□□ -0.72
PCCB-208ENST00000468777 UQCRQO14949 82 aa10.55□□□□□ -0.72
PCCB-208ENST00000468777 COX7CP15954 63 aa10.55□□□□□ -0.72
PCCB-208ENST00000468777 A0A1B0GVX0 72 aa10.54□□□□□ -0.72
PCCB-208ENST00000468777 WFDC13Q8IUB5 93 aa10.54□□□□□ -0.72
PCCB-208ENST00000468777 TRAV7A0A075B6U4 112 aa10.53□□□□□ -0.72
PCCB-208ENST00000468777 IGHV6-1A0A0B4J1U7 121 aa10.52□□□□□ -0.73
PCCB-208ENST00000468777 C9orf92A6NGG3 77 aa10.52□□□□□ -0.73
PCCB-208ENST00000468777 CASC2Q6XLA1 102 aa10.52□□□□□ -0.73
PCCB-208ENST00000468777 RNF213Q63HN8 5207 aa10.51□□□□□ -0.73
PCCB-208ENST00000468777 MMP24-AS1A0A0U1RRL7 71 aa10.51□□□□□ -0.73
PCCB-208ENST00000468777 OCR1Q9BZK8 76 aa10.49□□□□□ -0.73
PCCB-208ENST00000468777 C8orf17Q9NRJ1 99 aa10.49□□□□□ -0.73
PCCB-208ENST00000468777 hDV103S1A0JD37 113 aa10.47□□□□□ -0.73
PCCB-208ENST00000468777 XP32Q5T750 250 aa10.44□□□□□ -0.74
PCCB-208ENST00000468777 NOTCH2NLQ7Z3S9 236 aa10.42□□□□□ -0.74
PCCB-208ENST00000468777 MUC2Q02817 5179 aa10.42□□□□□ -0.74
PCCB-208ENST00000468777 C8orf87E5RJ46 101 aa10.4□□□□□ -0.74
PCCB-208ENST00000468777 MUC17Q685J3 4493 aa10.39□□□□□ -0.75
PCCB-208ENST00000468777 C20orf197Q8N268 126 aa10.38□□□□□ -0.75
PCCB-208ENST00000468777 TMEM254Q8TBM7 123 aa10.38□□□□□ -0.75
PCCB-208ENST00000468777 LINC00313P59037 77 aa10.37□□□□□ -0.75
PCCB-208ENST00000468777 MRPL34Q9BQ48 92 aaKnown RBP10.37□□□□□ -0.75
PCCB-208ENST00000468777 C5orf47Q569G3 176 aa10.32□□□□□ -0.76
PCCB-208ENST00000468777 NDUFS5O43920 106 aa10.3□□□□□ -0.76
PCCB-208ENST00000468777 KLKP1Q107X0 134 aa10.3□□□□□ -0.76
PCCB-208ENST00000468777 TP53AIP1Q9HCN2 124 aa10.3□□□□□ -0.76
PCCB-208ENST00000468777 CYSTM1Q9H1C7 97 aa10.29□□□□□ -0.76
PCCB-208ENST00000468777 SNURFQ9Y675 71 aa10.29□□□□□ -0.76
PCCB-208ENST00000468777 TMEM258P61165 79 aa10.26□□□□□ -0.77
PCCB-208ENST00000468777 A0A0U1RQV1 116 aa10.25□□□□□ -0.77
PCCB-208ENST00000468777 SEC61BP60468 96 aaKnown RBP10.25□□□□□ -0.77
PCCB-208ENST00000468777 MP68P56378 58 aa10.24□□□□□ -0.77
PCCB-208ENST00000468777 KRTAP16-1A8MUX0 517 aa10.23□□□□□ -0.77
PCCB-208ENST00000468777 RPL37P61927 97 aaKnown RBP10.23□□□□□ -0.77
PCCB-208ENST00000468777 H0Y9P7 68 aa10.23□□□□□ -0.77
PCCB-208ENST00000468777 TRAV22A0A0B4J277 110 aa10.22□□□□□ -0.77
PCCB-208ENST00000468777 Q8N9P0 234 aaPredicted RBP10.22□□□□□ -0.77
PCCB-208ENST00000468777 PCOTHQ58A44 107 aa10.21□□□□□ -0.77
PCCB-208ENST00000468777 RPS28P62857 69 aaKnown RBP10.2□□□□□ -0.78
PCCB-208ENST00000468777 H3BPC8 53 aa10.18□□□□□ -0.78
PCCB-208ENST00000468777 Q75L30 129 aa10.18□□□□□ -0.78
PCCB-208ENST00000468777 LINC00208Q96KT6 92 aa10.18□□□□□ -0.78
PCCB-208ENST00000468777 H7BZZ5 65 aa10.17□□□□□ -0.78
PCCB-208ENST00000468777 NDUFC1O43677 76 aa10.17□□□□□ -0.78
PCCB-208ENST00000468777 ZCCHC13Q8WW36 166 aaKnown RBP10.17□□□□□ -0.78
PCCB-208ENST00000468777 C20orf166-AS1Q96NR2 134 aa10.17□□□□□ -0.78
PCCB-208ENST00000468777 KRTAP4-1Q9BYQ7 146 aa10.16□□□□□ -0.78
PCCB-208ENST00000468777 A8MUU9 505 aa10.15□□□□□ -0.79
PCCB-208ENST00000468777 C1orf64Q8NEQ6 169 aa10.13□□□□□ -0.79
PCCB-208ENST00000468777 Q5W150 140 aa10.13□□□□□ -0.79
PCCB-208ENST00000468777 ATP11AUNQ6ZP68 121 aa10.1□□□□□ -0.79
PCCB-208ENST00000468777 FAM236DA0A1B0GTK5 79 aa10.04□□□□□ -0.8
PCCB-208ENST00000468777 FAM236CP0DP71 79 aa10.04□□□□□ -0.8
PCCB-208ENST00000468777 FAT4Q6V0I7 4981 aa10.03□□□□□ -0.8
PCCB-208ENST00000468777 LOC101927531A0A1B0GV80 90 aa10.02□□□□□ -0.8
PCCB-208ENST00000468777 ATP5EP56381 51 aaPredicted RBP9.96□□□□□ -0.81
PCCB-208ENST00000468777 SERP1Q9Y6X1 66 aa9.96□□□□□ -0.82
PCCB-208ENST00000468777 CYP4F30PQ9H0H9 118 aa9.95□□□□□ -0.82
PCCB-208ENST00000468777 IGKV2-30P06310 120 aa9.93□□□□□ -0.82
PCCB-208ENST00000468777 SPANXA2-OT1Q8N9U9 137 aa9.9□□□□□ -0.82
PCCB-208ENST00000468777 IGKV2D-30A0A075B6S6 120 aa9.88□□□□□ -0.83
PCCB-208ENST00000468777 KRTAP19-2Q3LHN2 52 aa9.83□□□□□ -0.84
PCCB-208ENST00000468777 C7orf65Q6ZTY9 151 aa9.83□□□□□ -0.84
PCCB-208ENST00000468777 HRES1P13985 223 aa9.79□□□□□ -0.84
PCCB-208ENST00000468777 SMIM26A0A096LP01 95 aa9.79□□□□□ -0.84
PCCB-208ENST00000468777 LCE2CQ5TA81 110 aa9.78□□□□□ -0.84
PCCB-208ENST00000468777 SPINK7P58062 85 aa9.76□□□□□ -0.85
PCCB-208ENST00000468777 C4orf26Q17RF5 130 aa9.76□□□□□ -0.85
PCCB-208ENST00000468777 COX6B2Q6YFQ2 88 aa9.72□□□□□ -0.85
PCCB-208ENST00000468777 LCE2AQ5TA79 106 aaPredicted RBP9.7□□□□□ -0.86
PCCB-208ENST00000468777 FLGP20930 4061 aaPredicted RBP9.67□□□□□ -0.86
PCCB-208ENST00000468777 MPLKIPQ8TAP9 179 aa9.65□□□□□ -0.86
PCCB-208ENST00000468777 DMAC1Q96GE9 116 aa9.65□□□□□ -0.86
PCCB-208ENST00000468777 MT1HP80294 61 aa9.63□□□□□ -0.87
PCCB-208ENST00000468777 ACYP2P14621 99 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms