RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 C5orf42Q9H799 3197 aa1.29□□□□□ -2.2
SNX4-202ENST00000465505 RP1L1Q8IWN7 2480 aaPredicted RBP1.29□□□□□ -2.2
SNX4-202ENST00000465505 KRTAP6-3Q3LI67 103 aa1.29□□□□□ -2.2
SNX4-202ENST00000465505 EPG5Q9HCE0 2579 aa1.29□□□□□ -2.2
SNX4-202ENST00000465505 HIVEP3Q5T1R4 2406 aa1.28□□□□□ -2.2
SNX4-202ENST00000465505 SPG11Q96JI7 2443 aa1.28□□□□□ -2.2
SNX4-202ENST00000465505 HECTD1Q9ULT8 2610 aa1.28□□□□□ -2.2
SNX4-202ENST00000465505 VPS13AQ96RL7 3174 aa1.28□□□□□ -2.2
SNX4-202ENST00000465505 SPINK1P00995 79 aa1.28□□□□□ -2.2
SNX4-202ENST00000465505 KRTAP12-3P60328 96 aa1.28□□□□□ -2.2
SNX4-202ENST00000465505 AKAP13Q12802 2813 aa1.28□□□□□ -2.2
SNX4-202ENST00000465505 FRYQ5TBA9 3013 aa1.28□□□□□ -2.2
SNX4-202ENST00000465505 SZT2Q5T011 3432 aa1.27□□□□□ -2.21
SNX4-202ENST00000465505 DEFB110Q30KQ9 67 aa1.27□□□□□ -2.21
SNX4-202ENST00000465505 KRTAP4-1Q9BYQ7 146 aa1.27□□□□□ -2.21
SNX4-202ENST00000465505 LRBAP50851 2863 aa1.26□□□□□ -2.21
SNX4-202ENST00000465505 ATMQ13315 3056 aa1.26□□□□□ -2.21
SNX4-202ENST00000465505 M0QZ58 72 aa1.26□□□□□ -2.21
SNX4-202ENST00000465505 CHD9Q3L8U1 2897 aa1.26□□□□□ -2.21
SNX4-202ENST00000465505 LRRK2Q5S007 2527 aa1.26□□□□□ -2.21
SNX4-202ENST00000465505 SONP18583 2426 aaKnown RBP1.26□□□□□ -2.21
SNX4-202ENST00000465505 BOD1L1Q8NFC6 3051 aa1.26□□□□□ -2.21
SNX4-202ENST00000465505 DNAH8Q96JB1 4490 aa1.25□□□□□ -2.21
SNX4-202ENST00000465505 POLQO75417 2590 aa1.25□□□□□ -2.21
SNX4-202ENST00000465505 NCOR2Q9Y618 2525 aa1.25□□□□□ -2.21
SNX4-202ENST00000465505 PRKDCP78527 4128 aaKnown RBP1.25□□□□□ -2.21
SNX4-202ENST00000465505 BDP1A6H8Y1 2624 aa1.25□□□□□ -2.21
SNX4-202ENST00000465505 PIEZO1Q92508 2521 aa1.25□□□□□ -2.21
SNX4-202ENST00000465505 RELNP78509 3460 aa1.24□□□□□ -2.21
SNX4-202ENST00000465505 DCHS2Q6V1P9 2916 aa1.24□□□□□ -2.21
SNX4-202ENST00000465505 NF1P21359 2839 aa1.24□□□□□ -2.21
SNX4-202ENST00000465505 MAP1AP78559 2803 aaPredicted RBP1.24□□□□□ -2.21
SNX4-202ENST00000465505 ZFHX4Q86UP3 3567 aa1.24□□□□□ -2.21
SNX4-202ENST00000465505 ATRQ13535 2644 aa1.24□□□□□ -2.21
SNX4-202ENST00000465505 HELZ2Q9BYK8 2649 aaKnown RBP1.24□□□□□ -2.21
SNX4-202ENST00000465505 CELSR3Q9NYQ7 3312 aa1.23□□□□□ -2.21
SNX4-202ENST00000465505 A0A0D9SG42 100 aa1.23□□□□□ -2.21
SNX4-202ENST00000465505 ZZEF1O43149 2961 aa1.23□□□□□ -2.21
SNX4-202ENST00000465505 DEFB108BQ8NET1 73 aa1.23□□□□□ -2.21
SNX4-202ENST00000465505 DYNC2H1Q8NCM8 4307 aaKnown RBP1.23□□□□□ -2.21
SNX4-202ENST00000465505 CFAP47Q6ZTR5 3102 aa1.23□□□□□ -2.21
SNX4-202ENST00000465505 BSNQ9UPA5 3926 aa1.23□□□□□ -2.21
SNX4-202ENST00000465505 FBN3Q75N90 2809 aa1.23□□□□□ -2.21
SNX4-202ENST00000465505 COL12A1Q99715 3063 aa1.23□□□□□ -2.21
SNX4-202ENST00000465505 DNAH3Q8TD57 4116 aa1.23□□□□□ -2.21
SNX4-202ENST00000465505 DNAH7Q8WXX0 4024 aa1.23□□□□□ -2.21
SNX4-202ENST00000465505 CSMD3Q7Z407 3707 aa1.23□□□□□ -2.21
SNX4-202ENST00000465505 MKI67P46013 3256 aaKnown RBP1.22□□□□□ -2.21
SNX4-202ENST00000465505 SACSQ9NZJ4 4579 aa1.22□□□□□ -2.21
SNX4-202ENST00000465505 FCGBPQ9Y6R7 5405 aaPredicted RBP1.22□□□□□ -2.21
SNX4-202ENST00000465505 DMXL1Q9Y485 3027 aa1.22□□□□□ -2.21
SNX4-202ENST00000465505 USP9YO00507 2555 aaPredicted RBP1.21□□□□□ -2.22
SNX4-202ENST00000465505 SPEGQ15772 3267 aa1.21□□□□□ -2.22
SNX4-202ENST00000465505 USP24Q9UPU5 2620 aa1.21□□□□□ -2.22
SNX4-202ENST00000465505 KALRNO60229 2985 aa1.21□□□□□ -2.22
SNX4-202ENST00000465505 DNAH2Q9P225 4427 aa1.21□□□□□ -2.22
SNX4-202ENST00000465505 FRAS1Q86XX4 4008 aa1.2□□□□□ -2.22
SNX4-202ENST00000465505 HTN1P15515 57 aa1.2□□□□□ -2.22
SNX4-202ENST00000465505 DNAH12Q6ZR08 3092 aa1.2□□□□□ -2.22
SNX4-202ENST00000465505 VPS13BQ7Z7G8 4022 aa1.19□□□□□ -2.22
SNX4-202ENST00000465505 MYCBP2O75592 4640 aa1.19□□□□□ -2.22
SNX4-202ENST00000465505 CHD8Q9HCK8 2581 aa1.19□□□□□ -2.22
SNX4-202ENST00000465505 KMT2AQ03164 3969 aa1.19□□□□□ -2.22
SNX4-202ENST00000465505 FREM2Q5SZK8 3169 aa1.19□□□□□ -2.22
SNX4-202ENST00000465505 DMXL2Q8TDJ6 3036 aa1.19□□□□□ -2.22
SNX4-202ENST00000465505 APCP25054 2843 aa1.19□□□□□ -2.22
SNX4-202ENST00000465505 ANKHD1Q8IWZ3 2542 aaKnown RBP1.19□□□□□ -2.22
SNX4-202ENST00000465505 FLNCQ14315 2725 aa1.18□□□□□ -2.22
SNX4-202ENST00000465505 DEFB124Q8NES8 71 aa1.18□□□□□ -2.22
SNX4-202ENST00000465505 LYSTQ99698 3801 aa1.18□□□□□ -2.22
SNX4-202ENST00000465505 DMDP11532 3685 aa1.18□□□□□ -2.22
SNX4-202ENST00000465505 ZNF469Q96JG9 3925 aaPredicted RBP1.17□□□□□ -2.22
SNX4-202ENST00000465505 ACANP16112 2415 aa1.17□□□□□ -2.22
SNX4-202ENST00000465505 DNAH1Q9P2D7 4330 aa1.17□□□□□ -2.22
SNX4-202ENST00000465505 DEFB136Q30KP8 78 aa1.17□□□□□ -2.22
SNX4-202ENST00000465505 PDZD2O15018 2839 aa1.17□□□□□ -2.22
SNX4-202ENST00000465505 ITPR3Q14573 2671 aa1.17□□□□□ -2.22
SNX4-202ENST00000465505 CENPFP49454 3210 aa1.17□□□□□ -2.22
SNX4-202ENST00000465505 LAMA1P25391 3075 aa1.17□□□□□ -2.22
SNX4-202ENST00000465505 DNAH10Q8IVF4 4471 aa1.16□□□□□ -2.22
SNX4-202ENST00000465505 ANK2Q01484 3957 aa1.16□□□□□ -2.22
SNX4-202ENST00000465505 CMYA5Q8N3K9 4069 aa1.16□□□□□ -2.22
SNX4-202ENST00000465505 Q9Y3F1 56 aa1.16□□□□□ -2.22
SNX4-202ENST00000465505 ANK3Q12955 4377 aaKnown RBP1.16□□□□□ -2.22
SNX4-202ENST00000465505 PKHD1L1Q86WI1 4243 aa1.16□□□□□ -2.22
SNX4-202ENST00000465505 SETXQ7Z333 2677 aaKnown RBP1.16□□□□□ -2.22
SNX4-202ENST00000465505 UTRNP46939 3433 aa1.16□□□□□ -2.22
SNX4-202ENST00000465505 DCHS1Q96JQ0 3298 aa1.16□□□□□ -2.22
SNX4-202ENST00000465505 UTP20O75691 2785 aaKnown RBP1.15□□□□□ -2.22
SNX4-202ENST00000465505 WDFY4Q6ZS81 3184 aa1.15□□□□□ -2.22
SNX4-202ENST00000465505 SPENQ96T58 3664 aaKnown RBP1.15□□□□□ -2.23
SNX4-202ENST00000465505 SPTBN5Q9NRC6 3674 aaKnown RBP1.15□□□□□ -2.23
SNX4-202ENST00000465505 HUWE1Q7Z6Z7 4374 aaKnown RBP1.15□□□□□ -2.23
SNX4-202ENST00000465505 FLGP20930 4061 aaPredicted RBP1.14□□□□□ -2.23
SNX4-202ENST00000465505 CFAP46Q8IYW2 2715 aa1.14□□□□□ -2.23
SNX4-202ENST00000465505 H3BNG1 76 aa1.14□□□□□ -2.23
SNX4-202ENST00000465505 CACNA1AO00555 2505 aa1.14□□□□□ -2.23
SNX4-202ENST00000465505 TLN1Q9Y490 2541 aaKnown RBP1.14□□□□□ -2.23
SNX4-202ENST00000465505 SMG1Q96Q15 3661 aaKnown RBP1.13□□□□□ -2.23
SNX4-202ENST00000465505 PKD1P98161 4303 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms