RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 PRKDCP78527 4128 aaKnown RBP0.92□□□□□ -2.26
CDHR3-206ENST00000468477 APCP25054 2843 aa0.92□□□□□ -2.26
CDHR3-206ENST00000468477 KRTAP19-3Q7Z4W3 81 aa0.92□□□□□ -2.26
CDHR3-206ENST00000468477 TNXBP22105 4242 aa0.92□□□□□ -2.26
CDHR3-206ENST00000468477 LYSTQ99698 3801 aa0.91□□□□□ -2.26
CDHR3-206ENST00000468477 FBN3Q75N90 2809 aa0.91□□□□□ -2.26
CDHR3-206ENST00000468477 CHD7Q9P2D1 2997 aa0.91□□□□□ -2.26
CDHR3-206ENST00000468477 ZNF469Q96JG9 3925 aaPredicted RBP0.9□□□□□ -2.26
CDHR3-206ENST00000468477 H3BNG1 76 aa0.9□□□□□ -2.27
CDHR3-206ENST00000468477 PRM1P04553 51 aa0.9□□□□□ -2.27
CDHR3-206ENST00000468477 UNC79Q9P2D8 2635 aa0.9□□□□□ -2.27
CDHR3-206ENST00000468477 GCN1Q92616 2671 aaKnown RBP0.9□□□□□ -2.27
CDHR3-206ENST00000468477 FAT2Q9NYQ8 4349 aa0.89□□□□□ -2.27
CDHR3-206ENST00000468477 C9orf92A6NGG3 77 aa0.89□□□□□ -2.27
CDHR3-206ENST00000468477 K7EIM0 57 aa0.89□□□□□ -2.27
CDHR3-206ENST00000468477 TNP1P09430 55 aa0.89□□□□□ -2.27
CDHR3-206ENST00000468477 ACANP16112 2415 aa0.89□□□□□ -2.27
CDHR3-206ENST00000468477 SPTBN4Q9H254 2564 aa0.89□□□□□ -2.27
CDHR3-206ENST00000468477 RIF1Q5UIP0 2472 aaKnown RBP0.89□□□□□ -2.27
CDHR3-206ENST00000468477 APC2O95996 2303 aa0.88□□□□□ -2.27
CDHR3-206ENST00000468477 TMEM167AQ8TBQ9 72 aa0.88□□□□□ -2.27
CDHR3-206ENST00000468477 PDZD2O15018 2839 aa0.88□□□□□ -2.27
CDHR3-206ENST00000468477 LRRK2Q5S007 2527 aa0.87□□□□□ -2.27
CDHR3-206ENST00000468477 VPS13BQ7Z7G8 4022 aa0.87□□□□□ -2.27
CDHR3-206ENST00000468477 TENM2Q9NT68 2774 aa0.86□□□□□ -2.27
CDHR3-206ENST00000468477 MTORP42345 2549 aa0.86□□□□□ -2.27
CDHR3-206ENST00000468477 NOTCH1P46531 2555 aa0.86□□□□□ -2.27
CDHR3-206ENST00000468477 USP24Q9UPU5 2620 aa0.86□□□□□ -2.27
CDHR3-206ENST00000468477 PKD1L1Q8TDX9 2849 aa0.86□□□□□ -2.27
CDHR3-206ENST00000468477 SETXQ7Z333 2677 aaKnown RBP0.85□□□□□ -2.27
CDHR3-206ENST00000468477 NF1P21359 2839 aa0.85□□□□□ -2.27
CDHR3-206ENST00000468477 FAM186AA6NE01 2351 aa0.85□□□□□ -2.27
CDHR3-206ENST00000468477 EPG5Q9HCE0 2579 aa0.85□□□□□ -2.27
CDHR3-206ENST00000468477 FLNCQ14315 2725 aa0.84□□□□□ -2.27
CDHR3-206ENST00000468477 DEFB110Q30KQ9 67 aa0.84□□□□□ -2.27
CDHR3-206ENST00000468477 DNAH11Q96DT5 4516 aa0.83□□□□□ -2.28
CDHR3-206ENST00000468477 KMT2AQ03164 3969 aa0.82□□□□□ -2.28
CDHR3-206ENST00000468477 SPART-AS1P0CW21 52 aa0.82□□□□□ -2.28
CDHR3-206ENST00000468477 RPL39P5Q59GN2 51 aa0.82□□□□□ -2.28
CDHR3-206ENST00000468477 ZZEF1O43149 2961 aa0.81□□□□□ -2.28
CDHR3-206ENST00000468477 USP9YO00507 2555 aaPredicted RBP0.81□□□□□ -2.28
CDHR3-206ENST00000468477 ANKHD1Q8IWZ3 2542 aaKnown RBP0.8□□□□□ -2.28
CDHR3-206ENST00000468477 SACSQ9NZJ4 4579 aa0.8□□□□□ -2.28
CDHR3-206ENST00000468477 NCOR2Q9Y618 2525 aa0.8□□□□□ -2.28
CDHR3-206ENST00000468477 CRYBG3Q68DQ2 2970 aa0.8□□□□□ -2.28
CDHR3-206ENST00000468477 HUWE1Q7Z6Z7 4374 aaKnown RBP0.8□□□□□ -2.28
CDHR3-206ENST00000468477 NSD1Q96L73 2696 aaPredicted RBP0.79□□□□□ -2.28
CDHR3-206ENST00000468477 SPG11Q96JI7 2443 aa0.79□□□□□ -2.28
CDHR3-206ENST00000468477 STAB1Q9NY15 2570 aa0.79□□□□□ -2.28
CDHR3-206ENST00000468477 DEFB108AA8MXU0 73 aa0.78□□□□□ -2.28
CDHR3-206ENST00000468477 VPS13DQ5THJ4 4388 aa0.78□□□□□ -2.29
CDHR3-206ENST00000468477 FLNBO75369 2602 aaKnown RBP0.77□□□□□ -2.29
CDHR3-206ENST00000468477 CACNA1AO00555 2505 aa0.77□□□□□ -2.29
CDHR3-206ENST00000468477 TENM1Q9UKZ4 2725 aa0.77□□□□□ -2.29
CDHR3-206ENST00000468477 ACACBO00763 2458 aa0.76□□□□□ -2.29
CDHR3-206ENST00000468477 DMXL1Q9Y485 3027 aa0.76□□□□□ -2.29
CDHR3-206ENST00000468477 UTP20O75691 2785 aaKnown RBP0.76□□□□□ -2.29
CDHR3-206ENST00000468477 CEP250Q9BV73 2442 aa0.76□□□□□ -2.29
CDHR3-206ENST00000468477 NBEAL2Q6ZNJ1 2754 aa0.75□□□□□ -2.29
CDHR3-206ENST00000468477 DNAH3Q8TD57 4116 aa0.75□□□□□ -2.29
CDHR3-206ENST00000468477 COL12A1Q99715 3063 aa0.75□□□□□ -2.29
CDHR3-206ENST00000468477 TACC2O95359 2948 aa0.75□□□□□ -2.29
CDHR3-206ENST00000468477 MGAQ8IWI9 3026 aa0.74□□□□□ -2.29
CDHR3-206ENST00000468477 DCHS2Q6V1P9 2916 aa0.74□□□□□ -2.29
CDHR3-206ENST00000468477 ITPR3Q14573 2671 aa0.74□□□□□ -2.29
CDHR3-206ENST00000468477 ANKRD11Q6UB99 2663 aaPredicted RBP0.74□□□□□ -2.29
CDHR3-206ENST00000468477 TLN2Q9Y4G6 2542 aa0.73□□□□□ -2.29
CDHR3-206ENST00000468477 SPRR2DP22532 72 aa0.73□□□□□ -2.29
CDHR3-206ENST00000468477 FRYQ5TBA9 3013 aa0.73□□□□□ -2.29
CDHR3-206ENST00000468477 SONP18583 2426 aaKnown RBP0.73□□□□□ -2.29
CDHR3-206ENST00000468477 CUBNO60494 3623 aa0.72□□□□□ -2.29
CDHR3-206ENST00000468477 SPENQ96T58 3664 aaKnown RBP0.72□□□□□ -2.29
CDHR3-206ENST00000468477 PKD1P98161 4303 aa0.72□□□□□ -2.29
CDHR3-206ENST00000468477 MYCBP2O75592 4640 aa0.71□□□□□ -2.3
CDHR3-206ENST00000468477 RHPN1-AS1Q9BWJ2 59 aa0.71□□□□□ -2.3
CDHR3-206ENST00000468477 FASNP49327 2511 aaKnown RBP0.71□□□□□ -2.3
CDHR3-206ENST00000468477 NBPF19A0A087WUL8 3843 aa0.7□□□□□ -2.3
CDHR3-206ENST00000468477 ZFHX4Q86UP3 3567 aa0.7□□□□□ -2.3
CDHR3-206ENST00000468477 HIVEP1P15822 2718 aa0.7□□□□□ -2.3
CDHR3-206ENST00000468477 DYNC2H1Q8NCM8 4307 aaKnown RBP0.7□□□□□ -2.3
CDHR3-206ENST00000468477 DNAH7Q8WXX0 4024 aa0.7□□□□□ -2.3
CDHR3-206ENST00000468477 MYO18BQ8IUG5 2567 aa0.69□□□□□ -2.3
CDHR3-206ENST00000468477 A0A096LNI7 61 aa0.69□□□□□ -2.3
CDHR3-206ENST00000468477 H3BUX3 64 aa0.69□□□□□ -2.3
CDHR3-206ENST00000468477 SPRR2BP35325 72 aa0.69□□□□□ -2.3
CDHR3-206ENST00000468477 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
CDHR3-206ENST00000468477 HECTD4Q9Y4D8 3996 aa0.69□□□□□ -2.3
CDHR3-206ENST00000468477 USP9XQ93008 2570 aaPredicted RBP0.69□□□□□ -2.3
CDHR3-206ENST00000468477 ANK3Q12955 4377 aaKnown RBP0.68□□□□□ -2.3
CDHR3-206ENST00000468477 IGSF10Q6WRI0 2623 aa0.68□□□□□ -2.3
CDHR3-206ENST00000468477 KRTAP8-1Q8IUC2 63 aa0.68□□□□□ -2.3
CDHR3-206ENST00000468477 NBEAQ8NFP9 2946 aa0.68□□□□□ -2.3
CDHR3-206ENST00000468477 TEP1Q99973 2627 aaKnown RBP0.68□□□□□ -2.3
CDHR3-206ENST00000468477 DNAH2Q9P225 4427 aa0.68□□□□□ -2.3
CDHR3-206ENST00000468477 PKHD1L1Q86WI1 4243 aa0.68□□□□□ -2.3
CDHR3-206ENST00000468477 RANBP2P49792 3224 aaKnown RBP0.68□□□□□ -2.3
CDHR3-206ENST00000468477 CELSR3Q9NYQ7 3312 aa0.67□□□□□ -2.3
CDHR3-206ENST00000468477 SYNE1Q8NF91 8797 aaKnown RBP0.67□□□□□ -2.3
CDHR3-206ENST00000468477 APELAP0DMC3 54 aa0.67□□□□□ -2.3
CDHR3-206ENST00000468477 COL7A1Q02388 2944 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms