RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 IGKV4-1P06312 121 aa7.58□□□□□ -1.2
MRPL55-225ENST00000465268 DEFB116Q30KQ4 102 aa7.58□□□□□ -1.2
MRPL55-225ENST00000465268 LINC00313P59037 77 aa7.57□□□□□ -1.2
MRPL55-225ENST00000465268 KRTAP9-8Q9BYQ0 159 aa7.56□□□□□ -1.2
MRPL55-225ENST00000465268 LINC00472Q9H8W2 130 aa7.55□□□□□ -1.2
MRPL55-225ENST00000465268 LOC110117498A0A087WWA1 95 aa7.53□□□□□ -1.2
MRPL55-225ENST00000465268 C8orf87E5RJ46 101 aa7.53□□□□□ -1.2
MRPL55-225ENST00000465268 VPS25Q9BRG1 176 aa7.53□□□□□ -1.2
MRPL55-225ENST00000465268 USH2AO75445 5202 aa7.53□□□□□ -1.2
MRPL55-225ENST00000465268 SSPOA2VEC9 5147 aa7.51□□□□□ -1.21
MRPL55-225ENST00000465268 NDUFB1O75438 58 aa7.5□□□□□ -1.21
MRPL55-225ENST00000465268 Q6ZQT0 140 aa7.5□□□□□ -1.21
MRPL55-225ENST00000465268 IGHV6-1A0A0B4J1U7 121 aa7.48□□□□□ -1.21
MRPL55-225ENST00000465268 C9orf118A6NHY6 69 aa7.48□□□□□ -1.21
MRPL55-225ENST00000465268 HRES1P13985 223 aa7.48□□□□□ -1.21
MRPL55-225ENST00000465268 BATFQ16520 125 aa7.48□□□□□ -1.21
MRPL55-225ENST00000465268 A0A1B0GVX0 72 aa7.47□□□□□ -1.21
MRPL55-225ENST00000465268 MPLKIPQ8TAP9 179 aa7.47□□□□□ -1.21
MRPL55-225ENST00000465268 H3BT86 120 aa7.46□□□□□ -1.22
MRPL55-225ENST00000465268 NAA38Q9BRA0 125 aaKnown RBP7.45□□□□□ -1.22
MRPL55-225ENST00000465268 A0A1W2PPM0 123 aa7.43□□□□□ -1.22
MRPL55-225ENST00000465268 MT2AP02795 61 aa7.43□□□□□ -1.22
MRPL55-225ENST00000465268 FAM236DA0A1B0GTK5 79 aa7.41□□□□□ -1.22
MRPL55-225ENST00000465268 FAM236CP0DP71 79 aa7.41□□□□□ -1.22
MRPL55-225ENST00000465268 A8MWP4 228 aa7.4□□□□□ -1.22
MRPL55-225ENST00000465268 NREPQ16612 68 aa7.4□□□□□ -1.22
MRPL55-225ENST00000465268 TAX1BP3O14907 124 aa7.39□□□□□ -1.23
MRPL55-225ENST00000465268 MT1FP04733 61 aa7.39□□□□□ -1.23
MRPL55-225ENST00000465268 C14orf132Q9NPU4 83 aa7.39□□□□□ -1.23
MRPL55-225ENST00000465268 COL5A1-AS1Q5SY13 56 aa7.36□□□□□ -1.23
MRPL55-225ENST00000465268 RBM12B-AS1Q9P1G2 102 aa7.36□□□□□ -1.23
MRPL55-225ENST00000465268 Q8N9P0 234 aaPredicted RBP7.34□□□□□ -1.23
MRPL55-225ENST00000465268 ZCCHC13Q8WW36 166 aaKnown RBP7.34□□□□□ -1.23
MRPL55-225ENST00000465268 LCE2BO14633 110 aa7.33□□□□□ -1.24
MRPL55-225ENST00000465268 SPCS1Q9Y6A9 102 aa7.33□□□□□ -1.24
MRPL55-225ENST00000465268 MTURNQ8N3F0 131 aa7.32□□□□□ -1.24
MRPL55-225ENST00000465268 KRTAP9-3Q9BYQ3 159 aa7.32□□□□□ -1.24
MRPL55-225ENST00000465268 PCP4L1A6NKN8 68 aa7.31□□□□□ -1.24
MRPL55-225ENST00000465268 SPINK7P58062 85 aa7.31□□□□□ -1.24
MRPL55-225ENST00000465268 PRR15Q8IV56 129 aa7.31□□□□□ -1.24
MRPL55-225ENST00000465268 C8orf17Q9NRJ1 99 aa7.31□□□□□ -1.24
MRPL55-225ENST00000465268 FCGBPQ9Y6R7 5405 aaPredicted RBP7.3□□□□□ -1.24
MRPL55-225ENST00000465268 IGKV3D-7A0A0C4DH55 119 aa7.29□□□□□ -1.24
MRPL55-225ENST00000465268 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.28□□□□□ -1.24
MRPL55-225ENST00000465268 KRTAP10-10P60014 251 aa7.28□□□□□ -1.24
MRPL55-225ENST00000465268 Q6ZVQ6 151 aa7.28□□□□□ -1.24
MRPL55-225ENST00000465268 BPY2O14599 106 aa7.26□□□□□ -1.25
MRPL55-225ENST00000465268 TMEM254Q8TBM7 123 aa7.26□□□□□ -1.25
MRPL55-225ENST00000465268 GTF2H5Q6ZYL4 71 aa7.25□□□□□ -1.25
MRPL55-225ENST00000465268 KRTAP19-1Q8IUB9 90 aa7.23□□□□□ -1.25
MRPL55-225ENST00000465268 MRPL34Q9BQ48 92 aaKnown RBP7.23□□□□□ -1.25
MRPL55-225ENST00000465268 hDV103S1A0JD37 113 aa7.22□□□□□ -1.25
MRPL55-225ENST00000465268 K7EP34 96 aa7.22□□□□□ -1.25
MRPL55-225ENST00000465268 KRTAP9-7A8MTY7 169 aa7.21□□□□□ -1.26
MRPL55-225ENST00000465268 UBL5Q9BZL1 73 aa7.21□□□□□ -1.26
MRPL55-225ENST00000465268 WFDC13Q8IUB5 93 aa7.2□□□□□ -1.26
MRPL55-225ENST00000465268 MMP24-AS1A0A0U1RRL7 71 aa7.19□□□□□ -1.26
MRPL55-225ENST00000465268 F8W1H4 67 aa7.18□□□□□ -1.26
MRPL55-225ENST00000465268 K7EQZ3 153 aa7.17□□□□□ -1.26
MRPL55-225ENST00000465268 SMCPP49901 116 aaPredicted RBP7.16□□□□□ -1.26
MRPL55-225ENST00000465268 PRO0461Q9UI25 63 aa7.16□□□□□ -1.26
MRPL55-225ENST00000465268 NDUFS5O43920 106 aa7.14□□□□□ -1.27
MRPL55-225ENST00000465268 CASC2Q6XLA1 102 aa7.12□□□□□ -1.27
MRPL55-225ENST00000465268 MACF1Q9UPN3 7388 aaKnown RBP7.11□□□□□ -1.27
MRPL55-225ENST00000465268 CXCL6P80162 114 aa7.1□□□□□ -1.27
MRPL55-225ENST00000465268 LINC00846Q9NV44 126 aa7.1□□□□□ -1.27
MRPL55-225ENST00000465268 Q5W150 140 aa7.07□□□□□ -1.28
MRPL55-225ENST00000465268 C7orf65Q6ZTY9 151 aa7.07□□□□□ -1.28
MRPL55-225ENST00000465268 SYNE2Q8WXH0 6885 aaKnown RBP7.07□□□□□ -1.28
MRPL55-225ENST00000465268 HCG22E2RYF7 251 aa7.05□□□□□ -1.28
MRPL55-225ENST00000465268 ACYP1P07311 99 aa7.04□□□□□ -1.28
MRPL55-225ENST00000465268 KRTAP19-6Q3LI70 58 aa7.04□□□□□ -1.28
MRPL55-225ENST00000465268 H1FX-AS1Q4G0G2 97 aa7.04□□□□□ -1.28
MRPL55-225ENST00000465268 Q8N9L7 120 aa7.04□□□□□ -1.28
MRPL55-225ENST00000465268 TP53AIP1Q9HCN2 124 aa7.03□□□□□ -1.28
MRPL55-225ENST00000465268 IGKV2D-30A0A075B6S6 120 aa7.02□□□□□ -1.29
MRPL55-225ENST00000465268 IGKV2-30P06310 120 aa7.02□□□□□ -1.29
MRPL55-225ENST00000465268 ETDBQ3ZM63 59 aa7.02□□□□□ -1.29
MRPL55-225ENST00000465268 FAM240AA0A1B0GVK7 77 aa6.97□□□□□ -1.29
MRPL55-225ENST00000465268 ATP5EP2Q5VTU8 51 aa6.95□□□□□ -1.3
MRPL55-225ENST00000465268 A0A1B0GV90 55 aa6.94□□□□□ -1.3
MRPL55-225ENST00000465268 C4orf26Q17RF5 130 aa6.93□□□□□ -1.3
MRPL55-225ENST00000465268 KRTAP3-1Q9BYR8 98 aa6.89□□□□□ -1.31
MRPL55-225ENST00000465268 C5orf47Q569G3 176 aa6.84□□□□□ -1.31
MRPL55-225ENST00000465268 LINC00643Q86TS7 51 aa6.81□□□□□ -1.32
MRPL55-225ENST00000465268 TRAV22A0A0B4J277 110 aa6.8□□□□□ -1.32
MRPL55-225ENST00000465268 LOC101927531A0A1B0GV80 90 aa6.8□□□□□ -1.32
MRPL55-225ENST00000465268 ATOX1O00244 68 aa6.8□□□□□ -1.32
MRPL55-225ENST00000465268 HIST1H4AP62805 103 aaKnown RBP6.79□□□□□ -1.32
MRPL55-225ENST00000465268 J3QR89 54 aa6.78□□□□□ -1.32
MRPL55-225ENST00000465268 UQCRQO14949 82 aa6.78□□□□□ -1.32
MRPL55-225ENST00000465268 C1orf64Q8NEQ6 169 aa6.78□□□□□ -1.32
MRPL55-225ENST00000465268 MT1BP07438 61 aa6.75□□□□□ -1.33
MRPL55-225ENST00000465268 KRTAP6-3Q3LI67 103 aa6.75□□□□□ -1.33
MRPL55-225ENST00000465268 CSAG1Q6PB30 78 aa6.75□□□□□ -1.33
MRPL55-225ENST00000465268 LCA10Q71F78 164 aa6.75□□□□□ -1.33
MRPL55-225ENST00000465268 CYP4F30PQ9H0H9 118 aa6.75□□□□□ -1.33
MRPL55-225ENST00000465268 S4R3F8 94 aa6.75□□□□□ -1.33
MRPL55-225ENST00000465268 FAM236AA0A1B0GUQ0 79 aa6.72□□□□□ -1.33
MRPL55-225ENST00000465268 FAM236BA0A1B0GV22 79 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms